EY720729

Overview
NameEY720729
Unique NameEY720729
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length851
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720729 vs. ExPASy Swiss-Prot
Match: NRAM1_ARATH (Metal transporter Nramp1 OS=Arabidopsis thaliana GN=NRAMP1 PE=2 SV=1)

HSP 1 Score: 280.796 bits (717), Expect = 6.192e-85
Identity = 145/184 (78.80%), Postives = 154/184 (83.70%), Query Frame = 3
Query:  255 IHRKTSWKNLFAYIGPGFLVSIAYIDPGNFETDLQSGAQYKYELLWIILVASCAALIIQSLAANLGVVTGKHLAEHCRNEYPKVPNFILWVLAEIAIVACDIPEVIGTAFALNMLFXIPVWIGVLLTGFSTLILLALQQ*WVRKLEFLIAFLVFPWADAFLRSLGMQTRNK-RSLHGLFGPSLK 803
            +  K SWKN FAY+GPGFLVSIAYIDPGNFETDLQ+GA YKYELLWIILVASCAAL+IQSLAANLGVVTGKHLAE CR EY KVPNF+LWV+AEIA+VACDIPEVIGTAFALNMLF IPVWIGVLLTG STLILLALQ+  VRKLEFLIAFLVF  A  F   L     +    LHGLF P LK
Sbjct:   37 VSEKKSWKNFFAYLGPGFLVSIAYIDPGNFETDLQAGAHYKYELLWIILVASCAALVIQSLAANLGVVTGKHLAEQCRAEYSKVPNFMLWVVAEIAVVACDIPEVIGTAFALNMLFSIPVWIGVLLTGLSTLILLALQKYGVRKLEFLIAFLVFTIAICFFVELHYSKPDPGEVLHGLFVPQLK 220          

HSP 2 Score: 55.8398 bits (133), Expect = 6.192e-85
Identity = 24/39 (61.54%), Postives = 35/39 (89.74%), Query Frame = 2
Query:   59 MAASATGQPQFIASTGGNRSFSNAPLIKNEDADQIVVPD 175
            MAA+ +G+ QFI+S+GGNRSFSN+PLI+N D++QI+V +
Sbjct:    1 MAATGSGRSQFISSSGGNRSFSNSPLIENSDSNQIIVSE 39          
BLAST of EY720729 vs. ExPASy Swiss-Prot
Match: NRAM6_ARATH (Metal transporter Nramp6 OS=Arabidopsis thaliana GN=NRAMP6 PE=2 SV=2)

HSP 1 Score: 286.189 bits (731), Expect = 3.053e-81
Identity = 147/184 (79.89%), Postives = 157/184 (85.33%), Query Frame = 3
Query:  255 IHRKTSWKNLFAYIGPGFLVSIAYIDPGNFETDLQSGAQYKYELLWIILVASCAALIIQSLAANLGVVTGKHLAEHCRNEYPKVPNFILWVLAEIAIVACDIPEVIGTAFALNMLFXIPVWIGVLLTGFSTLILLALQQ*WVRKLEFLIAFLVFPWADAFLRSLGMQTRN-KRSLHGLFGPSLK 803
            +  K SWKN F+Y+GPGFLVSIAYIDPGNFETDLQSGAQYKYELLWIILVASCAAL+IQSLAANLGVVTGKHLAEHCR EY KVPNF+LWV+AEIA+VACDIPEVIGTAFALNMLF IPVWIGVLLTG STLILLALQQ  +RKLEFLIAFLVF  A  F   L     + K  L+GLF P LK
Sbjct:   29 VPEKKSWKNFFSYLGPGFLVSIAYIDPGNFETDLQSGAQYKYELLWIILVASCAALVIQSLAANLGVVTGKHLAEHCRAEYSKVPNFMLWVVAEIAVVACDIPEVIGTAFALNMLFNIPVWIGVLLTGLSTLILLALQQYGIRKLEFLIAFLVFTIALCFFVELHYSKPDPKEVLYGLFVPQLK 212          

HSP 2 Score: 38.1206 bits (87), Expect = 3.053e-81
Identity = 15/26 (57.69%), Postives = 23/26 (88.46%), Query Frame = 2
