EY665782

Overview
NameEY665782
Unique NameEY665782
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length858
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY665782 vs. ExPASy Swiss-Prot
Match: CB2G_SOLLC (Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum GN=CAB3C PE=3 SV=1)

HSP 1 Score: 338.961 bits (868), Expect = 2.928e-95
Identity = 164/185 (88.65%), Postives = 174/185 (94.05%), Query Frame = 3 
Query:   96 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGE 641
            MATSTMALSSS F GKAV L+PS +E++  GR++MRKT +K+   SSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYRIAGGPLGE
Sbjct:    1 MATSTMALSSSTFAGKAVKLSPSSSEITGNGRVTMRKTATKAKPASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGE 185

HSP 2 Score: 31.9574 bits (71), Expect = 2.928e-95
Identity = 12/17 (70.59%), Postives = 13/17 (76.47%), Query Frame = 1 
Query:  649 PIVPSGIFDPLGLGDDP 699
            P+ P G FDPLGL DDP
Sbjct:  189 PLYPGGSFDPLGLADDP 205
[Close]
BLAST of EY665782 vs. ExPASy Swiss-Prot
Match: CB24_TOBAC (Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum GN=CAB40 PE=2 SV=1)

HSP 1 Score: 338.191 bits (866), Expect = 1.443e-94
Identity = 163/185 (88.11%), Postives = 174/185 (94.05%), Query Frame = 3 
Query:   96 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGE 641
            MA STMALSS SF GKAV L+PS +E++  G+++MRKT SK+  VSSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYR+AGGPLGE
Sbjct:    1 MAASTMALSSPSFAGKAVKLSPSSSEITGNGKVTMRKTASKAKTVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGE 185

HSP 2 Score: 30.4166 bits (67), Expect = 1.443e-94
Identity = 11/17 (64.71%), Postives = 13/17 (76.47%), Query Frame = 1 
Query:  649 PIVPSGIFDPLGLGDDP 699
            P+ P G FDPLGL +DP
Sbjct:  189 PLYPGGSFDPLGLAEDP 205
[Close]
BLAST of EY665782 vs. ExPASy Swiss-Prot
Match: CB21_TOBAC (Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana tabacum GN=CAB16 PE=2 SV=1)

HSP 1 Score: 338.191 bits (866), Expect = 1.443e-94
Identity = 161/184 (87.50%), Postives = 172/184 (93.48%), Query Frame = 3 
Query:   96 MATSTMALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGE 641
            MA ST ALSS F GKAV L+PS +E++  G+++MRKT SK+  VSSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYR+AGGPLGE
Sbjct:    1 MAASTTALSSPFAGKAVKLSPSSSEVTGNGKVTMRKTASKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGE 184

HSP 2 Score: 30.4166 bits (67), Expect = 1.443e-94
Identity = 11/17 (64.71%), Postives = 13/17 (76.47%), Query Frame = 1 
Query:  649 PIVPSGIFDPLGLGDDP 699
            P+ P G FDPLGL +DP
Sbjct:  188 PLYPGGSFDPLGLAEDP 204
[Close]
BLAST of EY665782 vs. ExPASy Swiss-Prot
Match: CB2B_SOLLC (Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum lycopersicum GN=CAB1B PE=3 SV=1)

HSP 1 Score: 334.724 bits (857), Expect = 1.580e-93
Identity = 161/183 (87.98%), Postives = 170/183 (92.90%), Query Frame = 3 
Query:   96 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGE 641
            MA +TMALSS SF G+AV L+PS +E+S  GRI+MRK  +KS  S SPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYRIAGGPLGE
Sbjct:    1 MAAATMALSSPSFAGQAVKLSPSASEISGNGRITMRKAVAKSAPSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGE 183

HSP 2 Score: 30.4166 bits (67), Expect = 1.580e-93
Identity = 11/17 (64.71%), Postives = 13/17 (76.47%), Query Frame = 1 
Query:  649 PIVPSGIFDPLGLGDDP 699
            P+ P G FDPLGL +DP
Sbjct:  187 PLYPGGSFDPLGLAEDP 203
[Close]
BLAST of EY665782 vs. ExPASy Swiss-Prot
Match: CB22_TOBAC (Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana tabacum GN=CAB21 PE=2 SV=1)

HSP 1 Score: 334.724 bits (857), Expect = 1.580e-93
Identity = 159/183 (86.89%), Postives = 171/183 (93.44%), Query Frame = 3 
Query:   96 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGE 641
            MA +TMALSS SF G+AV L+PS  E++  GR+SMRKT +K V+S SPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYR+AGGPLGE
Sbjct:    1 MAAATMALSSPSFAGQAVKLSPSAPEITGNGRVSMRKTVAKPVASSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGE 183

