EL492581

Overview
NameEL492581
Unique NameEL492581
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length260
Libraries
Library NameType
Citrus sinensis flesh cDNA-AFLP Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1497 contig Csv1_Contig1497:422..679. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EL492581 vs. ExPASy Swiss-Prot
Match: MTF1_PEA (MADS-box transcription factor 1 OS=Pisum sativum GN=MTF1 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 5.617e-22
Identity = 53/73 (72.60%), Postives = 62/73 (84.93%), Query Frame = 3
Query:   33 TAKQLESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLNPSAEDCGYG 251
            ++K LE+LERQLD SLKQIRSTRTQ+MLD L +LQ KE LL EAN+ L+QR MEGYQ+N+LQLN SAED GYG
Sbjct:  124 SSKDLETLERQLDSSLKQIRSTRTQFMLDQLGDLQRKEHLLCEANRALRQR-MEGYQINSLQLNLSAEDMGYG 195          
BLAST of EL492581 vs. ExPASy Swiss-Prot
Match: AGL9_PETHY (Agamous-like MADS-box protein AGL9 homolog OS=Petunia hybrida GN=FBP2 PE=1 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 6.867e-20
Identity = 51/72 (70.83%), Postives = 59/72 (81.94%), Query Frame = 3
Query:   36 AKQLESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLNPSAEDCGYG 251
            +K+LESLERQLDMSLKQIRSTRTQ MLD L +LQ KE  L+EAN+TLKQRLMEG  +N LQ   +A+D GYG
Sbjct:  123 SKELESLERQLDMSLKQIRSTRTQLMLDQLQDLQRKEHALNEANRTLKQRLMEGSTLN-LQWQQNAQDVGYG 193          
BLAST of EL492581 vs. ExPASy Swiss-Prot
Match: AGL9_SOLLC (Agamous-like MADS-box protein AGL9 homolog OS=Solanum lycopersicum GN=TDR5 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 8.394e-18
Identity = 45/58 (77.59%), Postives = 51/58 (87.93%), Query Frame = 3
Query:   36 AKQLESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVN 209
            +K+LESLERQLDMSLKQIRSTRTQ MLD LT+ Q KE  L+EAN+TLKQRLMEG Q+N
Sbjct:  123 SKELESLERQLDMSLKQIRSTRTQLMLDQLTDYQRKEHALNEANRTLKQRLMEGSQLN 180          
BLAST of EL492581 vs. ExPASy Swiss-Prot
Match: SEP3_ARATH (Developmental protein SEPALLATA 3 OS=Arabidopsis thaliana GN=SEP3 PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 3.190e-17
Identity = 44/69 (63.77%), Postives = 57/69 (82.61%), Query Frame = 3
Query:   33 TAKQLESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLNPSAED 239
            + K+LESLERQLD SLKQIR+ RTQ+MLD L +LQ KE++L+E NKTL+ RL +GYQ+  LQLNP+ E+
Sbjct:  124 STKELESLERQLDSSLKQIRALRTQFMLDQLNDLQSKERMLTETNKTLRLRLADGYQM-PLQLNPNQEE 191          
BLAST of EL492581 vs. ExPASy Swiss-Prot
Match: AGL9_SINAL (Agamous-like MADS-box protein AGL9 homolog OS=Sinapis alba GN=AGL9 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 5.441e-17
Identity = 44/69 (63.77%), Postives = 56/69 (81.16%), Query Frame = 3
Query:   33 TAKQLESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLNPSAED 239
            + K+LE LERQLD SLKQIR+ RTQ+MLD L +LQ KE++L+E NKTL+ RL +GYQ+  LQLNP+ ED
Sbjct:  124 STKELELLERQLDSSLKQIRALRTQFMLDQLNDLQSKERMLNETNKTLRLRLADGYQM-PLQLNPNQED 191          
BLAST of EL492581 vs. ExPASy Swiss-Prot
Match: AGL9_ARADE (Agamous-like MADS-box protein AGL9 homolog OS=Aranda deborah PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.026e-15
Identity = 45/74 (60.81%), Postives = 55/74 (74.32%), Query Frame = 3
Query:   36 AKQLESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQL-NPS-AEDCGYG 251
            +K+LE LERQLD SL+QIRSTRTQ+MLD L +LQ +EQ+L EANKTLK+R  E  Q N  Q+ +PS     GYG
Sbjct:  121 SKELEQLERQLDSSLRQIRSTRTQFMLDQLADLQRREQMLCEANKTLKRRFEESSQANQQQVWDPSNTHAVGYG 194          
BLAST of EL492581 vs. ExPASy Swiss-Prot
