EL492565

Overview
NameEL492565
Unique NameEL492565
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length537
Libraries
Library NameType
Citrus sinensis flesh cDNA-AFLP Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2115 contig Csv1_Contig2115:234..770. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EL492565 vs. ExPASy Swiss-Prot
Match: GSTX4_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 255.758 bits (652), Expect = 9.789e-68
Identity = 116/160 (72.50%), Postives = 135/160 (84.38%), Query Frame = 3
Query:   12 GKSVCESSIIVQYIDEVWKDKAP-LLPYDPYQRAQARFWVDFIDKKMYDTSRKTWATKGEEQEAAKKEFIEVLKTLEGELGDKPFFGGDNFGYVDLCLIPYYCWFYSYETFGKFSVEAECPKFIAWVKRCLQRETVAKALPDEKKVFEFVSVLREKIRVE 488
            GK +CES I V+YI+EVWKDKAP LLP DPY RAQARFW D+IDKK+YD  RK W TKGEEQEAAKK+FIE LK LEG LGDKP+FGG++FG+VD+ LI YY WFY+YETFG FS EAECPKF+AW KRC+QRE+VAK+LPD+ KV EFV VLR+K  +E
Sbjct:   62 GKPICESIIAVEYIEEVWKDKAPNLLPSDPYDRAQARFWADYIDKKLYDFGRKLWTTKGEEQEAAKKDFIECLKVLEGALGDKPYFGGESFGFVDIALIGYYSWFYAYETFGNFSTEAECPKFVAWAKRCMQRESVAKSLPDQPKVLEFVKVLRQKFGLE 221          
BLAST of EL492565 vs. ExPASy Swiss-Prot
Match: GSTXC_TOBAC (Probable glutathione S-transferase parC OS=Nicotiana tabacum GN=PARC PE=2 SV=1)

HSP 1 Score: 254.603 bits (649), Expect = 2.181e-67
Identity = 115/160 (71.88%), Postives = 136/160 (85.00%), Query Frame = 3
Query:   12 GKSVCESSIIVQYIDEVWKDKAP-LLPYDPYQRAQARFWVDFIDKKMYDTSRKTWATKGEEQEAAKKEFIEVLKTLEGELGDKPFFGGDNFGYVDLCLIPYYCWFYSYETFGKFSVEAECPKFIAWVKRCLQRETVAKALPDEKKVFEFVSVLREKIRVE 488
            GK +CES I V+YI+EVWKDKAP LLP DPY RAQARFW D+IDKK+YD  RK WATKGEEQEAAKK+FIE LK LEG LGD+P+FGG++FG+VD+ LI +Y WFY+YETFG FS EAECPKF+AW KRC+QRE+VAK+LPD+ KV EFV VLR+K  +E
Sbjct:   62 GKPICESIIAVEYIEEVWKDKAPSLLPSDPYDRAQARFWADYIDKKLYDFGRKLWATKGEEQEAAKKDFIECLKVLEGALGDRPYFGGESFGFVDIALIGFYSWFYAYETFGNFSTEAECPKFVAWAKRCMQRESVAKSLPDQPKVLEFVKVLRQKFGLE 221          
BLAST of EL492565 vs. ExPASy Swiss-Prot
Match: GSTX3_SOYBN (Glutathione S-transferase 3 OS=Glycine max GN=GST3 PE=1 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 3.156e-58
Identity = 97/156 (62.18%), Postives = 123/156 (78.85%), Query Frame = 3
Query:   12 GKSVCESSIIVQYIDEVWKDKAPLLPYDPYQRAQARFWVDFIDKKMYDTSRKTWATKGEEQEAAKKEFIEVLKTLEGELGDKPFFGGDNFGYVDLCLIPYYCWFYSYETFGKFSVEAECPKFIAWVKRCLQRETVAKALPDEKKVFEFVSVLREKI 479
            GK +CES+IIVQYIDEVW DK+PL+P DPY+R+QARFWVD+IDKK+YDT +K W +KGEE E  KKE I + K LE  L DKPF+G D FG+VDLCLI +  WFY+YET+G F +E ECPK +AWVKRC++RETV+  LPD KKV+  +  L++ +
