CX675088
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX675088 vs. ExPASy Swiss-Prot
Match: NTH1_CAEEL (Probable endonuclease III homolog OS=Caenorhabditis elegans GN=nth-1 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 6.004e-18 Identity = 43/85 (50.59%), Postives = 54/85 (63.53%), Query Frame = -2 Query: 246 WNNVQGICVDTHMHCICNRLGRVSQPGRKQKTSSLEQTREVLQLWLPKEEWVPINPLSVGFGQTICTPIRPRCGMCSVSELCPSA 500 W GI VDTH+H I NRLG + KTS+ E+T++ L++ LPK EW PIN L VGFGQ C P+RP+CG C CPS+ Sbjct: 129 WGECVGIAVDTHVHRISNRLGWI-------KTSTPEKTQKALEILLPKSEWQPINHLLVGFGQMQCQPVRPKCGTCLCRFTCPSS 206
BLAST of CX675088 vs. ExPASy Swiss-Prot
Match: NTHL1_BOVIN (Endonuclease III-like protein 1 OS=Bos taurus GN=NTHL1 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 7.842e-18 Identity = 45/85 (52.94%), Postives = 51/85 (60.00%), Query Frame = -2 Query: 246 WNNVQGICVDTHMHCICNRLGRVSQPGRKQKTSSLEQTREVLQLWLPKEEWVPINPLSVGFGQTICTPIRPRCGMCSVSELCPSA 500 W V GI VDTH+H I NRL K+ T S E+TR L+ WLP+E W IN L VGFGQ C PIRPRC C LCP+A Sbjct: 223 WGTVSGIAVDTHVHRIANRLRWT-----KKATKSPEETRRALEEWLPRELWSEINGLLVGFGQQTCLPIRPRCQACLNRALCPAA 302
BLAST of CX675088 vs. ExPASy Swiss-Prot
Match: NTHL1_HUMAN (Endonuclease III-like protein 1 OS=Homo sapiens GN=NTHL1 PE=1 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 5.083e-17 Identity = 43/85 (50.59%), Postives = 50/85 (58.82%), Query Frame = -2 Query: 246 WNNVQGICVDTHMHCICNRLGRVSQPGRKQKTSSLEQTREVLQLWLPKEEWVPINPLSVGFGQTICTPIRPRCGMCSVSELCPSA 500 W V GI VDTH+H I NRL K+ T S E+TR L+ WLP+E W IN L VGFGQ C P+ PRC C LCP+A Sbjct: 230 WGTVSGIAVDTHVHRIANRLRWT-----KKATKSPEETRAALEEWLPRELWHEINGLLVGFGQQTCLPVHPRCHACLNQALCPAA 309
BLAST of CX675088 vs. ExPASy Swiss-Prot
Match: NTH1_SCHPO (Endonuclease III homolog OS=Schizosaccharomyces pombe GN=nth1 PE=1 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 8.670e-17 Identity = 46/88 (52.27%), Postives = 52/88 (59.09%), Query Frame = -2 Query: 243 WNNVQGICVDTHMHCICNRLGRVSQPGRKQKTSSLEQTREVLQLWLPKEEWVPINPLSVGFGQTICTPIRPRCGMCSVSE--LCPSAF 500 WN GI VD H+H ICN L + T + EQTR LQ WLPKE W +N VGFGQTIC P RC MC++S LCPSAF Sbjct: 152 WNKTVGIGVDVHVHRICNLLHWCN-------TKTEEQTRAALQSWLPKELWFELNHTLVGFGQTICLPRGRRCDMCTLSSKGLCPSAF 232
BLAST of CX675088 vs. ExPASy Swiss-Prot
Match: NTHL1_MOUSE (Endonuclease III-like protein 1 OS=Mus musculus GN=Nthl1 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 3.295e-16 Identity = 40/85 (47.06%), Postives = 51/85 (60.00%), Query Frame = -2 Query: 246 WNNVQGICVDTHMHCICNRLGRVSQPGRKQKTSSLEQTREVLQLWLPKEEWVPINPLSVGFGQTICTPIRPRCGMCSVSELCPSA 500 W + GI VDTH+H I NRL K+ T + E+TR+ L+ WLP+ W +N L VGFGQ IC P+ PRC C LCP+A Sbjct: 218 WGTISGIAVDTHVHRIANRLRWT-----KKMTKTPEETRKNLEEWLPRVLWSEVNGLLVGFGQQICLPVHPRCQACLNKALCPAA 297
BLAST of CX675088 vs. ExPASy Swiss-Prot
Match: NTH1_ENCCU (Endonuclease III homolog OS=Encephalitozoon cuniculi GN=NTH1 PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 2.361e-14 Identity = 39/84 (46.43%), Postives = 50/84 (59.52%), Query Frame = -2 Query: 246 NNVQGICVDTHMHCICNRLGRVSQPGRKQKTSSLEQTREVLQLWLPKEEWVPINPLSVGFGQTICTPIRPRCGMCSVSELCPSA 497 N GI VDTH+H I NR+G V +T +E TR L+ +P++EW IN + VGFGQTIC RPRC C + CPS+ Sbjct: 160 NRTVGISVDTHVHRISNRIGLV-------RTRDVESTRRELERVVPRKEWKTINNILVGFGQTICVAKRPRCEECCIRGRCPSS 236
BLAST of CX675088 vs. ExPASy Swiss-Prot
Match: NTG2_YEAST (DNA base excision repair N-glycosylase 2 OS=Saccharomyces cerevisiae GN=NTG2 PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 3.770e-12 Identity = 33/82 (40.24%), Postives = 44/82 (53.66%), Query Frame = -2 Query: 255 WNNVQGICVDTHMHCICNRLGRVSQPGRKQKTSSLEQTREVLQLWLPKEEWVPINPLSVGFGQTICTPIRPRCGMCSVSELC 500 W + GICVD H+H +C V K + E TR+ LQ+WLP W IN + VGFGQ IC RC +C +++C Sbjct: 258 WGLIAGICVDVHVHRLCKMWNWVDPI----KCKTAEHTRKELQVWLPHSLWYEINTVLVGFGQLICMARGKRCDLCLANDVC 335 The following BLAST results are available for this feature:
BLAST of CX675088 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX675088 ID=CX675088; Name=CX675088; organism=Citrus sinensis; type=EST; length=501bpback to top |