Query:   98 STGGNRSFSNAPLIKNEDADQIVVPD 175
            ++G NRS SN+PLI+N D++QI+VP+
Sbjct:    6 ASGSNRSISNSPLIENSDSNQILVPE 31          
BLAST of EY720729 vs. ExPASy Swiss-Prot
Match: NRAM2_MOUSE (Natural resistance-associated macrophage protein 2 OS=Mus musculus GN=Slc11a2 PE=1 SV=2)

HSP 1 Score: 167.933 bits (424), Expect = 6.310e-41
Identity = 86/179 (48.04%), Postives = 122/179 (68.16%), Query Frame = 3
Query:  270 SWKNLFAYIGPGFLVSIAYIDPGNFETDLQSGAQYKYELLWIILVASCAALIIQSLAANLGVVTGKHLAEHCRNEYPKVPNFILWVLAEIAIVACDIPEVIGTAFALNMLF--XIPVWIGVLLTGFSTLILLALQQ*WVRKLEFLIAFLVFPWADAF-LRSLGMQTRNKRSLHGLFGPS 797
            S++ L+A+ GPGFL+SIAY+DPGN E+DLQSGA   ++LLW++L+A+   L++Q LAA LGVVTG HLAE C  +YPKVP  ILW++ E+AI+  D+ EVIG+A A+N+L    +P+W GVL+T   T + L L +  +RKLE    FL+   A  F    + ++    + L G+F PS
Sbjct:   66 SFRKLWAFTGPGFLMSIAYLDPGNIESDLQSGAVAGFKLLWVLLLATIVGLLLQRLAARLGVVTGLHLAEVCHRQYPKVPRIILWLMVELAIIGSDMQEVIGSAIAINLLSAGRVPLWGGVLITIADTFVFLFLDKYGLRKLEAFFGFLITIMALTFGYEYITVKPSQSQVLRGMFVPS 244          
BLAST of EY720729 vs. ExPASy Swiss-Prot
Match: NRAM2_HUMAN (Natural resistance-associated macrophage protein 2 OS=Homo sapiens GN=SLC11A2 PE=1 SV=2)

HSP 1 Score: 167.548 bits (423), Expect = 8.241e-41
Identity = 88/179 (49.16%), Postives = 122/179 (68.16%), Query Frame = 3
Query:  270 SWKNLFAYIGPGFLVSIAYIDPGNFETDLQSGAQYKYELLWIILVASCAALIIQSLAANLGVVTGKHLAEHCRNEYPKVPNFILWVLAEIAIVACDIPEVIGTAFALNMLF--XIPVWIGVLLTGFSTLILLALQQ*WVRKLEFLIAFLVFPWADAF-LRSLGMQTRNKRSLHGLFGPS 797
            S++ L+A+ GPGFL+SIAY+DPGN E+DLQSGA   ++LLWI+L+A+   L++Q LAA LGVVTG HLAE C  +YPKVP  ILW++ E+AI+  D+ EVIG+A A+N+L    IP+W GVL+T   T + L L +  +RKLE    FL+   A  F    + ++    + L G+F PS
Sbjct:   66 SFRKLWAFTGPGFLMSIAYLDPGNIESDLQSGAVAGFKLLWILLLATLVGLLLQRLAARLGVVTGLHLAEVCHRQYPKVPRVILWLMVELAIIGSDMQEVIGSAIAINLLSVGRIPLWGGVLITIADTFVFLFLDKYGLRKLEAFFGFLITIMALTFGYEYVTVKPSQSQVLKGMFVPS 244          
BLAST of EY720729 vs. ExPASy Swiss-Prot
Match: NRAM1_DICDI (Metal transporter nramp1 homolog OS=Dictyostelium discoideum GN=nramp1 PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 5.342e-40
Identity = 83/172 (48.26%), Postives = 114/172 (66.28%), Query Frame = 3
Query:  237 VFKLPQIHRKTS----WKNLFAYIGPGFLVSIAYIDPGNFETDLQSGAQYKYELLWIILVASCAALIIQSLAANLGVVTGKHLAEHCRNEYPKVPNFILWVLAEIAIVACDIPEVIGTAFALNMLF--XIPVWIGVLLTGFSTLILLALQQ*WVRKLEFLIAFLVFPWADAF 734
