CX675045
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX675045 vs. ExPASy Swiss-Prot
Match: RL71_ARATH (60S ribosomal protein L7-1 OS=Arabidopsis thaliana GN=RPL7A PE=2 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 2.423e-37 Identity = 83/146 (56.85%), Postives = 105/146 (71.92%), Query Frame = -2 Query: 98 MAEEAAQQPLAFVAETVLKKRKSTEALALTRKAQLELGKYGHGQKNKKSKVEDIKRPEQFIKQYRDQELDLIRMKQRGKRSKKVIGKPKSKLLFIIRIQGTSDMHPKTKKILYNLRLRRIFSGVFVRANDGMLEVLQKVEPYVTYG 535 MAEE A+ L ++ E VLKKRK+ + LA RK QLELG G KK KV DIKRPE F+ ++R +E+D+IRMKQR KR K KS L+FIIRIQG +DMHPKTK+IL NL+L+ +F+GVF +A D + + L KV+PYVTYG Sbjct: 1 MAEEEAKG-LDYIPEIVLKKRKNRDELAFIRKKQLELGNSG----KKKKKVSDIKRPEDFVHEFRAKEVDMIRMKQRVKRPKSSPPPVKSDLVFIIRIQGKNDMHPKTKRILNNLQLKSVFTGVFAKATDSLFQKLLKVQPYVTYG 141
BLAST of CX675045 vs. ExPASy Swiss-Prot
Match: RL72_ARATH (60S ribosomal protein L7-2 OS=Arabidopsis thaliana GN=RPL7B PE=1 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.247e-25 Identity = 63/134 (47.01%), Postives = 90/134 (67.16%), Query Frame = -2 Query: 98 VAETVLKKRKSTEALALTRKAQLELGKYGHGQKNKKSKVEDIKRPEQFIKQYRDQELDLIRMKQRGKRSKKVIGKPKSKLLFIIRIQGTSDMHPKTKKILYNLRLRRIFSGVFVRANDGMLEVLQKVEPYVTYG 499 V E+VLKKRK E AL +K +E K +KN +++ KR EQ+ K+Y ++E +LI +K+ K P++KLLFIIRI+G + + PKTKKIL LRLR+IF+GVF++ N + +L++VEPYVTYG Sbjct: 8 VPESVLKKRKREEEWALEKKQNVEAAK----KKNAENRKLIFKRAEQYSKEYAEKEKELISLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATMNMLRRVEPYVTYG 137
BLAST of CX675045 vs. ExPASy Swiss-Prot
Match: RL74_ARATH (60S ribosomal protein L7-4 OS=Arabidopsis thaliana GN=RPL7D PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.629e-25 Identity = 62/134 (46.27%), Postives = 90/134 (67.16%), Query Frame = -2 Query: 98 VAETVLKKRKSTEALALTRKAQLELGKYGHGQKNKKSKVEDIKRPEQFIKQYRDQELDLIRMKQRGKRSKKVIGKPKSKLLFIIRIQGTSDMHPKTKKILYNLRLRRIFSGVFVRANDGMLEVLQKVEPYVTYG 499 V E+VLKKRK E AL +K +LE K + +K K R +Q+ K+Y+++E +LI++K+ K P++KLLFIIRI+G + + PKTKKIL LRLR+IF+GVF++ N + +L++VEPYVTYG Sbjct: 10 VPESVLKKRKREEEWALAKKQELEAAKKQNAEKRKLI----FNRAKQYSKEYQEKERELIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVTYG 139
BLAST of CX675045 vs. ExPASy Swiss-Prot
