EY665777

Overview
NameEY665777
Unique NameEY665777
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length859
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY665777_ssr450 microsatellite EY665777_ssr450:450..459. BLAST: Citrus ESTs to Prunus persica proteins V1
EY665777_ssr700 microsatellite EY665777_ssr700:700..711. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY665777 vs. ExPASy Swiss-Prot
Match: CAH2_FLALI (Carbonic anhydrase 2 (Fragment) OS=Flaveria linearis PE=2 SV=1)

HSP 1 Score: 233.417 bits (594), Expect = 1.245e-60
Identity = 113/142 (79.58%), Postives = 121/142 (85.21%), Query Frame = 2 
Query:   23 KGQSPKFLXFACPFSRVCPSHILNFQPGEAFMVRNIAPMVPPYDQKKYSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDNGTTASDFIEEWVKICSSAKSNVTKECNDLSFEDQCQTCEREGVNVFLGNLLTYPF 448
            KGQSPKFL FAC  SRVCPSHIL+FQPGEAF+VRNIA MVPPYD  K+SGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPD+GT ASDFIE+WVK+   AKS V   CN+L F D C  CE+E VNV LGNLLTYPF
Sbjct:   10 KGQSPKFLVFACSDSRVCPSHILDFQPGEAFVVRNIANMVPPYDTIKHSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDDGTPASDFIEQWVKLGLPAKSKVKANCNNLEFADLCTKCEKEAVNVSLGNLLTYPF 151
[Close]
BLAST of EY665777 vs. ExPASy Swiss-Prot
Match: CAHC_ARATH (Carbonic anhydrase, chloroplastic OS=Arabidopsis thaliana GN=CA1 PE=1 SV=2)

HSP 1 Score: 220.705 bits (561), Expect = 8.351e-57
Identity = 104/142 (73.24%), Postives = 117/142 (82.39%), Query Frame = 2 
Query:   23 KGQSPKFLXFACPFSRVCPSHILNFQPGEAFMVRNIAPMVPPYDQKKYSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDNGTTASDFIEEWVKICSSAKSNVTKECNDLSFEDQCQTCEREGVNVFLGNLLTYPF 448
            KGQSPK++ FAC  SRVCPSH+L+FQPG+AF+VRNIA MVPP+D+ KY G GAAIEYAVLHLKVENIVVIGHS CGGIKGLMS P +G  ++DFIE+WVKIC  AKS V  E  D +FEDQC  CERE VNV L NLLTYPF
Sbjct:  156 KGQSPKYMVFACSDSRVCPSHVLDFQPGDAFVVRNIANMVPPFDKVKYGGVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMSFPLDGNNSTDFIEDWVKICLPAKSKVISELGDSAFEDQCGRCEREAVNVSLANLLTYPF 297
[Close]
BLAST of EY665777 vs. ExPASy Swiss-Prot
Match: CAHC_SPIOL (Carbonic anhydrase, chloroplastic OS=Spinacia oleracea PE=1 SV=2)

HSP 1 Score: 217.238 bits (552), Expect = 9.233e-56
Identity = 103/142 (72.54%), Postives = 116/142 (81.69%), Query Frame = 2 
Query:   23 KGQSPKFLXFACPFSRVCPSHILNFQPGEAFMVRNIAPMVPPYDQKKYSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDNGTTASDFIEEWVKICSSAKSNVTKECNDLSFEDQCQTCEREGVNVFLGNLLTYPF 448
            KGQ+PKF+ FAC  SRVCPSH+L+FQPGEAFMVRNIA MVP +D+ KY+G GAAIEYAVLHLKVENIVVIGHS CGGIKGLMS PD G T +DFIE+WVKIC  AK  V  E  + +F +QC  CE+E VNV LGNLLTYPF
Sbjct:  139 KGQAPKFMVFACSDSRVCPSHVLDFQPGEAFMVRNIANMVPVFDKDKYAGVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMSFPDAGPTTTDFIEDWVKICLPAKHKVLAEHGNATFAEQCTHCEKEAVNVSLGNLLTYPF 280
[Close]
BLAST of EY665777 vs. ExPASy Swiss-Prot
Match: CAH2_ARATH (Carbonic anhydrase 2 OS=Arabidopsis thaliana GN=CA2 PE=1 SV=2)

