EY665769

Overview
NameEY665769
Unique NameEY665769
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length851
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY665769_ssr701 microsatellite EY665769_ssr701:701..712. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY665769 vs. ExPASy Swiss-Prot
Match: ERD2_PETHY (ER lumen protein retaining receptor OS=Petunia hybrida GN=ERD2 PE=2 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 1.105e-77
Identity = 115/162 (70.99%), Postives = 143/162 (88.27%), Query Frame = 1
Query:   61 MNLFRLVGDMTHLLSIVVLLLKIRTTKSCAGISLKTQELYVLVFLSRYLFFFTRYISLYNSIMKLVFIGTSIAIVWYMRYHKVVKQTYNKDEDTFKHYFLILPSFVLALLIPHAFNSVEILWTFSIYLEAVAILPQLVLLQRSRNIDNLTGNYVFLLGAYRA 546
            MN+FRL GDMTHL S++VLLLKI T KSCAG+SLKTQELY LVF++RYL  FT +ISLYN+ MKLVF+G+S++IVWYMR+HK+V+++Y+KD+DTF+H FL+LP  +LAL+I   F   E++WTFSIYLEAVAILPQLVLLQR+RNIDNLTG Y+FLLGAYR+
Sbjct:    1 MNIFRLAGDMTHLASVLVLLLKIHTIKSCAGVSLKTQELYALVFVTRYLDIFTDFISLYNTTMKLVFLGSSLSIVWYMRHHKIVRRSYDKDQDTFRHLFLVLPCLLLALVINEKFTFKEVMWTFSIYLEAVAILPQLVLLQRTRNIDNLTGQYIFLLGAYRS 162          

HSP 2 Score: 66.2402 bits (160), Expect = 1.105e-77
Identity = 27/45 (60.00%), Postives = 33/45 (73.33%), Query Frame = 2
Query:  548 YNILNWAYRFYVEDHKVRWKPWLFGAGLQTALYADFFYYYFKSWK 682
            + ILNW YR++ E H V W  W+ G  +QT LYADFFYYYF+SWK
Sbjct:  163 FYILNWVYRYFTEPHFVHWITWIAGL-IQTLLYADFFYYYFQSWK 206          
BLAST of EY665769 vs. ExPASy Swiss-Prot
Match: ERD2_ARATH (ER lumen protein retaining receptor OS=Arabidopsis thaliana GN=ERD2 PE=2 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 1.567e-70
Identity = 109/163 (66.87%), Postives = 133/163 (81.60%), Query Frame = 1
Query:   61 MNLFRLVGDMTHLLSIVVLLLKIRTTKSCAGISLKTQELYVLVFLSRYLFFFTRYISLYNSIMKLVFIGTSIAIVWYMRYHKVVKQTYNKDEDTFKHYFLILPSFVLALLIPHAFNSVEILWTFSIYLEAVAILPQLVLLQRSRNIDNLTGNYVFLLGAYRAL 549
            MN+FR  GDM+HL+S+++LLLKI  TKSCAGISLKTQELY LVFL+RYL  FT Y+SLYNSIMK+VFI +S+AIVW MR H +V+++Y+KD DTF+H +++L  FVL L++   F   E+ W FSIYLEAVAILPQLVLLQRS N+DNLTG YV  LGAYR L
Sbjct:    1 MNIFRFAGDMSHLISVLILLLKIYATKSCAGISLKTQELYALVFLTRYLDLFTDYVSLYNSIMKIVFIASSLAIVWCMRRHPLVRRSYDKDLDTFRHQYVVLACFVLGLILNEKFTVQEVFWAFSIYLEAVAILPQLVLLQRSGNVDNLTGQYVVFLGAYRGL 163          

