CK936361
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK936361 vs. ExPASy Swiss-Prot
Match: BLM_HUMAN (Bloom syndrome protein OS=Homo sapiens GN=BLM PE=1 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 3.502e-52 Identity = 110/247 (44.53%), Postives = 147/247 (59.51%), Query Frame = 1 Query: 100 HEKEALVKLLRWHFGHAQFRDKQLDAIQAVLSGRDCFCLMPTGGGKSMCYQIPALAKPGIVLVVSPLIALMENQVIGLKEKGIAGEFLSSTQTMQVKTKIYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKXXXXXXXXXXCSVLKSNGDTCAIVYCL 837 H KE ++K+ FG FR QL+AI A L G DCF LMPTGGGKS+CYQ+PA PG+ +V+SPL +L+ +QV L I +L+ +T T IY L P ++LLYVTPE + A+ +S L+ ++ R LL IDEAHC+S WGHDFR Y++++ LR P VP++ALTATA P+VQKD++ L + P V SFNR NL Y V K + K + I+YCL Sbjct: 651 HTKE-MMKIFHKKFGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSPGVTVVISPLRSLIVDQVQKLTSLDIPATYLTGDKTDSEATNIYLQLSKKDPIIKLLYVTPEKICASNRLISTLENLYERKLLARFVIDEAHCVSQWGHDFRQDYKRMNMLRQKFPSVPVMALTATANPRVQKDILTQLKILRPQVFSMSFNRHNLKYYVLPKKPKKVAFDCLEWIRKHHPYDSGIIYCL 896
BLAST of CK936361 vs. ExPASy Swiss-Prot
Match: BLM_XENLA (Bloom syndrome protein homolog OS=Xenopus laevis GN=blm PE=2 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 7.803e-52 Identity = 107/247 (43.32%), Postives = 148/247 (59.92%), Query Frame = 1 Query: 100 HEKEALVKLLRWHFGHAQFRDKQLDAIQAVLSGRDCFCLMPTGGGKSMCYQIPALAKPGIVLVVSPLIALMENQVIGLKEKGIAGEFLSSTQTMQVKTKIYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKXXXXXXXXXXCSVLKSNGDTCAIVYCL 837 H KE ++K+ FG +FR QL+AI A L G DCF LMPTGGGKS+CYQ+P PG+ +V+SPL +L+ +QV L I +L+ +T IY L P ++LLYVTPE + A+ +S ++ ++ R LL IDEAHC+S WGHDFRP Y++L+ LR VP++ALTATA P+V+KD++ L + P + SFNR NL YEV K + K + + I+YCL Sbjct: 603 HSKE-MMKIFHKKFGLHRFRTNQLEAINACLCGEDCFILMPTGGGKSLCYQLPGCISPGVTIVISPLRSLIVDQVQKLTSLDIPATYLTGDKTDAEAASIYLQLSKKDPIIKLLYVTPEKVCASTRLISTMENLYERQLLARFVIDEAHCVSQWGHDFRPDYKRLNVLRQKFQSVPMMALTATANPRVKKDILNQLKMTKPQIFTMSFNRDNLKYEVLPKKPKRVALDCVEWIKKHHPNDSGIIYCL 848
BLAST of CK936361 vs. ExPASy Swiss-Prot
Match: BLM_CHICK (Bloom syndrome protein homolog (Fragment) OS=Gallus gallus GN=BLM PE=2 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 7.803e-52 Identity = 113/271 (41.70%), Postives = 157/271 (57.93%), Query Frame = 1 Query: 55 LAMQSTSQTQKNKPLHEK---------EALVKLLRWHFGHAQFRDKQLDAIQAVLSGRDCFCLMPTGGGKSMCYQIPALAKPGIVLVVSPLIALMENQVIGLKEKGIAGEFLSSTQTMQVKTKIYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKXXXXXXXXXXCSVLKSNGDTCAIVYCL 837 ++++S+S+ + P