HSP 1 Score: 216.468 bits (550), Expect = 1.575e-55
Identity = 102/142 (71.83%), Postives = 116/142 (81.69%), Query Frame = 2 
Query:   23 KGQSPKFLXFACPFSRVCPSHILNFQPGEAFMVRNIAPMVPPYDQKKYSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDNGTTASDFIEEWVKICSSAKSNVTKECNDLSFEDQCQTCEREGVNVFLGNLLTYPF 448
            KGQSPK++ FAC  SRVCPSH+L+F PG+AF+VRNIA MVPP+D+ KY+G GAAIEYAVLHLKVENIVVIGHS CGGIKGLMS P +G  ++DFIE+WVKIC  AKS V  E    +FEDQC  CERE VNV L NLLTYPF
Sbjct:   79 KGQSPKYMVFACSDSRVCPSHVLDFHPGDAFVVRNIANMVPPFDKVKYAGVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMSFPLDGNNSTDFIEDWVKICLPAKSKVLAESESSAFEDQCGRCEREAVNVSLANLLTYPF 220
[Close]
BLAST of EY665777 vs. ExPASy Swiss-Prot
Match: CAHX_FLAPR (Carbonic anhydrase OS=Flaveria pringlei PE=2 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 2.475e-55
Identity = 99/142 (69.72%), Postives = 115/142 (80.99%), Query Frame = 2 
Query:   23 KGQSPKFLXFACPFSRVCPSHILNFQPGEAFMVRNIAPMVPPYDQKKYSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDNGTTASDFIEEWVKICSSAKSNVTKECNDLSFEDQCQTCEREGVNVFLGNLLTYPF 448
            KGQSPKF+ FAC  SRVCPSH+L+FQPGEAF+VRN+A MVPP+D+ KYSG GAA+EYAVLHLKV+ I VIGHS CGGIKGLM+ PD G  ++DFIE+WVK+C  AKS V  E N    +DQC  CE+E VNV LGNLLTYPF
Sbjct:  149 KGQSPKFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANMVPPFDKTKYSGVGAAVEYAVLHLKVQEIFVIGHSRCGGIKGLMTFPDEGPHSTDFIEDWVKVCLPAKSKVVAEHNGTHLDDQCVLCEKEAVNVSLGNLLTYPF 290

HSP 2 Score: 23.0978 bits (48), Expect = 2.475e-55
Identity = 9/14 (64.29%), Postives = 11/14 (78.57%), Query Frame = 1 
Query:  478 LAVNGRTYDFLNGT 519
            LA+ G  YDF+NGT
Sbjct:  300 LALKGGHYDFVNGT 313
[Close]
BLAST of EY665777 vs. ExPASy Swiss-Prot
Match: CAHX_FLABR (Carbonic anhydrase OS=Flaveria brownii PE=2 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 2.475e-55
Identity = 99/142 (69.72%), Postives = 115/142 (80.99%), Query Frame = 2 
Query:   23 KGQSPKFLXFACPFSRVCPSHILNFQPGEAFMVRNIAPMVPPYDQKKYSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDNGTTASDFIEEWVKICSSAKSNVTKECNDLSFEDQCQTCEREGVNVFLGNLLTYPF 448
            KGQSPKF+ FAC  SRVCPSH+L+FQPGEAF+VRN+A MVPP+D+ KYSG GAA+EYAVLHLKV+ I VIGHS CGGIKGLM+ PD G  ++DFIE+WVK+C  AKS V  E N    +DQC  CE+E VNV LGNLLTYPF
Sbjct:  150 KGQSPKFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANMVPPFDKTKYSGVGAAVEYAVLHLKVQEIFVIGHSRCGGIKGLMTFPDEGPHSTDFIEDWVKVCLPAKSKVVAEHNGTHLDDQCVLCEKEAVNVSLGNLLTYPF 291

HSP 2 Score: 23.0978 bits (48), Expect = 2.475e-55
Identity = 9/14 (64.29%), Postives = 11/14 (78.57%), Query Frame = 1 
Query:  478 LAVNGRTYDFLNGT 519
            LA+ G  YDF+NGT
Sbjct:  301 LALKGGHYDFVNGT 314
[Close]
BLAST of EY665777 vs. ExPASy Swiss-Prot
Match: CAHX_FLABI (Carbonic anhydrase OS=Flaveria bidentis PE=2 SV=2)