HSP 2 Score: 61.6178 bits (148), Expect = 1.567e-70
Identity = 29/53 (54.72%), Postives = 35/53 (66.04%), Query Frame = 2
Query:  524 FFSVLTELYNILNWAYRFYVEDHKVRWKPWLFGAGLQTALYADFFYYYFKSWK 682
            F      LY I+NW YR++ EDH  RW   + G  +QTALYADFFYYY+ SWK
Sbjct:  156 FLGAYRGLY-IINWIYRYFTEDHFTRWIACVSGL-VQTALYADFFYYYYISWK 206          
BLAST of EY665769 vs. ExPASy Swiss-Prot
Match: ERD2_DROME (ER lumen protein retaining receptor OS=Drosophila melanogaster GN=KdelR PE=2 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 2.069e-48
Identity = 87/163 (53.37%), Postives = 126/163 (77.30%), Query Frame = 1
Query:   61 MNLFRLVGDMTHLLSIVVLLLKIRTTKSCAGISLKTQELYVLVFLSRYLFFFTRYISLYNSIMKLVFIGTSIAIVWYMRYHKVVKQTYNKDEDTFKHYFLILPSFVLALLIPHAFNSVEILWTFSIYLEAVAILPQLVLLQRSRNIDNLTGNYVFLLGAYRAL 549
            MN+FR  GD++H+ +I++LLLKI  T+SCAGIS K+Q L+ +V+L+RYL  FT Y+SLYNS+MK++F+ TS A V Y+ Y K  K TY+ + D+F+  FL++P  +L+L+I H F  +E+LWTFSIYLE+VAILPQL L+ R+   +++T +Y+F LG+YRAL
Sbjct:    1 MNIFRFAGDLSHVFAIIILLLKIWKTRSCAGISGKSQILFAVVYLTRYLDLFTTYVSLYNSVMKVLFLATSGATV-YLMYVK-FKATYDHNHDSFRIEFLLVPCALLSLVINHEFTVMEVLWTFSIYLESVAILPQLFLVSRTGEAESITSHYLFALGSYRAL 161          

HSP 2 Score: 38.5058 bits (88), Expect = 2.069e-48
Identity = 18/38 (47.37%), Postives = 22/38 (57.89%), Query Frame = 2
Query:  554 ILNWAYRFYVEDHKVRWKPWLFGAGLQTALYADFFYYY 667
            +LNW YR+ VE H       +F   +QT LY DFFY Y
Sbjct:  163 LLNWVYRYMVESHYDLIA--IFAGVVQTVLYCDFFYLY 198          
BLAST of EY665769 vs. ExPASy Swiss-Prot
Match: ERD22_CAEEL (Putative ER lumen protein retaining receptor C28H8.4 OS=Caenorhabditis elegans GN=C28H8.4 PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 3.515e-48
Identity = 86/163 (52.76%), Postives = 121/163 (74.23%), Query Frame = 1
Query:   61 MNLFRLVGDMTHLLSIVVLLLKIRTTKSCAGISLKTQELYVLVFLSRYLFFFTRYISLYNSIMKLVFIGTSIAIVWYMRYHKVVKQTYNKDEDTFKHYFLILPSFVLALLIPHAFNSVEILWTFSIYLEAVAILPQLVLLQRSRNIDNLTGNYVFLLGAYRAL 549
            MN+FR+  DM+HLL+I++LLLKI  ++SC+GIS ++Q L+ LVF +RYL  F+ YISLYN+ MK+ F+  + A V+ M +    + TY ++ DTF+   LI+P+ +LALLI H F   E+LWTFSIYLEAVAILPQL LLQ + + + +T +Y+F LG+YRAL
Sbjct:    1 MNIFRISADMSHLLAIIILLLKIWKSRSCSGISARSQILFALVFTARYLDLFSTYISLYNTTMKITFLAATYATVYLMFFK--FRSTYMRESDTFRVELLIVPAAILALLINHDFAPFELLWTFSIYLEAVAILPQLFLLQSTGSAEVITAHYLFALGSYRAL 161          