            + K+P I +  S    +K L+A+ GPGFL+SIAY+DPGN E+D+Q+GA   Y+LLW++  ++     +Q LA+ LGVVTGKHLAEHCR +YPK P  +LW++ E+AI+  DI EVIGTA AL +L    IP+W GVL T   T   L L++  +RKLE     L+   A +F
Sbjct:   55 LIKVPNIDKPDSKWINFKTLWAFTGPGFLMSIAYLDPGNLESDIQAGAMAGYQLLWVLFWSTVIGFWLQMLASRLGVVTGKHLAEHCREQYPKTPRLLLWLMTELAIIGSDIQEVIGTAIALQILSNGHIPLWAGVLFTAADTFTFLFLEKYGIRKLEAFFCSLIAIMAISF 226          
BLAST of EY720729 vs. ExPASy Swiss-Prot
Match: NRAM2_RAT (Natural resistance-associated macrophage protein 2 OS=Rattus norvegicus GN=Slc11a2 PE=1 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 9.112e-40
Identity = 85/179 (47.49%), Postives = 122/179 (68.16%), Query Frame = 3
Query:  270 SWKNLFAYIGPGFLVSIAYIDPGNFETDLQSGAQYKYELLWIILVASCAALIIQSLAANLGVVTGKHLAEHCRNEYPKVPNFILWVLAEIAIVACDIPEVIGTAFALNMLF--XIPVWIGVLLTGFSTLILLALQQ*WVRKLEFLIAFLVFPWADAF-LRSLGMQTRNKRSLHGLFGPS 797
            S++ L+A+ GPGFL+SIAY+DPGN E+DLQSGA   ++LLW++L+A+   L++Q LAA LGVVTG HLAE C  +YPKVP  ILW++ E+AI+  D+ EVIG+A A+N+L    +P++ GVL+T   T + L L +  +RKLE    FL+   A  F    + ++    + L G+F PS
Sbjct:   66 SFRKLWAFTGPGFLMSIAYLDPGNIESDLQSGAVAGFKLLWVLLLATIVGLLLQRLAARLGVVTGLHLAEVCHRQYPKVPRIILWLMVELAIIGSDMQEVIGSAIAINLLSAGRVPLYGGVLITIADTFVFLFLDKYGLRKLEAFFGFLITIMALTFGYEYVTVKPSQSQVLRGMFVPS 244          
BLAST of EY720729 vs. ExPASy Swiss-Prot
Match: MVL_DROME (Protein Malvolio OS=Drosophila melanogaster GN=Mvl PE=2 SV=2)

HSP 1 Score: 163.31 bits (412), Expect = 1.554e-39
Identity = 87/184 (47.28%), Postives = 122/184 (66.30%), Query Frame = 3
Query:  270 SWKNLFAYIGPGFLVSIAYIDPGNFETDLQSGAQYKYELLWIILVASCAALIIQSLAANLGVVTGKHLAEHCRNEYPKVPNFILWVLAEIAIVACDIPEVIGTAFALNMLF--XIPVWIGVLLTGFSTLILLALQQ*WVRKLEFLIAFLVFPWADAFLRSLGMQTRNK-RSLHGLFGPSLKEWC 812
            S++ L+A+ GPGFL+SIAY+DPGN E+D+QSGA  KY++LW++L A+   L++Q LAA LGVVTG HLAE C  +Y ++P +ILW++ EIAI+  D+ EVIGTA A+ +L    +P+W GVL+T   T   L L +  +RKLEFL   L+   A +F     +   N+   L G+F P    WC
Sbjct:   73 SFRKLWAFTGPGFLMSIAYLDPGNIESDMQSGAAAKYKILWVLLWATVLGLLMQRLAARLGVVTGLHLAEMCYRQYKRLPRWILWIMIEIAIIGSDMQEVIGTAIAIYLLSNKVVPLWGGVLITIVDTFTFLFLDKYGLRKLEFLFGTLITIMAVSFGYEYIVSAPNQGEVLEGMFVP----WC 252          
BLAST of EY720729 vs. ExPASy Swiss-Prot
