CX675047

Overview
NameCX675047
Unique NameCX675047
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length762
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5467 contig Csv1_Contig5467:1..762. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX675047 vs. ExPASy Swiss-Prot
Match: CNNM2_RAT (Metal transporter CNNM2 OS=Rattus norvegicus GN=Cnnm2 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.113e-17
Identity = 53/136 (38.97%), Postives = 74/136 (54.41%), Query Frame = 1
Query:   67 DLTHDETTIIAGALELTEKTAKDAMTPISKAFSXXXXXXXXXXXXNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLR---KMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYQDLNEKKEGELF 465
            DL  +E  II GALEL  KT +D MTP+   F             + IM  G++R+PV+ G  +NI+ L+ VK+L  VD  D  PL+   K     +  V  D  L  +L EF+KG SH+A+V Q +N + EG+ F
Sbjct:  426 DLVKEELNIIQGALELRTKTVEDVMTPLRDCFMITGEAILDFNTMSEIMESGYTRIPVFEGERSNIVDLLFVKDLAFVDPDDCTPLKTITKFYNHPLHFVFNDTKLDAMLEEFKKGKSHLAIV-QRVNNEGEGDPF 560          
BLAST of CX675047 vs. ExPASy Swiss-Prot
Match: CNNM2_MOUSE (Metal transporter CNNM2 OS=Mus musculus GN=Cnnm2 PE=1 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 4.113e-17
Identity = 53/136 (38.97%), Postives = 74/136 (54.41%), Query Frame = 1
Query:   67 DLTHDETTIIAGALELTEKTAKDAMTPISKAFSXXXXXXXXXXXXNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLR---KMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYQDLNEKKEGELF 465
            DL  +E  II GALEL  KT +D MTP+   F             + IM  G++R+PV+ G  +NI+ L+ VK+L  VD  D  PL+   K     +  V  D  L  +L EF+KG SH+A+V Q +N + EG+ F
Sbjct:  426 DLVKEELNIIQGALELRTKTVEDVMTPLRDCFMITGEAILDFNTMSEIMESGYTRIPVFEGERSNIVDLLFVKDLAFVDPDDCTPLKTITKFYNHPLHFVFNDTKLDAMLEEFKKGKSHLAIV-QRVNNEGEGDPF 560          
BLAST of CX675047 vs. ExPASy Swiss-Prot
Match: CNNM2_HUMAN (Metal transporter CNNM2 OS=Homo sapiens GN=CNNM2 PE=2 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 4.113e-17
Identity = 53/136 (38.97%), Postives = 74/136 (54.41%), Query Frame = 1
Query:   67 DLTHDETTIIAGALELTEKTAKDAMTPISKAFSXXXXXXXXXXXXNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLR---KMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYQDLNEKKEGELF 465
            DL  +E  II GALEL  KT +D MTP+   F             + IM  G++R+PV+ G  +NI+ L+ VK+L  VD  D  PL+   K     +  V  D  L  +L EF+KG SH+A+V Q +N + EG+ F
Sbjct:  426 DLVKEELNIIQGALELRTKTVEDVMTPLRDCFMITGEAILDFNTMSEIMESGYTRIPVFEGERSNIVDLLFVKDLAFVDPDDCTPLKTITKFYNHPLHFVFNDTKLDAMLEEFKKGKSHLAIV-QRVNNEGEGDPF 560          
BLAST of CX675047 vs. ExPASy Swiss-Prot
Match: MAM3_YEAST (Protein MAM3 OS=Saccharomyces cerevisiae GN=MAM3 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 7.757e-16
Identity = 48/146 (32.88%), Postives = 76/146 (52.05%), Query Frame = 1
Query:    1 LLRRAELKTFVNFHGNEAGKGGDLTHDETTIIAGALELTEKTAKDAMTPISKAFSXXXXXXXXXXXXNAIMTMGHSRVPVYSGN-PTNIIGLILVKNLLSVDYRDAVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYQD 435
            + +++ LKT V  H     +   LT DE TII+  L+L  K  ++ MTPI   F+              I   G SR+P++  N P N IG++LV+ L+S D  D +P+    +  +P  S +    +ILN FQ+G +H+ VV ++
Sbjct:  215 MYKKSGLKTLVTLHRTMGVER--LTKDEVTIISAVLDLKAKRVEEIMTPIENVFTMSADTILDDKTVEKIFNSGFSRIPIFLPNEPNNFIGMLLVRVLISYDPDDCLPISHFPLATLPETSPNTSCLNILNYFQEGKAHMCVVSKE 358          