HSP 2 Score: 42.3578 bits (98), Expect = 3.515e-48
Identity = 21/39 (53.85%), Postives = 26/39 (66.67%), Query Frame = 2
Query:  554 ILNWAYRFYVEDHKVRWKPWLFGAGL-QTALYADFFYYY 667
            I NW YR+Y ED+   + P +  AG+ QT LYADFFY Y
Sbjct:  163 IFNWIYRYYTEDY---FDPIVVVAGIVQTVLYADFFYLY 198          
BLAST of EY665769 vs. ExPASy Swiss-Prot
Match: ERD2_CAEBR (ER lumen protein retaining receptor OS=Caenorhabditis briggsae GN=erd-2 PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 7.031e-46
Identity = 80/163 (49.08%), Postives = 119/163 (73.01%), Query Frame = 1
Query:   61 MNLFRLVGDMTHLLSIVVLLLKIRTTKSCAGISLKTQELYVLVFLSRYLFFFTRYISLYNSIMKLVFIGTSIAIVWYMRYHKVVKQTYNKDEDTFKHYFLILPSFVLALLIPHAFNSVEILWTFSIYLEAVAILPQLVLLQRSRNIDNLTGNYVFLLGAYRAL 549
            MN+FR+  D+ H ++IV+LLLKI  ++SC GIS ++Q L+ + F +RYL  FT + SLYN++MK++F+  SI  V+ M      K TY+++ DTF+  FL++PS +LAL+I H F  +E++WTFSIYLEAVAI+PQL +L R+ N + +T +Y+F LG+YR L
Sbjct:    1 MNIFRITADLAHAVAIVILLLKIWKSRSCEGISGRSQILFAVTFFTRYLDLFTSFYSLYNTVMKVLFLAGSIGTVYLMWVK--FKATYDRNNDTFRIEFLVIPSIILALIINHEFMFMEVMWTFSIYLEAVAIMPQLFMLSRTGNAETITAHYLFALGSYRFL 161          

HSP 2 Score: 38.5058 bits (88), Expect = 7.031e-46
Identity = 20/39 (51.28%), Postives = 23/39 (58.97%), Query Frame = 2
Query:  554 ILNWAYRFYVEDHKVRWKPWLFGAGL-QTALYADFFYYY 667
            I NW YR+Y E     + P    AG+ QT LYADFFY Y
Sbjct:  163 IFNWVYRYYTESF---FDPIAVVAGIVQTVLYADFFYLY 198          
BLAST of EY665769 vs. ExPASy Swiss-Prot
Match: ERD21_RAT (ER lumen protein retaining receptor 1 OS=Rattus norvegicus GN=Kdelr1 PE=2 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.556e-45
Identity = 89/163 (54.60%), Postives = 121/163 (74.23%), Query Frame = 1
Query:   61 MNLFRLVGDMTHLLSIVVLLLKIRTTKSCAGISLKTQELYVLVFLSRYLFFFTRYISLYNSIMKLVFIGTSIAIVWYMRYHKVVKQTYNKDEDTFKHYFLILPSFVLALLIPHAFNSVEILWTFSIYLEAVAILPQLVLLQRSRNIDNLTGNYVFLLGAYRAL 549
            MNLFR +GD++HLL+I++LLLKI  ++SCAGIS K+Q L+ +VF +RYL  FT YISLYN+ MK+V+I  S   VW M Y K  K TY+ + DTF+  FL++P+ VLA L+ H F  +EILWTFSIYLE+VAILPQL ++ ++   + +T +Y+F LG YR L
Sbjct:    1 MNLFRFLGDLSHLLAIILLLLKIWKSRSCAGISGKSQVLFAVVFTARYLDLFTNYISLYNTCMKVVYIACSFTTVW-MIYSK-FKATYDGNHDTFRVEFLVVPTAVLAFLVNHDFTPLEILWTFSIYLESVAILPQLFMVSKTGEAETITSHYLFALGVYRTL 161          