Sbjct:   61 GKPICESAIIVQYIDEVWNDKSPLMPSDPYKRSQARFWVDYIDKKIYDTWKKMWLSKGEEHEEGKKELISIFKQLEETLTDKPFYGDDTFGFVDLCLITFSSWFYTYETYGNFKMEEECPKLMAWVKRCMERETVSNTLPDAKKVYGLIVELQKTL 216          
BLAST of EL492565 vs. ExPASy Swiss-Prot
Match: GSTXA_TOBAC (Probable glutathione S-transferase parA OS=Nicotiana tabacum GN=PARA PE=2 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 5.384e-58
Identity = 95/155 (61.29%), Postives = 124/155 (80.00%), Query Frame = 3
Query:   15 KSVCESSIIVQYIDEVWKDKAPLLPYDPYQRAQARFWVDFIDKKMYDTSRKTWATKGEEQEAAKKEFIEVLKTLEGELGDKPFFGGDNFGYVDLCLIPYYCWFYSYETFGKFSVEAECPKFIAWVKRCLQRETVAKALPDEKKVFEFVSVLREKI 479
            K++CES  I++YIDEVW DK PLLP DPY+R+QARFW D+IDKK+Y T R+ W+ KGE+QE AKKEFIE+LKTLEGELG+K +FGGDN G+VD+ L+P+  WFYSYET   FS+EAECPK + W K C++ E+V+K+LP   K++ FV  L+ K+
Sbjct:   63 KAICESLNILEYIDEVWHDKCPLLPSDPYERSQARFWADYIDKKIYSTGRRVWSGKGEDQEEAKKEFIEILKTLEGELGNKTYFGGDNLGFVDVALVPFTSWFYSYETCANFSIEAECPKLVVWAKTCMESESVSKSLPHPHKIYGFVLELKHKL 217          
BLAST of EL492565 vs. ExPASy Swiss-Prot
Match: GSTX1_NICPL (Probable glutathione S-transferase MSR-1 OS=Nicotiana plumbaginifolia GN=MSR-1 PE=2 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 2.765e-54
Identity = 91/156 (58.33%), Postives = 121/156 (77.56%), Query Frame = 3
Query:   12 GKSVCESSIIVQYIDEVWKDKAPLLPYDPYQRAQARFWVDFIDKKMYDTSRKTWATKGEEQEAAKKEFIEVLKTLEGELGDKPFFGGDNFGYVDLCLIPYYCWFYSYETFGKFSVEAECPKFIAWVKRCLQRETVAKALPDEKKVFEFVSVLREKI 479
            GK +CES  I++YIDEVW +K PLLP DPYQR+QARFW ++ID K+Y T R+ W+ KGE+QE AKKEFIE+ KTLEGELG+K +FGGDN G+VD+ L+P+  WFYSYET   FS+EAEC K + W + C++ E V+K+LP   K+++FV  L+ K+
Sbjct:   62 GKPICESLNILEYIDEVWHEKCPLLPSDPYQRSQARFWANYIDNKIYSTGRRVWSGKGEDQEEAKKEFIEIFKTLEGELGNKTYFGGDNLGFVDVALVPFTSWFYSYETCANFSIEAECRKLVVW-QNCMENERVSKSLPHPHKIYDFVLELKHKL 216          
BLAST of EL492565 vs. ExPASy Swiss-Prot
Match: GSTU1_ORYSJ (Probable glutathione S-transferase GSTU1 OS=Oryza sativa subsp. japonica GN=GSTU1 PE=1 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 7.311e-39
Identity = 78/169 (46.15%), Postives = 107/169 (63.31%), Query Frame = 3
Query:   12 GKSVCESSIIVQYIDEVWKDKAPLLPYD-------PYQRAQARFWVDFIDKKMYDTSRKTWATKGEEQEAAKKEFIEVLKTLEGELGDKPFFGGDN---FGYVDLCLIPYYCWFYSYETFGKFSVEAECPKFIAWVKRCLQRETVAKALPDEKKVFEFVSVLREKIRVE 488
            G+ V ES +I+QY+D+ +     LLP          Y RA ARFW D++D+K+YD   + W  KGE Q AA +E  E+L+TLE ELGD+ FFGG      G+VD+ L+P+  WFYSYE  G FSVE   P+  AW +RC + ++V K LP  +KV++FV VL++K  VE