Match: RL73_ARATH (60S ribosomal protein L7-3 OS=Arabidopsis thaliana GN=RPL7C PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 1.991e-23 Identity = 60/134 (44.78%), Postives = 89/134 (66.42%), Query Frame = -2 Query: 98 VAETVLKKRKSTEALALTRKAQLELGKYGHGQKNKKSKVEDIKRPEQFIKQYRDQELDLIRMKQRGKRSKKVIGKPKSKLLFIIRIQGTSDMHPKTKKILYNLRLRRIFSGVFVRANDGMLEVLQKVEPYVTYG 499 V E+VLKK K E AL +K + K +K+ +++ KR EQ+ K+Y +++ +LIR+K+ K P++KLLFIIRI+G + + PKTKKIL LRLR+IF+GVF++ N + +L++VEPYVTYG Sbjct: 8 VPESVLKKIKRQEEWALAKKDEAVAAK----KKSVEARKLIFKRAEQYAKEYAEKDNELIRLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATVNMLRRVEPYVTYG 137
BLAST of CX675045 vs. ExPASy Swiss-Prot
Match: RL7A_SCHPO (60S ribosomal protein L7-A OS=Schizosaccharomyces pombe GN=rpl7a PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 3.515e-20 Identity = 61/147 (41.50%), Postives = 84/147 (57.14%), Query Frame = -2 Query: 98 MAEEA-AQQPLAFVAETVLKKRKSTEALALTRKAQLELGKYGHGQKNKKSKVEDIKRPEQFIKQYRDQELDLIRMKQRGKRSKKVIGKPKSKLLFIIRIQGTSDMHPKTKKILYNLRLRRIFSGVFVRANDGMLEVLQKVEPYVTYG 535 MAE+A Q E +LKKRK E TRK ++E + KK++ E KR E FI YR +E + IR+ + K + ++KLLF+IRI G +M PK +K+L LRL RI + VFVR N + ++L+ VEPYV YG Sbjct: 1 MAEDAPVVQQTMLEPEVLLKKRKVNER---TRKERVEQA-IAKKEAQKKNRKETFKRAETFINNYRQRERERIRLNRSAKNKGDIFVPDETKLLFVIRIAGVKNMPPKIRKVLRLLRLSRINNAVFVRNNKAVAQMLRIVEPYVMYG 143
BLAST of CX675045 vs. ExPASy Swiss-Prot
Match: RL7_NEUCR (60S ribosomal protein L7 OS=Neurospora crassa GN=rpl-7 PE=3 SV=2) HSP 1 Score: 97.8265 bits (242), Expect = 4.590e-20 Identity = 55/134 (41.04%), Postives = 83/134 (61.94%), Query Frame = -2 Query: 98 VAETVLKKRKSTEALALTRKAQLELGKYGHGQKNKKSKVEDIKRPEQFIKQYRDQELDLIRMKQRGKRSKKVIGKPKSKLLFIIRIQGTSDMHPKTKKILYNLRLRRIFSGVFVRANDGMLEVLQKVEPYVTYG 499 V ET+LKKRKS E R+A++E K NK+ + KR E ++K+YRD E + IR+++ K+ ++KL+F+IRI+G + + PK +KIL LRL +I +GVFVR E+++ VEP+V YG Sbjct: 13 VPETLLKKRKSQEKARAERQAEIEKKKAA----NKEKRAVIFKRAETYVKEYRDVEREKIRLQRAAKQDGSFHIPAEAKLIFLIRIKGINKIPPKPRKILQLLRLLQINNGVFVRVTKATAEMIKIVEPWVAYG 142
BLAST of CX675045 vs. ExPASy Swiss-Prot
Match: RL7_CAEEL (60S ribosomal protein L7 OS=Caenorhabditis elegans GN=rpl-7 PE=1 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 8.657e-19 Identity = 52/134 (38.81%), Postives = 83/134 (61.94%), Query Frame = -2 Query: 98 VAETVLKKRKSTEALALTRKAQLELGKYGHGQKNKKSKVEDIKRPEQFIKQYRDQELDLIRMKQRGKRSKKVIGKPKSKLLFIIRIQGTSDMHPKTKKILYNLRLRRIFSGVFVRANDGMLEVLQKVEPYVTYG 499 V ETVLK+RK A A T+ AQ K KNK+ K + KR E+++++YR+ + + +R+K+ + + K+ F++RI+G + +HPK +K L LRLR+I +GVFV+ N L +L+ +EPYV +G Sbjct: 10 VPETVLKRRKQ-RADARTKAAQ---HKVTVAAKNKEKKTQYFKRAEKYVQEYRNAQKEGLRLKREAEAKGDFYVPAEHKVAFVVRIRGINQLHPKPRKALQILRLRQINNGVFVKLNKATLPLLRIIEPYVAWG 139