HE+ E ++K+ FG FR QL+AI A L G DCF LMPTGGGKS+CYQ+PA G+ +V+SPL +L+ +QV LK IA +L+ T +K Y L P ++LLYVTPE + A+ +S L+ ++ R LL IDEAHC+S WGHDFR Y++L+ LR VP++ALTATA P+VQKD+ L + P V SFNR NL Y+V K + K + I+YCL Sbjct: 356 ISVKSSSEPLVHNPAHERFRGMKFSHSEEMLKIFHRKFGLHSFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSAGVTVVISPLRSLIIDQVQKLKTLDIAATYLTGDITDADASKTYMQLSKKDPIIKLLYVTPEKVCASNRLLSALENLYDRKLLARFVIDEAHCVSQWGHDFRKDYKRLNMLRKKFHSVPMMALTATANPRVQKDIQNQLEMLKPQVFTMSFNRHNLKYDVLPKKPKKVAMDCLEWIKKYHPHDSGIIYCL 626
BLAST of CK936361 vs. ExPASy Swiss-Prot
Match: BLM_MOUSE (Bloom syndrome protein homolog OS=Mus musculus GN=Blm PE=1 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 1.738e-51 Identity = 109/247 (44.13%), Postives = 146/247 (59.11%), Query Frame = 1 Query: 100 HEKEALVKLLRWHFGHAQFRDKQLDAIQAVLSGRDCFCLMPTGGGKSMCYQIPALAKPGIVLVVSPLIALMENQVIGLKEKGIAGEFLSSTQTMQVKTKIYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKXXXXXXXXXXCSVLKSNGDTCAIVYCL 837 H KE ++K+ FG FR QL+AI A L G DCF LMPTGGGKS+CYQ+PA PG+ +V+SPL +L+ +QV L I +L+ +T IY L P ++LLYVTPE + A+ +S L+ ++ R LL IDEAHC+S WGHDFR Y++++ LR P VP++ALTATA P+VQKD++ L + P V SFNR NL Y V K + K + I+YCL Sbjct: 659 HTKE-MMKIFHKKFGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSPGVTIVISPLRSLIVDQVQKLTSFDIPATYLTGDKTDSEAANIYLQLSKKDPIIKLLYVTPEKVCASNRLISTLENLYERKLLARFVIDEAHCVSQWGHDFRQDYKRMNMLRQKFPSVPVMALTATANPRVQKDILTQLKILRPQVFSMSFNRHNLKYYVLPKKPKKVAFDCLEWIRKHHPYDSGIIYCL 904
BLAST of CK936361 vs. ExPASy Swiss-Prot
Match: BLM_CAEEL (Bloom syndrome protein homolog OS=Caenorhabditis elegans GN=him-6 PE=2 SV=2) HSP 1 Score: 200.29 bits (508), Expect = 1.127e-50 Identity = 108/214 (50.47%), Postives = 139/214 (64.95%), Query Frame = 1 Query: 115 LVKLLRWHFGHAQFRDKQLDAIQAVLSGRDCFCLMPTGGGKSMCYQIPALAKPGIVLVVSPLIALMENQVIGLKEKGIAGEFLSSTQTMQVKTKIYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNYL--PDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV 747 L L+ FG QFR +Q I + L G D F LMPTG GKS+CYQ+PA+ PG+ +VVSPL +L+E+Q + +KE GI E L++ + KIY +L SG PS++LLYVTPE ++A+ S +H RGLL IDEAHC+S WGHDFRP Y KLSSLR P VPI+ALTATA PK+ D + L +QN + SSF R NL Y++ Sbjct: 235 LYDTLKSKFGFNQFRHRQKQCILSTLMGHDTFVLMPTGAGKSLCYQLPAVILPGVTVVVSPLRSLIEDQKMKMKELGIGCEALTADLGAPAQEKIYAELGSGNPSIKLLYVTPEKISASGRLNSVFFDLHRRGLLARFVIDEAHCVSQWGHDFRPDYTKLSSLREKYANPPVPIIALTATATPKIVTDARDHLKMQNSKLFISSFVRDNLKYDL 448
BLAST of CK936361 vs. ExPASy Swiss-Prot
