CX675049

Overview
NameCX675049
Unique NameCX675049
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length867
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CX675049_ssr761 microsatellite CX675049_ssr761:761..772. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of CX675049 vs. ExPASy Swiss-Prot
Match: C71A1_PERAE (Cytochrome P450 71A1 OS=Persea americana GN=CYP71A1 PE=1 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 4.369e-29
Identity = 90/285 (31.58%), Postives = 129/285 (45.26%), Query Frame = -3
Query:    2 GGPLNLXEMLLFVSNNIVSRCVIGRKADEEEENIGKSNKYGXXXXXXXEQLAAFCIGXXXXXXXXXXXXSGLIGRLNATARALDALLDQVIEEHINKVLSEXXXXXXXXXXXXXXDILLHLWKNSMLGAELSQDNLEAIILVCLFPLTR*SQLLARPRFFTSFAHITRAKAHTCVYTYTYASD*IFLHVSHS*DMFXXXXXXXXXXXEWAMAELVKNPTSMKTVQEEIRSVAKGKLNIDMKDIEKMDSLKCVLKETLRLHPPAPLLVPREIAQCVKRRGYDIPAK 856
            G  +NL E+LL +S+  ++R   G+K + EEE   + NK+          + AF +G            +G+  RL      LDA +D VI++H+   LS               D+LLHL K+S LG  L+++NL+A+IL                                                    DMF           EWAMAEL+K+P  M+  Q+E+R V   K  ++ +D+ ++  LK ++KETLRLHP APLLVPRE  + V  RGY IPAK
Sbjct:  165 GEAVNLSELLLLLSSGTITRVAFGKKYEGEEE---RKNKFADLATELTTLMGAFFVGDYFPSFAWVDVLTGMDARLKRNHGELDAFVDHVIDDHL---LSRKANGSDGVEQKDLVDVLLHLQKDSSLGVHLNRNNLKAVIL----------------------------------------------------DMFSGGTDTTAVTLEWAMAELIKHPDVMEKAQQEVRRVVGKKAKVEEEDLHQLHYLKLIIKETLRLHPVAPLLVPRESTRDVVIRGYHIPAK 391          
BLAST of CX675049 vs. ExPASy Swiss-Prot
Match: C71A8_MENPI (Cytochrome P450 71A8 OS=Mentha piperita GN=CYP71A8 PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.173e-22
Identity = 81/285 (28.42%), Postives = 118/285 (41.40%), Query Frame = -3
Query:    8 NKGGPLNLXEMLLFVSNNIVSRCVIGRKADEEEENIGKSNKYGXXXXXXXEQLAAFCIGXXXXXXXXXXXXSGLIGRLNATARALDALLDQVIEEHINKVLSEXXXXXXXXXXXXXXDILLHLWKNSMLGAELSQDNLEAIILVCLFPLTR*SQLLARPRFFTSFAHITRAKAHTCVYTYTYASD*IFLHVSHS*DMFXXXXXXXXXXXEWAMAELVKNPTSMKTVQEEIRSVAKGKLNIDMKDIEKMDSLKCVLKETLRLHPPAPLLVPREIAQCVKRRGYDIP 862
            +  G +NL  M   ++N++V R  IGRK    +EN     K+        E L A  IG            +G   R++  A+ +D  L++VI E +    ++               ILL +++N+  G  + +D+++AIIL                                                    D+F           EWAM EL+++P  MK +Q E+R V K K NI   DIEKM  LK V+KET+R H P PLLVPR     V+  GYD+P
Sbjct:  172 DSSGNVNLSHMFTQLTNDVVCRSAIGRKYGAGDEN---GEKFLEILREFLELLGAISIGDFVPSLWWINRINGFDRRVDRIAKEMDEFLEKVIHERLENPAAKAEENFVD--------ILLEIYRNNSAGVSIDRDSIKAIIL----------------------------------------------------DVFAAGTDTTAVVLEWAMTELLRHPEIMKKLQSEVRQVVKDKHNITDDDIEKMHYLKAVMKETMRFHTPIPLLVPRVARNDVEVMGYDVP 393          