BLAST of CX675047 vs. ExPASy Swiss-Prot
Match: CNNM4_XENTR (Metal transporter CNNM4 OS=Xenopus tropicalis GN=cnnm4 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.028e-15
Identity = 48/135 (35.56%), Postives = 71/135 (52.59%), Query Frame = 1
Query:   70 LTHDETTIIAGALELTEKTAKDAMTPISKAFSXXXXXXXXXXXXNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPL---RKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYQDLNEKKEGELF 465
            +  +E  II GALEL  KT +D MT +   F             ++IM  G++R+PVY    +NI+ ++ VK+L  VD  D  PL    +     +  V  D  L  +L EF+KG SH+A+V Q +N + EG+ F
Sbjct:  351 IVREEMNIIQGALELRTKTVEDVMTKVEDCFMLPSDAVLDFNTMSSIMESGYTRIPVYENERSNIVDILYVKDLAFVDPDDCTPLSTITRFYSHPLHFVFSDTKLDAVLEEFKKGKSHLAIV-QKVNSEGEGDPF 484          
BLAST of CX675047 vs. ExPASy Swiss-Prot
Match: CNNM4_HUMAN (Metal transporter CNNM4 OS=Homo sapiens GN=CNNM4 PE=1 SV=3)

HSP 1 Score: 80.4925 bits (197), Expect = 1.120e-14
Identity = 48/136 (35.29%), Postives = 72/136 (52.94%), Query Frame = 1
Query:   67 DLTHDETTIIAGALELTEKTAKDAMTPISKAFSXXXXXXXXXXXXNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLR---KMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYQDLNEKKEGELF 465
            DL  +E  +I GALEL  KT +D MT +   F             + IM  G++R+PV+    +NI+ ++ VK+L  VD  D  PL+   +     +  V  D  L  +L EF+KG SH+A+V Q +N + EG+ F
Sbjct:  353 DLVKEELNMIQGALELRTKTVEDIMTQLQDCFMIRSDAILDFNTMSEIMESGYTRIPVFEDEQSNIVDILYVKDLAFVDPDDCTPLKTITRFYNHPVHFVFHDTKLDAMLEEFKKGKSHLAIV-QKVNNEGEGDPF 487          
BLAST of CX675047 vs. ExPASy Swiss-Prot
Match: CNNM4_RAT (Metal transporter CNNM4 OS=Rattus norvegicus GN=Cnnm4 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.463e-14
Identity = 48/136 (35.29%), Postives = 72/136 (52.94%), Query Frame = 1
Query:   67 DLTHDETTIIAGALELTEKTAKDAMTPISKAFSXXXXXXXXXXXXNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLR---KMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYQDLNEKKEGELF 465
            DL  +E  +I GALEL  KT +D MT +   F             + IM  G++R+PV+    +NI+ ++ VK+L  VD  D  PL+   +     +  V  D  L  +L EF+KG SH+A+V Q +N + EG+ F
Sbjct:  351 DLVKEELNMIQGALELRTKTVEDIMTQLHDCFMIRSDAILDFNTMSEIMESGYTRIPVFEDEQSNIVDILYVKDLAFVDPDDCTPLKTITRFYNHPVHFVFHDTKLDAMLEEFKKGKSHLAIV-QKVNNEGEGDPF 485          
BLAST of CX675047 vs. ExPASy Swiss-Prot
Match: CNNM4_MOUSE (Metal transporter CNNM4 OS=Mus musculus GN=Cnnm4 PE=1 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.463e-14
Identity = 48/136 (35.29%), Postives = 72/136 (52.94%), Query Frame = 1
Query:   67 DLTHDETTIIAGALELTEKTAKDAMTPISKAFSXXXXXXXXXXXXNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLR---KMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYQDLNEKKEGELF 465
            DL  +E  +I GALEL  KT +D MT +   F             + IM  G++R+PV+    +NI+ ++ VK+L  VD  D  PL+   +     +  V  D  L  +L EF+KG SH+A+V Q +N + EG+ F
Sbjct:  350 DLVKEELNMIQGALELRTKTVEDIMTQLHDCFMIRSDAILDFNTMSEIMESGYTRIPVFEDEQSNIVDILYVKDLAFVDPDDCTPLKTITRFYNHPVHFVFHDTKLDAMLEEFKKGKSHLAIV-QKVNNEGEGDPF 484          
BLAST of CX675047 vs. ExPASy Swiss-Prot
Match: CNNM1_MOUSE (Metal transporter CNNM1 OS=Mus musculus GN=Cnnm1 PE=1 SV=4)

HSP 1 Score: 79.7221 bits (195), Expect = 1.911e-14
Identity = 49/137 (35.77%), Postives = 73/137 (53.28%), Query Frame = 1