Sbjct:   63 GRPVSESLVILQYLDDAFPGTPHLLPPANSGDADAAYARATARFWADYVDRKLYDCGSRLWRLKGEPQAAAGREMAEILRTLEAELGDREFFGGGGGGRLGFVDVALVPFTAWFYSYERCGGFSVEEVAPRLAAWARRCGRIDSVVKHLPSPEKVYDFVGVLKKKYGVE 231          
BLAST of EL492565 vs. ExPASy Swiss-Prot
Match: GSTU1_ORYSI (Probable glutathione S-transferase GSTU1 OS=Oryza sativa subsp. indica GN=GSTU1 PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 1.629e-38
Identity = 79/169 (46.75%), Postives = 109/169 (64.50%), Query Frame = 3
Query:   12 GKSVCESSIIVQYIDEVWKDKAPLL-PYDP------YQRAQARFWVDFIDKKMYDTSRKTWATKGEEQEAAKKEFIEVLKTLEGELGDKPFFGGDN---FGYVDLCLIPYYCWFYSYETFGKFSVEAECPKFIAWVKRCLQRETVAKALPDEKKVFEFVSVLREKIRVE 488
            G+ V ES +I+QY+D+ +     LL P +       Y RA ARFW D++D+K+YD   + W  KGE Q AA +E  E+L+TLE ELGD+ FFGG      G+VD+ L+P+  WFYSYE  G FSVE   P+  AW +RC + ++VAK LP  +KV++FV VL++K  VE
Sbjct:   63 GRPVSESLVILQYLDDAFPGTPHLLSPANSGDADAAYARATARFWADYVDRKLYDCGSRLWRLKGEPQAAAGREMAEILRTLEAELGDREFFGGGGGGRLGFVDVALVPFTAWFYSYERCGGFSVEEVAPRLAAWARRCGRIDSVAKHLPSPEKVYDFVGVLKKKYGVE 231          
BLAST of EL492565 vs. ExPASy Swiss-Prot
Match: GSTX2_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 8.121e-22
Identity = 60/150 (40.00%), Postives = 84/150 (56.00%), Query Frame = 3
Query:   12 GKSVCESSIIVQYIDEVWKDKAPLLPYDPYQRAQARFWVDFIDKKMYDTSRKTWATKGEEQEAAKKEFIEVLKTLEGELGDKPFFGGDNFGYVDLCLIPYYCWFYSYET-FGKFSVEAE-CPKFIAWVKRCLQRETVAKALPDEKKVFEF 455
            GK + ES II++YIDE ++  + +LP DPY RA ARFW  F+D K+      T+  KGEEQE  K+E  E+LK L+ EL DK FF GD FG+ D+       W   +E  +G   V++E  P F  W    +    V ++LP   ++  F
Sbjct:   60 GKPIVESMIILEYIDETFEGPS-ILPKDPYDRALARFWAKFLDDKVAAVVN-TFFRKGEEQEKGKEEVYEMLKVLDNELKDKKFFAGDKFGFADIAANLVGFWLGVFEEGYGDVLVKSEKFPNFSKWRDEYINCSQVNESLPPRDELLAF 207          
BLAST of EL492565 vs. ExPASy Swiss-Prot
Match: GSTX1_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 4.030e-21
Identity = 59/151 (39.07%), Postives = 86/151 (56.95%), Query Frame = 3
Query:   12 GKSVCESSIIVQYIDEVWKDKAPLLPYDPYQRAQARFWVDFIDKKMYDTSRKTWATKGEEQEAAKKEFIEVLKTLEGELGDKPFFGGDNFGYVDLC--LIPYYCWFYSYETFGKFSVEAE-CPKFIAWVKRCLQRETVAKALPDEKKVFEF 455
            GK + ES +I++YIDE ++  + +LP DPY RA ARFW  F+D K+     KT+  KGEEQE  K+E  E+LK L+ EL DK FF GD FG+ D+   L+ ++   +  E  G   V +E  P F  W    +    + ++LP   ++  F
Sbjct:   60 GKRIVESMVILEYIDETFEGPS-ILPKDPYDRALARFWAKFLDDKV-PAVVKTFLRKGEEQEKDKEEVCEMLKVLDNELKDKKFFVGDKFGFADIAANLVAFWLGVFE-EASGVVLVTSEKFPNFCKWRGEYINCSQIKESLPPRDELLAF 207          
BLAST of EL492565 vs. ExPASy Swiss-Prot