BLAST of CX675049 vs. ExPASy Swiss-Prot
Match: C71A9_SOYBN (Cytochrome P450 71A9 OS=Glycine max GN=CYP71A9 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.153e-21
Identity = 78/284 (27.46%), Postives = 115/284 (40.49%), Query Frame = -3
Query:    2 GPLNLXEMLLFVSNNIVSRCVIGRKADEEEENIGKSNKYGXXXXXXXEQLAAFCIGXXXXXXXXXXXXSGLIGRLNATARALDALLDQVIEEHINKVLSEXXXXXXXXXXXXXXDILLHLWKNSMLGAELSQDNLEAIILVCLFPLTR*SQLLARPRFFTSFAHITRAKAHTCVYTYTYASD*IFLHVSHS*DMFXXXXXXXXXXXEWAMAELVKNPTSMKTVQEEIRSVAKGKLNIDMKDIEKMDSLKCVLKETLRLHPPAPLLVPREIAQCVKRRGYDIPAK 853
            GP+NL E+ L ++NNIV R  +G++          +NK           L  F               SGL  RL    R +D   DQVI+EHI    SE               +LL + K+      ++ D ++ +++                                                    D+F            W M+EL++NP +MK  QEE+R +  GK  ++  D+ K+  +K V+KE LRLHPPAPLLVPREI +    +G++IPAK
Sbjct:  164 GPVNLSELTLSLTNNIVCRIALGKR---NRSGADDANKVSEMLKETQAMLGGFFPVDFFPRLGWLNKFSGLENRLEKIFREMDNFYDQVIKEHIADNSSERSGAEHEDVVD----VLLRVQKDPNQAIAITDDQIKGVLV----------------------------------------------------DIFVAGTDTASATIIWIMSELIRNPKAMKRAQEEVRDLVTGKEMVEEIDLSKLLYIKSVVKEVLRLHPPAPLLVPREITENCTIKGFEIPAK 388          
BLAST of CX675049 vs. ExPASy Swiss-Prot
Match: C71A4_SOLME (Cytochrome P450 71A4 OS=Solanum melongena GN=CYP71A4 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.153e-21
Identity = 82/283 (28.98%), Postives = 119/283 (42.05%), Query Frame = -3
Query:    2 LNLXEMLLFVSNNIVSRCVIGRKADEEEENIGKSNKYGXXXXXXXEQLAAFCIGXXXXXXXXXXXXSGLIGRLNATARALDALLDQVIEEHINKVLSEXXXXXXXXXXXXXXDILLHLWKNSMLGAELSQDNLEAIILVCLFPLTR*SQLLARPRFFTSFAHITRAKAHTCVYTYTYASD*IFLHVSHS*DMFXXXXXXXXXXXEWAMAELVKNPTSMKTVQEEIRSVAKGKLNIDMKDIEKMDSLKCVLKETLRLHPPAPLLVPREIAQCVKRRG-YDIPAK 847
            +NL E L F++NNI SR  +GR  DE E  I   +          + L  F +G            +GL  ++   A+ LD  LD VIEEHI  + ++              D+LL +         L +D+L+AI+L                                                    D F           +W MA++++ P +MKT+Q E+R +A+GK  I   D++ M  L+ V+KE+LRLHPP  LLVPRE  + VK  G Y IPA+
Sbjct:  172 INLGEHLCFLTNNITSRVALGRTYDERESGIDAKD----ILEQFLQLLDTFNVGDYIPWLKWVNKITGLDTKVEKIAKKLDTFLDSVIEEHI--IRNKKEEYAITDEAKDFVDVLLEIQNGKETDFPLQRDSLKAILL----------------------------------------------------DAFAAGTDTIYTNLDWTMADVLRQPRAMKTLQNEVRGLAQGKSEITEDDLKNMQYLRAVIKESLRLHPPNSLLVPRESMEDVKLLGYYHIPAR 396          
BLAST of CX675049 vs. ExPASy Swiss-Prot