Match: MADS8_ORYSJ (MADS-box transcription factor 8 OS=Oryza sativa subsp. japonica GN=MADS8 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 4.766e-13
Identity = 38/70 (54.29%), Postives = 50/70 (71.43%), Query Frame = 3
Query:   39 KQLESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLNPSAEDCGY 248
            K+LE LE+QLD SL+ IRSTRTQ+MLD LT+LQ +EQ+L EANK L+++L E  Q++       A   GY
Sbjct:  125 KELEQLEKQLDSSLRHIRSTRTQHMLDQLTDLQRREQMLCEANKCLRRKLEESNQLHGQVWEHGATLLGY 194          
BLAST of EL492581 vs. ExPASy Swiss-Prot
Match: MADS7_ORYSJ (MADS-box transcription factor 7 OS=Oryza sativa subsp. japonica GN=MADS7 PE=1 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 1.387e-12
Identity = 34/61 (55.74%), Postives = 49/61 (80.33%), Query Frame = 3
Query:   39 KQLESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQL 221
            K+LESLE+QLD SLK +R+TRT++++D LTELQ KEQ++SEAN+ L+++L E   V   Q+
Sbjct:  125 KELESLEKQLDSSLKHVRTTRTKHLVDQLTELQRKEQMVSEANRCLRRKLEESNHVRGQQV 185          
BLAST of EL492581 vs. ExPASy Swiss-Prot
Match: MADS7_ORYSI (MADS-box transcription factor 7 OS=Oryza sativa subsp. indica GN=MADS7 PE=2 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 1.387e-12
Identity = 34/61 (55.74%), Postives = 49/61 (80.33%), Query Frame = 3
Query:   39 KQLESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQL 221
            K+LESLE+QLD SLK +R+TRT++++D LTELQ KEQ++SEAN+ L+++L E   V   Q+
Sbjct:  125 KELESLEKQLDSSLKHVRTTRTKHLVDQLTELQRKEQMVSEANRCLRRKLEESNHVRGQQV 185          
BLAST of EL492581 vs. ExPASy Swiss-Prot
Match: SEP1_ARATH (Developmental protein SEPALLATA 1 OS=Arabidopsis thaliana GN=SEP1 PE=1 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 2.615e-11
Identity = 32/51 (62.75%), Postives = 42/51 (82.35%), Query Frame = 3
Query:   36 AKQLESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRL 188
            +K+LE LERQLD SLKQ+RS +TQYMLD L++LQ+KEQ+L E N+ L  +L
Sbjct:  122 SKELEQLERQLDGSLKQVRSIKTQYMLDQLSDLQNKEQMLLETNRALAMKL 172          
The following BLAST results are available for this feature:
BLAST of EL492581 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
MTF1_PEA5.617e-2272.60MADS-box transcription factor 1 OS=Pisum sativum G... [more]
AGL9_PETHY6.867e-2070.83Agamous-like MADS-box protein AGL9 homolog OS=Petu... [more]
AGL9_SOLLC8.394e-1877.59Agamous-like MADS-box protein AGL9 homolog OS=Sola... [more]
SEP3_ARATH3.190e-1763.77Developmental protein SEPALLATA 3 OS=Arabidopsis t... [more]
AGL9_SINAL5.441e-1763.77Agamous-like MADS-box protein AGL9 homolog OS=Sina... [more]
AGL9_ARADE1.026e-1560.81Agamous-like MADS-box protein AGL9 homolog OS=Aran... [more]
MADS8_ORYSJ4.766e-1354.29MADS-box transcription factor 8 OS=Oryza sativa su... [more]
MADS7_ORYSJ1.387e-1255.74MADS-box transcription factor 7 OS=Oryza sativa su... [more]
MADS7_ORYSI1.387e-1255.74MADS-box transcription factor 7 OS=Oryza sativa su... [more]
SEP1_ARATH2.615e-1162.75Developmental protein SEPALLATA 1 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionC3700 Citrus sinensis flesh cDNA-AFLP Library Citrus sinensis cDNA clone ClC3700, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EL492581 ID=EL492581; Name=EL492581; organism=Citrus sinensis; type=EST; length=260bp
AGGGTCTCCTTGGANAGTACTTGGCCCTCTAAACAGCAAAGCAGCTTGAG
TCACTTGAAAGGCAGCTTGATATGTCATTGAAGCAGATCAGATCAACAAG
AACTCAGTACATGCTGGATACCCTTACTGAACTGCAACATAAGGAACAGT
TGCTGAGCGAAGCAAATAAGACCCTCAAACAAAGGTTGATGGAGGGATAC
CAAGTGAACACACTTCAATTGAATCCTAGTGCAGAAGATTGTGGTTATGG
GCTTACTAGA
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