HSP 2 Score: 28.4906 bits (62), Expect = 1.556e-45
Identity = 16/39 (41.03%), Postives = 21/39 (53.85%), Query Frame = 2
Query:  554 ILNWAYRFYVEDHKVRWKPWLFGAGL-QTALYADFFYYY 667
            + NW +R++ E     +      AGL QT LY DFFY Y
Sbjct:  163 LFNWIWRYHFEGF---FDLIAIVAGLVQTVLYCDFFYLY 198          
BLAST of EY665769 vs. ExPASy Swiss-Prot
Match: ERD21_BOVIN (ER lumen protein retaining receptor 1 OS=Bos taurus GN=KDELR1 PE=2 SV=2)

HSP 1 Score: 176.407 bits (446), Expect = 1.556e-45
Identity = 88/163 (53.99%), Postives = 121/163 (74.23%), Query Frame = 1
Query:   61 MNLFRLVGDMTHLLSIVVLLLKIRTTKSCAGISLKTQELYVLVFLSRYLFFFTRYISLYNSIMKLVFIGTSIAIVWYMRYHKVVKQTYNKDEDTFKHYFLILPSFVLALLIPHAFNSVEILWTFSIYLEAVAILPQLVLLQRSRNIDNLTGNYVFLLGAYRAL 549
            MNLFR +GD++HLL+I++LLLKI  ++SCAGIS K+Q L+ +VF +RYL  FT YISLYN+ MK+V+I  S   VW M Y K  K TY+ + DTF+  FL++P+ +LA L+ H F  +EILWTFSIYLE+VAILPQL ++ ++   + +T +Y+F LG YR L
Sbjct:    1 MNLFRFLGDLSHLLAIILLLLKIWKSRSCAGISGKSQVLFAVVFTARYLDLFTNYISLYNTCMKVVYIACSFTTVW-MIYSK-FKATYDGNHDTFRVEFLVIPTAILAFLVNHDFTPLEILWTFSIYLESVAILPQLFMVSKTGEAETITSHYLFALGVYRTL 161          

HSP 2 Score: 28.4906 bits (62), Expect = 1.556e-45
Identity = 16/39 (41.03%), Postives = 21/39 (53.85%), Query Frame = 2
Query:  554 ILNWAYRFYVEDHKVRWKPWLFGAGL-QTALYADFFYYY 667
            + NW +R++ E     +      AGL QT LY DFFY Y
Sbjct:  163 LFNWIWRYHFEGF---FDLIAIVAGLVQTVLYCDFFYLY 198          
BLAST of EY665769 vs. ExPASy Swiss-Prot
Match: ERD21_MOUSE (ER lumen protein retaining receptor 1 OS=Mus musculus GN=Kdelr1 PE=2 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 2.028e-45
Identity = 88/163 (53.99%), Postives = 121/163 (74.23%), Query Frame = 1
Query:   61 MNLFRLVGDMTHLLSIVVLLLKIRTTKSCAGISLKTQELYVLVFLSRYLFFFTRYISLYNSIMKLVFIGTSIAIVWYMRYHKVVKQTYNKDEDTFKHYFLILPSFVLALLIPHAFNSVEILWTFSIYLEAVAILPQLVLLQRSRNIDNLTGNYVFLLGAYRAL 549
            MNLFR +GD++HLL+I++LLLKI  ++SCAGIS K+Q L+ +VF +RYL  FT YISLYN+ MK+V+I  S   VW M Y K  K TY+ + DTF+  FL++P+ +LA L+ H F  +EILWTFSIYLE+VAILPQL ++ ++   + +T +Y+F LG YR L
Sbjct:    1 MNLFRFLGDLSHLLAIILLLLKIWKSRSCAGISGKSQVLFAVVFTARYLDLFTNYISLYNTCMKVVYIACSFTTVW-MIYSK-FKATYDGNHDTFRVEFLVVPTAILAFLVNHDFTPLEILWTFSIYLESVAILPQLFMVSKTGEAETITSHYLFALGVYRTL 161          