Match: C71AE_ARATH (Cytochrome P450 71A14 OS=Arabidopsis thaliana GN=CYP71A14 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.099e-19
Identity = 76/283 (26.86%), Postives = 123/283 (43.46%), Query Frame = -3
Query:    5 PLNLXEMLLFVSNNIVSRCVIGRKADEEEENIGKSNKYGXXXXXXXEQLAAFCIGXXXXXXXXXXXXSGLIGRLNATARALDALLDQVIEEHINKVLSEXXXXXXXXXXXXXXDILLHLWKNSMLGAELSQDNLEAIILVCLFPLTR*SQLLARPRFFTSFAHITRAKAHTCVYTYTYASD*IFLHVSHS*DMFXXXXXXXXXXXEWAMAELVKNPTSMKTVQEEIRSVA-KGKLNIDMKDIEKMDSLKCVLKETLRLHPPAPLLVPREIAQCVKRRGYDIPA 850
            PLNL E+LL +++++ SR  +GRK  +EE      + +        E +  F +G             G+  +    ++A   L+++V++EH++                   D+LL L ++   G ++ + +++ +IL                                                    DMF           EW M EL+++P  MK +Q+EIR+ A K  L I  +D+E M  LK V+KE LRLHPP PLLVPRE+++ +K +GYDI A
Sbjct:  169 PLNLSELLLTLTSDVTSRVSLGRKYSKEES----MSDFKIQMRKITELVGGFPVGEYIPCLAWIDKLRGVDEKAEEVSKAFGDLMEKVLQEHLDAT---------DKPTLDFVDVLLSLERHERNGVQIRRSDIKFLIL----------------------------------------------------DMFLAGTETTYALLEWIMTELIRHPECMKKLQDEIRAKATKLILYISEEDVEDMKYLKAVVKEVLRLHPPLPLLVPRELSEDIKLKGYDIAA 386          
BLAST of CX675049 vs. ExPASy Swiss-Prot
Match: C71B3_ARATH (Cytochrome P450 71B3 OS=Arabidopsis thaliana GN=CYP71B3 PE=2 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 1.193e-18
Identity = 48/79 (60.76%), Postives = 58/79 (73.42%), Query Frame = -3
Query:    2 WAMAELVKNPTSMKTVQEEIRSVA--KGKLNIDMKDIEKMDSLKCVLKETLRLHPPAPLLVPREIAQCVKRRGYDIPAK 232
            WAMAELVKNP  MK  QEEIR+    K K  I+ +D++K+  LK V+KETLRLHPPAPLL+PRE    +K +GYDIP K
Sbjct:  315 WAMAELVKNPRVMKKAQEEIRTCIGIKQKERIEEEDVDKLQYLKLVIKETLRLHPPAPLLLPRETMADIKIQGYDIPRK 393          
BLAST of CX675049 vs. ExPASy Swiss-Prot
Match: C71A2_SOLME (Cytochrome P450 71A2 OS=Solanum melongena GN=CYP71A2 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.532e-18
Identity = 80/284 (28.17%), Postives = 117/284 (41.20%), Query Frame = -3
Query:    2 LNLXEMLLFVSNNIVSRCVIGRKADEEEENIGKSNKYGXXXXXXXEQLAAFCIGXXXXXXXXXXXXSGLIGRLNATARALDALLDQVIEEHINKVLSEXXXXXXXXXXXXXXDILLHLWKNSMLGAELSQDNLEAIILVCLFPLTR*SQLLARPRFFTSFAHITRAKAHTCVYTYTYASD*IFLHVSHS*DMFXXXXXXXXXXXEWAMAELVKNPTSMKTVQEEIRSVAKGKLNIDMKDIEKMDSLKCVLKETLRLHP-PAPLLVPREIAQCVKRRG-YDIPAK 847
            +NL E L  ++NNI+SR  +GR  DE+E  I              E L  F +G            +GL  ++   A+ LD  L+ VIEEHI +   E               +LL +   +     L +D+L+AI+L                                                    D F           +W MAEL++ P ++KT+Q+E+R +A+GK  I   D++ M  L+ V+KE+LRLHP    LLVPRE  + V   G Y IPA+