HSP 2 Score: 30.4166 bits (67), Expect = 1.580e-93
Identity = 11/17 (64.71%), Postives = 13/17 (76.47%), Query Frame = 1 
Query:  649 PIVPSGIFDPLGLGDDP 699
            P+ P G FDPLGL +DP
Sbjct:  187 PLYPGGSFDPLGLAEDP 203
[Close]
BLAST of EY665782 vs. ExPASy Swiss-Prot
Match: CB25_NICPL (Chlorophyll a-b binding protein E, chloroplastic OS=Nicotiana plumbaginifolia GN=CABE PE=3 SV=1)

HSP 1 Score: 333.954 bits (855), Expect = 2.688e-93
Identity = 159/184 (86.41%), Postives = 171/184 (92.93%), Query Frame = 3 
Query:   96 MATSTMALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGE 641
            MA ST ALSS F GKAV L+PS +E++  G+++MRKT +K+  VSSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYR+AG PLGE
Sbjct:    1 MAASTTALSSPFAGKAVKLSPSSSEVTGNGKVTMRKTANKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGEPLGE 184

HSP 2 Score: 30.4166 bits (67), Expect = 2.688e-93
Identity = 11/17 (64.71%), Postives = 13/17 (76.47%), Query Frame = 1 
Query:  649 PIVPSGIFDPLGLGDDP 699
            P+ P G FDPLGL +DP
Sbjct:  188 PLYPGGSFDPLGLAEDP 204
[Close]
BLAST of EY665782 vs. ExPASy Swiss-Prot
Match: CB25_TOBAC (Chlorophyll a-b binding protein 50, chloroplastic OS=Nicotiana tabacum GN=CAB50 PE=2 SV=1)

HSP 1 Score: 333.569 bits (854), Expect = 3.507e-93
Identity = 160/185 (86.49%), Postives = 174/185 (94.05%), Query Frame = 3 
Query:   96 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGE 641
            MA +TMALSSS F GKAV L+PS +E++  G+++MRKT +K+  +SSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYR+AGGPLGE
Sbjct:    1 MAAATMALSSSSFAGKAVKLSPSSSEITGNGKVTMRKTVTKAKPLSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGE 185

HSP 2 Score: 30.4166 bits (67), Expect = 3.507e-93
Identity = 11/17 (64.71%), Postives = 13/17 (76.47%), Query Frame = 1 
Query:  649 PIVPSGIFDPLGLGDDP 699
            P+ P G FDPLGL +DP
Sbjct:  189 PLYPGGSFDPLGLAEDP 205
[Close]
BLAST of EY665782 vs. ExPASy Swiss-Prot
Match: CB27_TOBAC (Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana tabacum GN=CAB7 PE=3 SV=1)

HSP 1 Score: 329.331 bits (843), Expect = 2.255e-92
Identity = 159/185 (85.95%), Postives = 170/185 (91.89%), Query Frame = 3 
Query:   96 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGE 641
            M  STMALSS SF G AV L+PS +E++  G+  MRKT +K+  VSSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGA+EGYR+AGGPLGE
Sbjct:    1 MTASTMALSSPSFAGNAVKLSPSSSEITGNGKAIMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAIEGYRVAGGPLGE 185

HSP 2 Score: 31.9574 bits (71), Expect = 2.255e-92
Identity = 12/17 (70.59%), Postives = 13/17 (76.47%), Query Frame = 1 
Query:  649 PIVPSGIFDPLGLGDDP 699
            P+ P G FDPLGL DDP
Sbjct:  189 PLYPGGSFDPLGLADDP 205
[Close]
BLAST of EY665782 vs. ExPASy Swiss-Prot
Match: CB2A_SPIOL (Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea PE=1 SV=1)

HSP 1 Score: 328.946 bits (842), Expect = 2.942e-92
Identity = 160/185 (86.49%), Postives = 169/185 (91.35%), Query Frame = 3 
Query:   96 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSK--SVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGE 641
            MA+STMALSS S  GKAV L P+ +E+   GRI+MRKT  K  +V S SPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYRIAGGPLGE
Sbjct:    1 MASSTMALSSPSLAGKAVKLGPTASEIIGEGRITMRKTAGKPKTVQSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGE 185