Query:   67 DLTHDETTIIAGALELTEKTAKDAMTPISKAFSXXXXXXXXXXXXNAIMTMGHSRVPVYSGNPT-NIIGLILVKNLLSVDYRDAVPL---RKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYQDLNEKKEGELF 465
            DL  +E  II GALEL  K  ++ +TP+   F             + I+  G++R+PVY G+   NI+ ++ VK+L  VD  D  PL    +   R +  V  D  L  +L EF+KG SH+A+V Q +N + EG+ F
Sbjct:  338 DLVKEELNIIQGALELRTKVVEEVLTPLGDCFMLRSDAVLDFATVSEILRSGYTRIPVYEGDQRHNIVDILFVKDLAFVDPDDCTPLLTVTRFYNRPLHCVFNDTRLDTVLEEFKKGKSHLAIV-QRVNNEGEGDPF 473          
BLAST of CX675047 vs. ExPASy Swiss-Prot
Match: CNNM1_HUMAN (Metal transporter CNNM1 OS=Homo sapiens GN=CNNM1 PE=2 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 1.911e-14
Identity = 49/137 (35.77%), Postives = 73/137 (53.28%), Query Frame = 1
Query:   67 DLTHDETTIIAGALELTEKTAKDAMTPISKAFSXXXXXXXXXXXXNAIMTMGHSRVPVYSGNPT-NIIGLILVKNLLSVDYRDAVPL---RKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYQDLNEKKEGELF 465
            DL  +E  II GALEL  K  ++ +TP+   F             + I+  G++R+PVY G+   NI+ ++ VK+L  VD  D  PL    +   R +  V  D  L  +L EF+KG SH+A+V Q +N + EG+ F
Sbjct:  338 DLVKEELNIIQGALELRTKVVEEVLTPLGDCFMLRSDAVLDFATVSEILRSGYTRIPVYEGDQRHNIVDILFVKDLAFVDPDDCTPLLTVTRFYNRPLHCVFNDTRLDTVLEEFKKGKSHLAIV-QRVNNEGEGDPF 473          
The following BLAST results are available for this feature:
BLAST of CX675047 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
CNNM2_RAT4.113e-1738.97Metal transporter CNNM2 OS=Rattus norvegicus GN=Cn... [more]
CNNM2_MOUSE4.113e-1738.97Metal transporter CNNM2 OS=Mus musculus GN=Cnnm2 P... [more]
CNNM2_HUMAN4.113e-1738.97Metal transporter CNNM2 OS=Homo sapiens GN=CNNM2 P... [more]
MAM3_YEAST7.757e-1632.88Protein MAM3 OS=Saccharomyces cerevisiae GN=MAM3 P... [more]
CNNM4_XENTR5.028e-1535.56Metal transporter CNNM4 OS=Xenopus tropicalis GN=c... [more]
CNNM4_HUMAN1.120e-1435.29Metal transporter CNNM4 OS=Homo sapiens GN=CNNM4 P... [more]
CNNM4_RAT1.463e-1435.29Metal transporter CNNM4 OS=Rattus norvegicus GN=Cn... [more]
CNNM4_MOUSE1.463e-1435.29Metal transporter CNNM4 OS=Mus musculus GN=Cnnm4 P... [more]
CNNM1_MOUSE1.911e-1435.77Metal transporter CNNM1 OS=Mus musculus GN=Cnnm1 P... [more]
CNNM1_HUMAN1.911e-1435.77Metal transporter CNNM1 OS=Homo sapiens GN=CNNM1 P... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_59D08_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-59D08-G15-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675047 ID=CX675047; Name=CX675047; organism=Citrus sinensis; type=EST; length=762bp
CTTTTAAGGAGGGCAGAGCTAAAGACTTTTGTTAACTTTCATGGCAATGA
GGCTGGGAAAGGTGGGGATCTAACTCATGATGAGACTACTATCATCGCTG
GAGCTCTGGAGTTGACTGAAAAAACTGCAAAAGATGCCATGACTCCCATA
TCGAAGGCATTTTCTCTTGATCTGGATGCAACACTTACTTTGGATACCTT
AAATGCCATAATGACCATGGGTCATAGTAGAGTTCCTGTTTACTCTGGGA
ATCCGACAAATATAATTGGCCTCATTCTGGTTAAAAATCTTTTATCAGTC
GATTATAGAGATGCAGTTCCTTTGCGGAAAATGATCATACGGAGAATACC
ACGGGTTTCAGAAGACATGCCTTTGTATGATATTCTAAATGAATTTCAGA
AAGGACATAGCCACATTGCTGTTGTATATCAGGATCTAAATGAGAAAAAA
GAGGGTGAGCTTTTTAAGGACAATTGTAAGAAGCCAAGAGGACAACCTGA
GAAATCATCTCATAAAGTTGATAATGGGGTTACTGCTGCTGGCCAGAATT
TGCGGAATAAATTGGAATCAAAAGATGCTCAACAGACTAAGAAAGTTCCA
CCAGCTACTCCTACCTTTAATAAGCGACACAGAGGTTGTTCGTACTGCAT
TCTCGACTTTGAGAATGGTCCTTTTCCAGATTTTCCATCCAATGACGAAG
CCGTAGGTGTTATTACCATGGAGGATGTCATTGAAGAACTTCTTCAGGAG
GAGATACTGGAT
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