Match: NRAM4_ARATH (Metal transporter Nramp4 OS=Arabidopsis thaliana GN=NRAMP4 PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 4.522e-39
Identity = 79/164 (48.17%), Postives = 110/164 (67.07%), Query Frame = 3
Query:  264 KTSWKNLFAYIGPGFLVSIAYIDPGNFETDLQSGAQYKYELLWIILVASCAALIIQSLAANLGVVTGKHLAEHCRNEYPKVPNFILWVLAEIAIVACDIPEVIGTAFALNMLF--XIPVWIGVLLTGFSTLILLALQQ*WVRKLEFLIAFLVFPWADAFLRSLG 749
            K SWK L+ + GPGFL+SIA++DPGN E+DLQ+GA   Y L+W+++ A+   L+IQ L+A LGV TG+HLAE CR EYP     +LW++AEIA++  DI EVIG+A A+ +L    +P+W GV++T     I L L+   +RKLE + A L+   A AF    G
Sbjct:   46 KFSWKKLWLFTGPGFLMSIAFLDPGNLESDLQAGAIAGYSLIWLLMWATAIGLLIQLLSARLGVATGRHLAELCREEYPTWARMVLWIMAEIALIGADIQEVIGSAIAIKILSNGLVPLWAGVVITALDCFIFLFLENYGIRKLEAVFAILIATMALAFAWMFG 209          
BLAST of EY720729 vs. ExPASy Swiss-Prot
Match: MNTH_RHILO (Probable manganese transport protein mntH OS=Rhizobium loti GN=mntH PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 8.528e-38
Identity = 77/176 (43.75%), Postives = 118/176 (67.05%), Query Frame = 3
Query:  273 WKNLFAYIGPGFLVSIAYIDPGNFETDLQSGAQYKYELLWIILVASCAALIIQSLAANLGVVTGKHLAEHCRNEYPKVPNFILWVLAEIAIVACDIPEVIGTAFALNMLFXIPVWIGVLLTGFSTLILLALQQ*WVRKLE-FLIAFLVFPWADAFLRSLGMQTRNKRSLHGLFGPS 797
            ++ LFA++GPG++VS+ Y+DPGN+ TDL  GAQ+ Y LL++I++++  A+++Q+LAA LG+ TG+ LA+ CR  YP+  NF+LW+  E+AI+ACD+ EVIGTA AL +LF IP+  G +LT     ++L L     R LE F+IA L+  ++   ++           LH +F PS
Sbjct:   42 FRRLFAFMGPGYMVSVGYMDPGNWATDLAGGAQFGYTLLFVIMLSNLMAILLQALAARLGIATGRDLAQACRAYYPRPVNFVLWIACELAIIACDLAEVIGTAIALKLLFGIPLIGGAILTALDAFLVLLLMNKGFRYLEAFVIALLIIIFSCFAIQIFVAAPPAGTILHSMFVPS 217          
BLAST of EY720729 vs. ExPASy Swiss-Prot
Match: NRAM5_ARATH (Metal transporter Nramp5 OS=Arabidopsis thaliana GN=NRAMP5 PE=2 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 1.114e-37
Identity = 80/175 (45.71%), Postives = 115/175 (65.71%), Query Frame = 3
Query:  270 SWKNLFAYIGPGFLVSIAYIDPGNFETDLQSGAQYKYELLWIILVASCAALIIQSLAANLGVVTGKHLAEHCRNEYPKVPNFILWVLAEIAIVACDIPEVIGTAFALNMLF--XIPVWIGVLLTGFSTLILLALQQ*WVRKLEFLIAFLVFPWADAFLRSLGMQTRNKRSLHGLF 788
            SW  L+ + GPGFL+SIA++DPGN E DLQ+GA   Y LLW++L A+   L++Q L+A +GV TG+HLAE CR+EYP     +LW +AE+A++  DI EVIG+A AL +L    +P+W+GV++T F   ++  L++  +RKLE L A L+   A +F     M    K S+  LF