Match: BLM_DROME (Bloom syndrome protein homolog OS=Drosophila melanogaster GN=mus309 PE=1 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 1.246e-49 Identity = 104/238 (43.70%), Postives = 139/238 (58.40%), Query Frame = 1 Query: 127 LRWHFGHAQFRDKQLDAIQAVLSGRDCFCLMPTGGGKSMCYQIPALAKPGIVLVVSPLIALMENQVIGLKEKGIAGEFLSSTQTMQVKTKIYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKXXXXXXXXXXCSVLKSNGDTCAIVYCL 837 L + FG FR QL I A L G DCF LMPTGGGKS+CYQ+PA+ G+ +V+SPL +L+ +Q+ L I + LS Q M IY DL+S P ++LLYVTPE ++++ F L ++S ++ IDEAHC+S WGHDFRP Y+KL L+ P+VP +ALTATA P+V+ D++ L L+N SSFNR NL Y V K + I+YCL Sbjct: 729 LSYSFGLKSFRPNQLQVINATLLGNDCFVLMPTGGGKSLCYQLPAILTEGVTIVISPLKSLIFDQINKLASLDICAKSLSGEQKMADVMAIYRDLESQPPMVKLLYVTPEKISSSARFQDTLDTLNSNNYISRFVIDEAHCVSQWGHDFRPDYKKLGVLKKRFPNVPTIALTATATPRVRLDILAQLNLKNCKWFLSSFNRSNLRYRVLPKKGVSTLDDISRYIRSKPQHFSGIIYCL 966
BLAST of CK936361 vs. ExPASy Swiss-Prot
Match: HUS2_SCHPO (ATP-dependent DNA helicase hus2/rqh1 OS=Schizosaccharomyces pombe GN=rqh1 PE=1 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 1.377e-48 Identity = 114/279 (40.86%), Postives = 164/279 (58.78%), Query Frame = 1 Query: 16 RILFVXKKMKKSPLAMQSTSQTQKNKPLHEKEALVKLLRWHFGHAQFRDKQLDAIQAVLSGRDCFCLMPTGGGKSMCYQIPAL----AKPGIVLVVSPLIALMENQVIGLKEKGIAGEFLSSTQTMQVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSK-LKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKXXXXXXXXXXCSVLKSNGDTCAIVYCL 837 R L K K + M S + P ++ ++ L+ F FR QL+AI LSG+D F LMPTGGGKS+CYQ+PA+ A G+ LV+SPL++LM++Q+ L++ I LS Q + ++ L + ++LLYVTPE A+ G +++ LK ++ R LL + IDEAHC+S WGHDFRP Y++L LR+ +P +ALTATA V+KD++ +L ++N L LKSSFNRPNLFYE++ K S + I+YCL Sbjct: 476 RPLLGEMKDKNHKVLMPSLDDPMLSYPWSKE--VLGCLKHKFHLKGFRKNQLEAINGTLSGKDVFILMPTGGGKSLCYQLPAVIEGGASRGVTLVISPLLSLMQDQLDHLRKLNIPSLPLSGEQPADERRQVISFLMAKNVLVKLLYVTPEGLASNGAITRVLKSLYERKLLARIVIDEAHCVSHWGHDFRPDYKQLGLLRDRYQGIPFMALTATANEIVKKDIINTLRMENCLELKSSFNRPNLFYEIKPKKDLYTELYRFIS--NGHLHESGIIYCL 750
BLAST of CK936361 vs. ExPASy Swiss-Prot
Match: RECQ1_RAT (ATP-dependent DNA helicase Q1 OS=Rattus norvegicus GN=Recql PE=2 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 1.799e-48 Identity = 95/212 (44.81%), Postives = 140/212 (66.04%), Query Frame = 1 Query: 124 LLRWHFGHAQFRDKQLDAIQAVLSGRDCFCLMPTGGGKSMCYQIPALAKPGIVLVVSPLIALMENQVIGLKEKGIAGEFLSSTQTMQVKTKIYEDLDSGKPSLRLLYVTPELTA-TPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYK 756 +LR F +FR QL+ + A ++ +D F +MPTGGGKS+CYQ+PAL G LV+ PLI+LME+Q++ L++ GI+ L+S+ + + ++ ++ + L+L+YVTPE A + FMS+L+K + G L VA+DE HC S WGHDFRP Y+ L L+ P++ ++ LTATA V KD + LC++ L +SFNRPNL+YEVR K Sbjct: 82 VLRDVFKLQKFRPLQLETVNATMARKDIFLVMPTGGGKSLCYQLPALCSDGFTLVICPLISLMEDQLMVLQQLGISATMLNSSSSKEHVKCVHTEMMNKNSHLKLIYVTPEKIAKSKMFMSRLEKAYEAGRLTGVAVDEVHCCSQWGHDFRPDYKALGILKRQFPNISLIGLTATATNHVLKDAQKILCVEKCLTFTASFNRPNLYYEVRQK 293
BLAST of CK936361 vs. ExPASy Swiss-Prot
Match: RECQ1_MOUSE (ATP-dependent DNA helicase Q1 OS=Mus musculus GN=Recql PE=1 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 5.234e-48 Identity = 94/203 (46.31%), Postives = 134/203 (66.01%), Query Frame = 1 Query: 151 QFRDKQLDAIQAVLSGRDCFCLMPTGGGKSMCYQIPALAKPGIVLVVSPLIALMENQVIGLKEKGIAGEFLSSTQTMQVKTKIYEDLDSGKPSLRLLYVTPELTA-TPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYK 756 +FR QL+ I ++ +D F +MPTGGGKS+CYQ+PAL G LV+ PLI+LME+Q++ LK+ GI+ L+++ + + ++ ++ + L+L+YVTPE A + FMS+L+K + G L VA+DE HC S WGHDFRP Y+ L L+ P+ ++ LTATA V KDV + LC+ L +SFNRPNLFYEVR K Sbjct: 91 KFRPLQLETINVTMARKDIFLVMPTGGGKSLCYQLPALCSDGFTLVICPLISLMEDQLMVLKQLGISATMLNASSSKEHVKWVHAEMVNKNSQLKLIYVTPEKIAKSKMFMSRLEKAYEAGRLTGVAVDEVHCCSQWGHDFRPDYKALGILKRQFPNASLMGLTATATNHVLKDVQKILCVGKCLTFTASFNRPNLFYEVRQK 293
BLAST of CK936361 vs. ExPASy Swiss-Prot
Match: RECQ_ECOLI (ATP-dependent DNA helicase recQ OS=Escherichia coli (strain K12) GN=recQ PE=1 SV=5) HSP 1 Score: 187.578 bits (475), Expect = 7.558e-47 Identity = 99/212 (46.70%), Postives = 137/212 (64.62%), Query Frame = 1 Query: 121 KLLRWHFGHAQFRDKQLDAIQAVLSGRDCFCLMPTGGGKSMCYQIPALAKPGIVLVVSPLIALMENQVIGLKEKGIAGEFLSSTQTMQVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYK 756 ++L+ FG+ QFR Q + I VLSGRDC +MPTGGGKS+CYQIPAL G+ +VVSPLI+LM++QV L+ G+A L+STQT + + ++ +G+ +RLLY+ PE F+ L + L+A+DEAHCIS WGHDFRP Y L LR P +P +ALTATA ++D++ L L +PL+ SSF+RPN+ Y + K Sbjct: 15 QVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTVVVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQ--IRLLYIAPERLMLDNFLEHLAHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEK 220 The following BLAST results are available for this feature:
BLAST of CK936361 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 28
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Sequences
The
following sequences are available for this feature:
EST sequence >CK936361 ID=CK936361; Name=CK936361; organism=Citrus sinensis; type=EST; length=842bpback to top |