CK936384

Overview
NameCK936384
Unique NameCK936384
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length712
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CK936384 vs. ExPASy Swiss-Prot
Match: CPD_ARATH (Cyclic phosphodiesterase OS=Arabidopsis thaliana GN=At4g18930 PE=1 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 4.508e-60
Identity = 112/177 (63.28%), Postives = 134/177 (75.71%), Query Frame = 2 
Query:   11 KKGFYSVWAIPPDEVRARVKKLMEGLRSELGGPQFDPHVTVVGAMSLTADDALEKFKSACNGLKAYNCTVNRVATGTFFYQCVFLLLHPTPEVAEPSSHCCGHFGYKSSTPYMPHLSLLYGDLTDDEKKIAQEKAHKLDESIGSLSFPITRLQLWKTDTEDTTLKSWEMVAECNLSP 541
            KK  YSVWA+P +E   R KKLME LRSE  GP+F PHVTV  +  LTAD+A + F+SAC+GLKAY  TV+RV+TGTFF+QCVFLLL  TPEV E   HC  HF   ++TPYMPHLSLLY +LT++EKK AQEKA+ LD S+  LSF + RL L KTDTED TL++WE VA CNL+P
Sbjct:    5 KKDVYSVWALPDEESEPRFKKLMEALRSEFTGPRFVPHVTVAVSAYLTADEAKKMFESACDGLKAYTATVDRVSTGTFFFQCVFLLLQTTPEVMEAGEHCKNHFNCSTTTPYMPHLSLLYAELTEEEKKNAQEKAYTLDSSLDGLSFRLNRLALCKTDTEDKTLETWETVAVCNLNP 181
The following BLAST results are available for this feature:
BLAST of CK936384 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
CPD_ARATH4.508e-6063.28Cyclic phosphodiesterase OS=Arabidopsis thaliana G... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004383_A03 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0003_IF_A03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936384 ID=CK936384; Name=CK936384; organism=Citrus sinensis; type=EST; length=712bp
TGATAAAAACAAAAAGGGTTTTTATTCTGTGTGGGCGATTCCACCTGATG
AGGTGAGGGCGAGGGTGAAGAAGTTGATGGAGGGTCTGAGGTCCGAGTTA
GGTGGGCCCCAGTTCGACCCGCATGTTACTGTTGTTGGGGCCATGAGTCT
GACGGCGGATGATGCGTTGGAGAAGTTTAAATCAGCGTGTAACGGGCTTA
AGGCGTATAACTGTACTGTGAATCGGGTGGCCACTGGGACTTTCTTTTAC
CAGTGTGTTTTTCTGCTGCTTCATCCCACCCCTGAGGTGGCGGAACCTAG
CTCACATTGCTGTGGCCATTTTGGTTACAAATCCTCCACACCTTACATGC
CACATTTGAGCCTCCTTTACGGGGACCTCACAGATGATGAAAAGAAGATT
GCACAAGAAAAAGCTCACAAACTTGATGAAAGCATTGGCAGTTTGAGCTT
CCCAATCACTCGCCTTCAATTGTGGAAGACAGACACAGAGGATACCACTC
TCAAGTCTTGGGAGATGGTTGCTGAATGCAACTTGAGCCCAGATTAGCTC
TTTTTGTGGTCCCTGATTTGAATAACTAGCATTATCTTTCTTTTTTTCTT
TNNNTTTNNNGGGGTGGGGAGTTGGTTGATACTGATCTGATCTCCNNNAT
GATGGTATACAATAATAAAGCACCCCCATCTTGCGCAAAAAAAAAAAANN
NAAAAAANNNAA
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