HSP 2 Score: 31.9574 bits (71), Expect = 2.942e-92
Identity = 12/17 (70.59%), Postives = 13/17 (76.47%), Query Frame = 1 
Query:  649 PIVPSGIFDPLGLGDDP 699
            P+ P G FDPLGL DDP
Sbjct:  189 PLYPGGSFDPLGLADDP 205
[Close]
BLAST of EY665782 vs. ExPASy Swiss-Prot
Match: CB25_PETSP (Chlorophyll a-b binding protein 91R, chloroplastic OS=Petunia sp. GN=CAB91R PE=3 SV=1)

HSP 1 Score: 328.561 bits (841), Expect = 3.838e-92
Identity = 159/185 (85.95%), Postives = 171/185 (92.43%), Query Frame = 3 
Query:   96 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGE 641
            MA +TMALSS SF GKAV  +PS +E++  G+ +MRKT +K+  VSSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTA LSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYR+AGGPLGE
Sbjct:    1 MAAATMALSSPSFAGKAVKFSPSSSEITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAELSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGE 185

HSP 2 Score: 31.9574 bits (71), Expect = 3.838e-92
Identity = 12/17 (70.59%), Postives = 13/17 (76.47%), Query Frame = 1 
Query:  649 PIVPSGIFDPLGLGDDP 699
            P+ P G FDPLGL DDP
Sbjct:  189 PLYPGGSFDPLGLADDP 205
The following BLAST results are available for this feature:
BLAST of EY665782 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
CB2G_SOLLC2.928e-9588.65Chlorophyll a-b binding protein 3C, chloroplastic ... [more]
CB24_TOBAC1.443e-9488.11Chlorophyll a-b binding protein 40, chloroplastic ... [more]
CB21_TOBAC1.443e-9487.50Chlorophyll a-b binding protein 16, chloroplastic ... [more]
CB2B_SOLLC1.580e-9387.98Chlorophyll a-b binding protein 1B, chloroplastic ... [more]
CB22_TOBAC1.580e-9386.89Chlorophyll a-b binding protein 21, chloroplastic ... [more]
CB25_NICPL2.688e-9386.41Chlorophyll a-b binding protein E, chloroplastic O... [more]
CB25_TOBAC3.507e-9386.49Chlorophyll a-b binding protein 50, chloroplastic ... [more]
CB27_TOBAC2.255e-9285.95Chlorophyll a-b binding protein 7, chloroplastic O... [more]
CB2A_SPIOL2.942e-9286.49Chlorophyll a-b binding protein, chloroplastic OS=... [more]
CB25_PETSP3.838e-9285.95Chlorophyll a-b binding protein 91R, chloroplastic... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-095-E06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665782 ID=EY665782; Name=EY665782; organism=Citrus sinensis; type=EST; length=858bp
AGAATCCGGGGAACCGCGGTCACGGTCGGGATTCCCGGGTCGACCACGCG
TCCGCTCGAACACTAGAGCTCACCCTTTACTCTGATCATTGTAAAATGGC
AACCTCGACCATGGCTCTCTCCTCATCATTCGTCGGCAAGGCTGTGAACC
TTGCCCCTTCAGGCAATGAGCTGAGCAATGGTGGCCGCATCTCCATGCGT
AAAACCGGGAGCAAGTCTGTTTCTTCAGGTAGCCCGTGGTACGGCCCGGA
CAGAGTCAAGTACTTGGGTCCATTCTCTGGCGAGCCCCCAAGCTACTTGA
CTGGTGAGTTCCCTGGTGACTACGGTTGGGACACTGCTGGGCTTTCAGCT
GACCCAGAAACCTTTGCCAAGAACCGTGAACTCGAAGTCATCCACTGCAG
ATGGGCCATGTTGGGAGCTCTTGGATGCGTCTTCCCGGAGCTCTTGGCCC
GCAACGGAGTCAAGTTCGGTGAGGCCGTGTGGTTCAAGGCGGGGGCCCAG
ATCTTCAGCGAGGGCGGGCTTGACTACTTGGGGAACCCAAGCCTGATCCA
CGCTCAGAGCATCTTGGCCATCTGGGCTTGCCAGGTGGTCTTGATGGGAG
CCGTTGAGGGTTACAGAATTGCTGGAGGGCCGCTCGGTGAAGGGCTGACC
CATTGTACCCAGTGGCATCTTTGATCCATTGGGTTTGGGTGATGACCCCC
GAACGCTTTTGCCGAACCCAACGGTTAAGGAACTCAACAAGGAAAGGCGG
CCCAAGCCCCCCCCGTTAGGCCTTCTTCGTACCAGGGCCCATTTCGACCG
GAAGGGGGAACTACCATGAAAATTAGAAACAAAACTGCTGGATAGATACT
GGAACATA
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