BLAST of CX675045 vs. ExPASy Swiss-Prot
Match: RL7_YARLI (60S ribosomal protein L7 OS=Yarrowia lipolytica GN=RPL7 PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.477e-18 Identity = 50/134 (37.31%), Postives = 81/134 (60.45%), Query Frame = -2 Query: 98 VAETVLKKRKSTEALALTRKAQLELGKYGHGQKNKKSKVEDIKRPEQFIKQYRDQELDLIRMKQRGKRSKKVIGKPKSKLLFIIRIQGTSDMHPKTKKILYNLRLRRIFSGVFVRANDGMLEVLQKVEPYVTYG 499 V ET+LKKRK+ + + ++A K + +K+K R E+++K+YR+ E + IR+++ K + + KL+F+IRI+G S M PK +K+L LRL +I +GVFVR E+L+ VEPY+ +G Sbjct: 14 VPETLLKKRKNADQIRAAKEAAAAEKKAANAEKDKVI----FSRAEKYVKEYREAEREQIRLRREAKLNGTFYVPAEPKLVFVIRIKGISKMAPKPRKVLQLLRLHQINNGVFVRITKATAELLRIVEPYIAFG 143
BLAST of CX675045 vs. ExPASy Swiss-Prot
Match: RL7_DICDI (60S ribosomal protein L7 OS=Dictyostelium discoideum GN=rpl7 PE=1 SV=3) HSP 1 Score: 90.1225 bits (222), Expect = 9.572e-18 Identity = 48/136 (35.29%), Postives = 82/136 (60.29%), Query Frame = -2 Query: 98 VAETVLKKRKSTEALALTRKAQLELGKYGHGQKNKKSKVEDI--KRPEQFIKQYRDQELDLIRMKQRGKRSKKVIGKPKSKLLFIIRIQGTSDMHPKTKKILYNLRLRRIFSGVFVRANDGMLEVLQKVEPYVTYG 499 V E++LKKR A ++K +++ K G Q+ + S++ + KR E+++ +Y E + IR+ + K S P +K+ F+IRI+G + + PK +K+L LRL ++ +GVFV+ N + +L+ VEPYV YG Sbjct: 12 VPESILKKR------ATSQKKAVDVAKLGRAQQLRNSRLNSVYFKRAEKYVSEYHKTEREAIRLNRIAKNSGTFYVPPAAKVAFVIRIRGINGVSPKPRKVLKLLRLLQLNNGVFVKLNKASINMLKLVEPYVAYG 141
BLAST of CX675045 vs. ExPASy Swiss-Prot
Match: RL7C_SCHPO (60S ribosomal protein L7-C OS=Schizosaccharomyces pombe GN=rpl7c PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.607e-15 Identity = 50/135 (37.04%), Postives = 78/135 (57.78%), Query Frame = -2 Query: 98 FVAETVLKKRKSTEALALTRKAQLELGKYGHGQKNKKSKVEDIKRPEQFIKQYRDQELDLIRMKQRGKRSKKVIGKPKSKLLFIIRIQGTSDMHPKTKKILYNLRLRRIFSGVFVRANDGMLEVLQKVEPYVTYG 502 F E++LKK+K+ E R A K Q+ K+ + KR E + +YR E + I + ++ + ++KL+F+IRI+G +++ PK +KI+ LRL +I +GVFV+ N E+LQ VEPYVTYG Sbjct: 15 FAPESLLKKKKTQEQSREQRVAAAAEKKAA--QQKKRELIA--KRAESYDAEYRKAEREQIELGRKARAEGNYYVPDETKLVFVIRIRGINNIPPKARKIMQLLRLIQINNGVFVKFNKATKEMLQVVEPYVTYG 145 The following BLAST results are available for this feature:
BLAST of CX675045 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
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Sequences
The
following sequences are available for this feature:
EST sequence >CX675045 ID=CX675045; Name=CX675045; organism=Citrus sinensis; type=EST; length=620bpback to top |