Sbjct:  173 INLGEHLCSLTNNIISRVALGRTYDEKESGIEH------IIEQFVELLGIFNVGDYIPRLEWVNKFTGLDAKVKKVAKELDMFLEIVIEEHIIRKKKEEYTSTGEAKDFVD--VLLEIQNGNETDFPLQRDSLKAILL----------------------------------------------------DSFAAGTDTTFATLDWTMAELLRQPRALKTLQDEVRGLAQGKSEITEDDLKNMQYLRAVIKESLRLHPTQESLLVPRESMEDVNLLGYYHIPAR 396          
BLAST of CX675049 vs. ExPASy Swiss-Prot
Match: C71AK_ARATH (Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=CYP71A20 PE=2 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 1.722e-17
Identity = 47/91 (51.65%), Postives = 61/91 (67.03%), Query Frame = -3
Query:    5 DMFXXXXXXXXXXXEWAMAELVKNPTSMKTVQEEIRSVAKGKLNIDMKDIEKMDSLKCVLKETLRLHPPAPLLVPREIAQCVKRRGYDIPA 277
            DMF           EWAM EL++NP  MK +QEEIRS +   L +  K+ EKM+ L+ V+KE LRL PPAPLLVPR +++ VK +GY+IPA
Sbjct:  296 DMFLAGTATTLSFLEWAMTELMRNPKVMKKLQEEIRSSSPQDLFVTEKEAEKMNYLQAVIKEALRLRPPAPLLVPRVLSEDVKLKGYNIPA 386          
BLAST of CX675049 vs. ExPASy Swiss-Prot
Match: C71AO_ARATH (Cytochrome P450 71A24 OS=Arabidopsis thaliana GN=CYP71A24 PE=2 SV=3)

HSP 1 Score: 89.7373 bits (221), Expect = 2.249e-17
Identity = 73/281 (25.98%), Postives = 111/281 (39.50%), Query Frame = -3
Query:    5 LNLXEMLLFVSNNIVSRCVIGRKADEEEENIGKSNKYGXXXXXXXEQLAAFCIGXXXXXXXXXXXXSGLIGRLNATARALDALLDQVIEEHINKVLSEXXXXXXXXXXXXXXDILLHLWKNSMLGAELSQDNLEAIILVCLFPLTR*SQLLARPRFFTSFAHITRAKAHTCVYTYTYASD*IFLHVSHS*DMFXXXXXXXXXXXEWAMAELVKNPTSMKTVQEEIRSVAKGKLNIDMKDIEKMDSLKCVLKETLRLHPPAPLLVPREIAQCVKRRGYDIPA 847
            +NL E+L+ ++NN++ R  +GRK        G    +          L  F +G             GL G+L   +  LD  L++V+++H++                   D LL + +   +G E+ + +++AIIL                                                    D+F           EWAM EL+ +   +  +QEE+R V K K  +   D++ M  LK V+KETLRLHPP PL+VP E    VK R Y IPA
Sbjct:  168 INLSEILVNLTNNVICRVALGRK-------YGGKTDFKDLMKRLTRLLGEFSVGSYVSWLAWIDWIRGLDGQLIKISNDLDEFLERVVQDHVD----------GDGHKNDFVDFLLTIEREKSVGFEIDRLSIKAIIL----------------------------------------------------DVFVGDMDTTYTLLEWAMTELLCHHECLDRLQEEVRMVCKDKSGVSEDDLQDMKYLKAVIKETLRLHPPLPLMVPHESTHDVKLRDYHIPA 379          
BLAST of CX675049 vs. ExPASy Swiss-Prot
Match: C71A6_NEPRA (Cytochrome P450 71A6 (Fragment) OS=Nepeta racemosa GN=CYP71A6 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.938e-17
Identity = 45/89 (50.56%), Postives = 58/89 (65.17%), Query Frame = -3
Query:   11 DMFXXXXXXXXXXXEWAMAELVKNPTSMKTVQEEIRSVAKGKLNIDMKDIEKMDSLKCVLKETLRLHPPAPLLVPREIAQCVKRRGYDI 277