HSP 2 Score: 28.4906 bits (62), Expect = 2.028e-45
Identity = 16/39 (41.03%), Postives = 21/39 (53.85%), Query Frame = 2
Query:  554 ILNWAYRFYVEDHKVRWKPWLFGAGL-QTALYADFFYYY 667
            + NW +R++ E     +      AGL QT LY DFFY Y
Sbjct:  163 LFNWIWRYHFEGF---FDLIAIVAGLVQTVLYCDFFYLY 198          
BLAST of EY665769 vs. ExPASy Swiss-Prot
Match: ERD2_CAEEL (ER lumen protein retaining receptor OS=Caenorhabditis elegans GN=erd-2 PE=2 SV=2)

HSP 1 Score: 164.466 bits (415), Expect = 2.643e-45
Identity = 82/163 (50.31%), Postives = 118/163 (72.39%), Query Frame = 1
Query:   61 MNLFRLVGDMTHLLSIVVLLLKIRTTKSCAGISLKTQELYVLVFLSRYLFFFTRYISLYNSIMKLVFIGTSIAIVWYMRYHKVVKQTYNKDEDTFKHYFLILPSFVLALLIPHAFNSVEILWTFSIYLEAVAILPQLVLLQRSRNIDNLTGNYVFLLGAYRAL 549
            MNLFR   D+ H ++IVVLLLKI  ++SC GIS ++Q L+ LVF++RYL  FT + S YN+ MK+ ++  S   V Y+ + K  K TY+++ D+F+  FL++PS +LALLI H F  +E++WTFSIYLEAVAI+PQL +L R+ N + +T +Y+F LG+YR L
Sbjct:    1 MNLFRFTADVAHAIAIVVLLLKIWKSRSCEGISGRSQLLFALVFVTRYLDLFTNFFSFYNTAMKIFYLVASFGTV-YLMWAKF-KATYDRNNDSFRIEFLVIPSMILALLINHEFIFMEVMWTFSIYLEAVAIMPQLFMLSRTGNAETITAHYLFALGSYRFL 161          

HSP 2 Score: 39.6614 bits (91), Expect = 2.643e-45
Identity = 21/39 (53.85%), Postives = 24/39 (61.54%), Query Frame = 2
Query:  554 ILNWAYRFYVEDHKVRWKPWLFGAGL-QTALYADFFYYY 667
            ILNW YR+Y E     + P    AG+ QT LYADFFY Y
Sbjct:  163 ILNWVYRYYTESF---FDPISVVAGIVQTVLYADFFYLY 198          
BLAST of EY665769 vs. ExPASy Swiss-Prot
Match: ERD21_HUMAN (ER lumen protein retaining receptor 1 OS=Homo sapiens GN=KDELR1 PE=1 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 3.445e-45
Identity = 85/163 (52.15%), Postives = 120/163 (73.62%), Query Frame = 1
Query:   61 MNLFRLVGDMTHLLSIVVLLLKIRTTKSCAGISLKTQELYVLVFLSRYLFFFTRYISLYNSIMKLVFIGTSIAIVWYMRYHKVVKQTYNKDEDTFKHYFLILPSFVLALLIPHAFNSVEILWTFSIYLEAVAILPQLVLLQRSRNIDNLTGNYVFLLGAYRAL 549
            MNLFR +GD++HLL+I++LLLKI  ++SCAGIS K+Q L+ +VF +RYL  FT YISLYN+ MK+V+I  S   VW +  +   K TY+ + DTF+  FL++P+ +LA L+ H F  +EILWTFSIYLE+VAILPQL ++ ++   + +T +Y+F LG YR L
Sbjct:    1 MNLFRFLGDLSHLLAIILLLLKIWKSRSCAGISGKSQVLFAVVFTARYLDLFTNYISLYNTCMKVVYIACSFTTVWLI--YSKFKATYDGNHDTFRVEFLVVPTAILAFLVNHDFTPLEILWTFSIYLESVAILPQLFMVSKTGEAETITSHYLFALGVYRTL 161          