HSP 1 Score: 214.542 bits (545), Expect = 2.475e-55
Identity = 99/142 (69.72%), Postives = 115/142 (80.99%), Query Frame = 2 
Query:   23 KGQSPKFLXFACPFSRVCPSHILNFQPGEAFMVRNIAPMVPPYDQKKYSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDNGTTASDFIEEWVKICSSAKSNVTKECNDLSFEDQCQTCEREGVNVFLGNLLTYPF 448
            KGQSPKF+ FAC  SRVCPSH+L+FQPGEAF+VRN+A MVPP+D+ KYSG GAA+EYAVLHLKV+ I VIGHS CGGIKGLM+ PD G  ++DFIE+WVK+C  AKS V  E N    +DQC  CE+E VNV LGNLLTYPF
Sbjct:  150 KGQSPKFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANMVPPFDKTKYSGVGAAVEYAVLHLKVQEIFVIGHSRCGGIKGLMTFPDEGPHSTDFIEDWVKVCLPAKSKVVAEHNGTHLDDQCVLCEKEAVNVSLGNLLTYPF 291

HSP 2 Score: 23.0978 bits (48), Expect = 2.475e-55
Identity = 9/14 (64.29%), Postives = 11/14 (78.57%), Query Frame = 1 
Query:  478 LAVNGRTYDFLNGT 519
            LA+ G  YDF+NGT
Sbjct:  301 LALKGGHYDFVNGT 314
[Close]
BLAST of EY665777 vs. ExPASy Swiss-Prot
Match: CAH1_FLALI (Carbonic anhydrase 1 OS=Flaveria linearis PE=2 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 2.475e-55
Identity = 99/142 (69.72%), Postives = 115/142 (80.99%), Query Frame = 2 
Query:   23 KGQSPKFLXFACPFSRVCPSHILNFQPGEAFMVRNIAPMVPPYDQKKYSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDNGTTASDFIEEWVKICSSAKSNVTKECNDLSFEDQCQTCEREGVNVFLGNLLTYPF 448
            KGQSPKF+ FAC  SRVCPSH+L+FQPGEAF+VRN+A MVPP+D+ KYSG GAA+EYAVLHLKV+ I VIGHS CGGIKGLM+ PD G  ++DFIE+WVK+C  AKS V  E N    +DQC  CE+E VNV LGNLLTYPF
Sbjct:  150 KGQSPKFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANMVPPFDKTKYSGVGAAVEYAVLHLKVQEIFVIGHSRCGGIKGLMTFPDEGPHSTDFIEDWVKVCLPAKSKVVAEHNGTHLDDQCVQCEKEAVNVSLGNLLTYPF 291

HSP 2 Score: 23.0978 bits (48), Expect = 2.475e-55
Identity = 9/14 (64.29%), Postives = 11/14 (78.57%), Query Frame = 1 
Query:  478 LAVNGRTYDFLNGT 519
            LA+ G  YDF+NGT
Sbjct:  301 LALKGGHYDFVNGT 314
[Close]
BLAST of EY665777 vs. ExPASy Swiss-Prot
Match: CAHC_TOBAC (Carbonic anhydrase, chloroplastic OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.584e-54
Identity = 103/142 (72.54%), Postives = 116/142 (81.69%), Query Frame = 2 
Query:   23 KGQSPKFLXFACPFSRVCPSHILNFQPGEAFMVRNIAPMVPPYDQKKYSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDNGTTASDFIEEWVKICSSAKSNVTKECNDLSFEDQCQTCEREGVNVFLGNLLTYPF 448
            KGQSPKF+ FAC  SRVCPSH+LNFQPGEAF+VRNIA MVP YD+ +YSG GAAIEYAVLHLKVENIVVIGHS CGGIKGLMS+P +G+ ++ FIE+WVKI   AK+ V  E  D  F DQC  CE+E VNV LGNLLTYPF
Sbjct:  141 KGQSPKFMVFACSDSRVCPSHVLNFQPGEAFVVRNIANMVPAYDKTRYSGVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMSLPADGSESTAFIEDWVKIGLPAKAKVQGEHVDKCFADQCTACEKEAVNVSLGNLLTYPF 282