            DMF           EWA++EL+KNP +MK +Q+E+R VA  K  I+  D+EKM  LK V+KE+LRLH P PLLVPRE  +  K  GYD+
Sbjct:  307 DMFLAGTDTTVTALEWALSELIKNPRAMKILQKEVRGVAGSKGEIEESDLEKMPYLKAVMKESLRLHAPVPLLVPRESTRDTKVLGYDV 395          
The following BLAST results are available for this feature:
BLAST of CX675049 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 80
Match NameE-valueIdentityDescription
C71A1_PERAE4.369e-2931.58Cytochrome P450 71A1 OS=Persea americana GN=CYP71A... [more]
C71A8_MENPI5.173e-2228.42Cytochrome P450 71A8 OS=Mentha piperita GN=CYP71A8... [more]
C71A9_SOYBN1.153e-2127.46Cytochrome P450 71A9 OS=Glycine max GN=CYP71A9 PE=... [more]
C71A4_SOLME1.153e-2128.98Cytochrome P450 71A4 OS=Solanum melongena GN=CYP71... [more]
C71AE_ARATH4.099e-1926.86Cytochrome P450 71A14 OS=Arabidopsis thaliana GN=C... [more]
C71B3_ARATH1.193e-1860.76Cytochrome P450 71B3 OS=Arabidopsis thaliana GN=CY... [more]
C71A2_SOLME4.532e-1828.17Cytochrome P450 71A2 OS=Solanum melongena GN=CYP71... [more]
C71AK_ARATH1.722e-1751.65Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=C... [more]
C71AO_ARATH2.249e-1725.98Cytochrome P450 71A24 OS=Arabidopsis thaliana GN=C... [more]
C71A6_NEPRA2.938e-1750.56Cytochrome P450 71A6 (Fragment) OS=Nepeta racemosa... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_59D10_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-59D10-G19-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675049 ID=CX675049; Name=CX675049; organism=Citrus sinensis; type=EST; length=867bp
TTTTTGCAGGAATGTCGTAACCTCTCCGTTTGACACACTGTGCTATTTCT
CGCGGAACCAAAAGAGGAGCTGGTGGATGTAACCTTAGAGTTTCTTTGAG
GACACATTTCAAACTGTCCATCTTCTCAATATCCTTCATGTCTATATTTA
ATTTCCCTTTTGCCACACTTCTAATCTCTTCCTGAACTGTTTTCATACTA
GTTGGATTTTTTACTAGCTCTGCCATTGCCCACTCTAGTGTTGTTTCTGT
AGTATCAGTTCCTCCTAGAAACATGTCCTAAGAATGCGAAACATGAAGAA
ATATTTAGTCTGATGCATATGTATATGTATATACGCAAGTGTGCGCTTTG
GCTCGCGTGATGTGTGCAAAAGATGTAAAAAATCTAGGGCGAGCTAATAA
TTGAGACTACCTAGTTAAAGGGAAGAGACAGACCAAGATAATTGCTTCAA
GATTGTCCTGAGAAAGCTCTGCCCCAAGCATGCTATTCTTCCAAAGATGG
AGGAGTATATCCACGAAGTCTTTTTTATCAGATTGGTCATCAACATCATC
ACTTTCTGATAATACCTTGTTAATATGCTCTTCAATCACCTGATCAAGCA
AAGCGTCTAATGCTCTAGCAGTTGCGTTTAGACGACCAATGAGTCCCGAT
AGATCATCTAACCATCATAAAGATGAAAACATATCCCCTATACAAAAGGC
TGCAAGCTGCTCTTCTAGCCTTCTTAATAACTCACCATACTTATTGCTTT
TTCCAATATTTTCTTCTTCTTCATCAGCTTTCCTCCCAATAACGCAGCGG
GAAACTATATTGTTGGAAACAAATAGTAGCATCTCCNTTAAATTAAGAGG
GCCTCCTTTATTGAAAC
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