HSP 2 Score: 28.4906 bits (62), Expect = 3.445e-45
Identity = 16/39 (41.03%), Postives = 21/39 (53.85%), Query Frame = 2
Query:  554 ILNWAYRFYVEDHKVRWKPWLFGAGL-QTALYADFFYYY 667
            + NW +R++ E     +      AGL QT LY DFFY Y
Sbjct:  163 LFNWIWRYHFEGF---FDLIAIVAGLVQTVLYCDFFYLY 198          
The following BLAST results are available for this feature:
BLAST of EY665769 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
ERD2_PETHY1.105e-7770.99ER lumen protein retaining receptor OS=Petunia hyb... [more]
ERD2_ARATH1.567e-7066.87ER lumen protein retaining receptor OS=Arabidopsis... [more]
ERD2_DROME2.069e-4853.37ER lumen protein retaining receptor OS=Drosophila ... [more]
ERD22_CAEEL3.515e-4852.76Putative ER lumen protein retaining receptor C28H8... [more]
ERD2_CAEBR7.031e-4649.08ER lumen protein retaining receptor OS=Caenorhabdi... [more]
ERD21_RAT1.556e-4554.60ER lumen protein retaining receptor 1 OS=Rattus no... [more]
ERD21_BOVIN1.556e-4553.99ER lumen protein retaining receptor 1 OS=Bos tauru... [more]
ERD21_MOUSE2.028e-4553.99ER lumen protein retaining receptor 1 OS=Mus muscu... [more]
ERD2_CAEEL2.643e-4550.31ER lumen protein retaining receptor OS=Caenorhabdi... [more]
ERD21_HUMAN3.445e-4552.15ER lumen protein retaining receptor 1 OS=Homo sapi... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-095-D04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665769 ID=EY665769; Name=EY665769; organism=Citrus sinensis; type=EST; length=851bp
GAAAAAAAGAAGAGCTTAAAAGAAAAGAGGGAAGTGAAAGAAAAATTACA
ACAAAGAATCATGAACTTGTTTAGATTGGTCGGGGACATGACCCACCTCC
TTAGTATAGTGGTCCTTCTACTCAAAATTCGTACTACGAAATCATGTGCA
GGAATTTCACTCAAGACTCAAGAACTGTATGTCTTAGTGTTTCTTTCTCG
GTATCTCTTCTTCTTCACGAGATACATCTCTCTCTACAACTCCATAATGA
AGCTAGTCTTTATTGGAACTTCAATAGCTATTGTTTGGTACATGCGATAC
CACAAAGTTGTGAAGCAGACCTATAACAAGGACGAAGACACATTCAAACA
CTATTTTCTGATTCTCCCGAGTTTTGTCTTGGCCCTTCTGATTCCCCATG
CCTTTAATTCGGTTGAGATTCTGTGGACATTTTCAATTTATCTTGAAGCA
GTGGCAATCTTACCACAGCTGGTATTGCTGCAACGGTCAAGGAACATTGA
CAACTTAACTGGAAATTATGTCTTTCTTCTCGGTGCTTACCGAGCTTTAT
AATATCCTCAACTGGGCTTACCGTTTCTATGTGGAGGATCACAAAGTCCG
CTGGAAACCCTGGCTTTTCGGGGCTGGGCTCCAGACTGCTCTTTATGCTG
ACTTTTTTTATTACTACTTTAAGAGCTGGAAAAAACCGGGAATTTCTCAA
GCTGGCTGGCTGGAATGGGAGTTTTCTTGTTTCAAAGGTTTACGGCATTT
TTAAAAAAACAAAAAAATTTATATTTTTCTAATTTGGGTTTTTAATAACC
GGAAGGTTGTGCTGGCGAGGAAGGGCCTCTAAATTTTTTTGATAAGGGGG
G
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