HSP 2 Score: 21.9422 bits (45), Expect = 1.584e-54
Identity = 12/25 (48.00%), Postives = 16/25 (64.00%), Query Frame = 1 
Query:  442 PILRERA**RTPLAVNGRTYDFLNG 516
            P +RE    +T LA+ G  YDF+NG
Sbjct:  281 PFVREGLVKKT-LALKGGHYDFVNG 304
[Close]
BLAST of EY665777 vs. ExPASy Swiss-Prot
Match: CAHC_PEA (Carbonic anhydrase, chloroplastic OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 9.554e-53
Identity = 98/142 (69.01%), Postives = 113/142 (79.58%), Query Frame = 2 
Query:   23 KGQSPKFLXFACPFSRVCPSHILNFQPGEAFMVRNIAPMVPPYDQKKYSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDNGTTASDFIEEWVKICSSAKSNVTKECNDLSFEDQCQTCEREGVNVFLGNLLTYPF 448
            KGQSP F+ FAC  SRVCPSH+L+FQPGEAF+VRN+A +VPPYDQ KY+G GAAIEYAVLHLKV NIVVIGHS CGGIKGL+S P +GT ++DFIEEWVKI   AK+ V  +  D  F + C  CE+E VN  LGNLLTYPF
Sbjct:  148 KGQSPPFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANLVPPYDQAKYAGTGAAIEYAVLHLKVSNIVVIGHSACGGIKGLLSFPFDGTYSTDFIEEWVKIGLPAKAKVKAQHGDAPFAELCTHCEKEAVNASLGNLLTYPF 289
The following BLAST results are available for this feature:
BLAST of EY665777 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
CAH2_FLALI1.245e-6079.58Carbonic anhydrase 2 (Fragment) OS=Flaveria linear... [more]
CAHC_ARATH8.351e-5773.24Carbonic anhydrase, chloroplastic OS=Arabidopsis t... [more]
CAHC_SPIOL9.233e-5672.54Carbonic anhydrase, chloroplastic OS=Spinacia oler... [more]
CAH2_ARATH1.575e-5571.83Carbonic anhydrase 2 OS=Arabidopsis thaliana GN=CA... [more]
CAHX_FLAPR2.475e-5569.72Carbonic anhydrase OS=Flaveria pringlei PE=2 SV=1[more]
CAHX_FLABR2.475e-5569.72Carbonic anhydrase OS=Flaveria brownii PE=2 SV=1[more]
CAHX_FLABI2.475e-5569.72Carbonic anhydrase OS=Flaveria bidentis PE=2 SV=2[more]
CAH1_FLALI2.475e-5569.72Carbonic anhydrase 1 OS=Flaveria linearis PE=2 SV=... [more]
CAHC_TOBAC1.584e-5472.54Carbonic anhydrase, chloroplastic OS=Nicotiana tab... [more]
CAHC_PEA9.554e-5369.01Carbonic anhydrase, chloroplastic OS=Pisum sativum... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-102-095-D12-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665777 ID=EY665777; Name=EY665777; organism=Citrus sinensis; type=EST; length=859bp
CTGATTTGTACGGTGCACCCTTAAAGGCCAAAGCCCCAAGTTTCTGGNAT
TTGCATGCCCTTTTTCGCGAGTATGTCCATCCCATATCCTCAATTTTCAA
CCAGGAGAGGCGTTTATGGTTCGAAACATTGCCCCTATGGTCCCTCCATA
TGACCAGAAAAAATACTCTGGAGCAGGTGCAGCCATTGAATATGCGGTGC
TACATCTGAAGGTGGAGAATATTGTAGTCATTGGACACAGTTGCTGTGGT
GGTATAAAGGGGCTCATGTCTATCCCTGATAATGGGACCACTGCGAGTGA
TTTCATAGAAGAGTGGGTCAAAATCTGTTCATCTGCCAAGTCCAACGTGA
CAAAAGAATGCAATGATTTGAGTTTTGAGGATCAATGCCAGACCTGTGAG
AGGGAGGGTGTGAATGTGTTCCTTGGAAACCTATTGACATACCCATTTTG
AGAGAGAGAGCGTGATGACGAACACCTTTGGCGGTGAACGGACGCACCTA
TGATTTCCTCAATGGGACCCTTGCGCCCTCGCGCCTCCACGCCCCCCCGC
CCACCGCCCGCCTCTGTCACACACCACCCGCCACCCCCCGGCGCCTAACC
GCCATCCCCCCGCCCGCCGCGCTCCGACGCTACCGCCGCTACCAGCTCCC
TCGAGCACACCCGCCTGTCCCTACCCGACCACCACCGCAACCATCATGCC
ACGCACGCACGAGCAACATCACCCGTCTCCAACGAACCAACTCCCCGCCC
CGCCCTCTCACACACGGCACGACCCGCGACCGCAGAGCGCCTGCCCCGAG
TCACCGTCGCCAGGCAACGACGATACCTAGCCACGCCGTGCAACCCGCCA
CTCACAGGC
back to top