Sbjct:   66 SWAKLWKFTGPGFLMSIAFLDPGNIEGDLQAGAVAGYSLLWLLLWATLMGLLMQLLSARIGVATGRHLAEICRSEYPSWARILLWFMAEVALIGADIQEVIGSAIALQILTRGFLPIWVGVIITSFDCFLISYLEKCGMRKLEGLFAVLIATMALSF---AWMFNETKPSVEELF 237          
The following BLAST results are available for this feature:
BLAST of EY720729 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 139
Match NameE-valueIdentityDescription
NRAM1_ARATH6.192e-8578.80Metal transporter Nramp1 OS=Arabidopsis thaliana G... [more]
NRAM6_ARATH3.053e-8179.89Metal transporter Nramp6 OS=Arabidopsis thaliana G... [more]
NRAM2_MOUSE6.310e-4148.04Natural resistance-associated macrophage protein 2... [more]
NRAM2_HUMAN8.241e-4149.16Natural resistance-associated macrophage protein 2... [more]
NRAM1_DICDI5.342e-4048.26Metal transporter nramp1 homolog OS=Dictyostelium ... [more]
NRAM2_RAT9.112e-4047.49Natural resistance-associated macrophage protein 2... [more]
MVL_DROME1.554e-3947.28Protein Malvolio OS=Drosophila melanogaster GN=Mvl... [more]
NRAM4_ARATH4.522e-3948.17Metal transporter Nramp4 OS=Arabidopsis thaliana G... [more]
MNTH_RHILO8.528e-3843.75Probable manganese transport protein mntH OS=Rhizo... [more]
NRAM5_ARATH1.114e-3745.71Metal transporter Nramp5 OS=Arabidopsis thaliana G... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-013-E08-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720729 ID=EY720729; Name=EY720729; organism=Citrus sinensis; type=EST; length=851bp
CACGCGTCCGCCTTACTATTTTCTGTTTGTTTCTCGAGAAAATAATTGAA
GGGTGGCTATGGCGGCTTCAGCCACTGGGCAGCCCCAGTTCATTGCTAGC
ACTGGCGGTAACCGGAGCTTCTCAAATGCACCACTCATTAAGAACGAAGA
TGCTGACCAAATTGTTGTGCCCGATATTGTCCAGGAAAAAGAGAGAGAGA
GAAAAAAGGTGGTCATTGCTGCTATGGGGATGCAAAGTTTTTAAATTGCC
ACAAATTCATAGAAAGACAAGCTGGAAAAACTTATTTGCTTACATAGGCC
CTGGATTCCTTGTTTCCATAGCATATATAGATCCTGGAAATTTTGAAACG
GATCTGCAGTCAGGAGCACAGTACAAGTACGAGTTACTCTGGATCATTTT
AGTGGCTTCATGTGCGGCTCTTATAATTCAGTCTCTAGCAGCCAATCTCG
GGGTTGTCACGGGAAAGCATTTGGCAGAGCACTGTAGAAATGAATACCCT
AAGGTGCCGAACTTCATATTATGGGTTCTTGCTGAAATTGCTATAGTCGC
GTGTGACATACCAGAAGTGATCGGAACAGCCTTCGCATTGAATATGCTCT
TCANAATTCCAGTGTGGATCGGTGTGCTTCTAACTGGGTTCAGTACTTTG
ATTCTCCTGGCATTGCAGCAATAATGGGTTAGGAAGCTTGAATTTTTGAT
TGCTTTCCTTGTATTTCCATGGGCGGATGCTTTTTTGCGGAGCTTGGGTA
TGCAAACCCGAAACAAAAGAAGTCTGCATGGACTTTTCGGTCCCTCACTT
AAGGAATGGTGCTAATGGTCTCCCAGTCCGCTTCCGGGGGCTGGGTATGC
C
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