Match: GSTU6_ORYSJ (Probable glutathione S-transferase GSTU6 OS=Oryza sativa subsp. japonica GN=GSTU6 PE=2 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 6.874e-21
Identity = 64/169 (37.87%), Postives = 90/169 (53.25%), Query Frame = 3
Query:   12 GKSVCESSIIVQYIDEVWKDKA----PLLPYDPYQRAQARFWVDFIDKKMYDTSRKTW------ATKGEEQEAAKKEFIEVLKTLEGELGD----KPFFGGDNFGYVDLCLIPYYCWFYSYE-TFGKFSVE-AECPKFIAWVKRCLQRETVAKALPDE-KKVFEFVSVL 467
            G+ V ES +IVQYIDEVW   A     ++P DPY+RA ARFW  ++D K+    R  W      +   EE+ AA  + +  L+TLEG  G+    KPFFGGD  G+VD+ L  Y  WF + +   G+  ++ A  P   AW +R    +     +PD+  K+ EF   L
Sbjct:   63 GRPVNESQVIVQYIDEVWPGGAGGRPSVMPSDPYERAVARFWAAYVDDKV----RPAWLAILFGSKTEEERAAAVAQAVAALETLEGAFGECSKGKPFFGGDGVGFVDVVLGGYLGWFTAIDKLIGRRLIDPARTPALAAWEERFRATDAAKGVVPDDADKLLEFRQTL 227          
The following BLAST results are available for this feature:
BLAST of EL492565 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
GSTX4_TOBAC9.789e-6872.50Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTXC_TOBAC2.181e-6771.88Probable glutathione S-transferase parC OS=Nicotia... [more]
GSTX3_SOYBN3.156e-5862.18Glutathione S-transferase 3 OS=Glycine max GN=GST3... [more]
GSTXA_TOBAC5.384e-5861.29Probable glutathione S-transferase parA OS=Nicotia... [more]
GSTX1_NICPL2.765e-5458.33Probable glutathione S-transferase MSR-1 OS=Nicoti... [more]
GSTU1_ORYSJ7.311e-3946.15Probable glutathione S-transferase GSTU1 OS=Oryza ... [more]
GSTU1_ORYSI1.629e-3846.75Probable glutathione S-transferase GSTU1 OS=Oryza ... [more]
GSTX2_TOBAC8.121e-2240.00Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX1_TOBAC4.030e-2139.07Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTU6_ORYSJ6.874e-2137.87Probable glutathione S-transferase GSTU6 OS=Oryza ... [more]

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Properties
Property NameValue
Genbank descriptionC3470 Citrus sinensis flesh cDNA-AFLP Library Citrus sinensis cDNA clone ClC3470, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EL492565 ID=EL492565; Name=EL492565; organism=Citrus sinensis; type=EST; length=537bp
GTTTTTCCTATGGCAAATCGGTCTGTGAGTCATCCATCATTGTTCAGTAC
ATTGATGAAGTCTGGAAGGACAAGGCTCCATTGCTTCCCTACGATCCTTA
CCAAAGAGCTCAAGCGAGGTTCTGGGTCGATTTTATTGACAAGAAGATGT
ACGATACTTCGAGGAAGACATGGGCCACAAAGGGAGAAGAGCAGGAGGCA
GCAAAGAAGGAGTTCATCGAAGTTCTGAAGACCTTGGAAGGGGAGCTTGG
AGACAAGCCTTTTTTCGGAGGAGACAACTTTGGGTATGTGGATTTGTGTT
TGATCCCGTACTATTGTTGGTTTTATTCGTATGAGACATTTGGAAAGTTC
AGCGTTGAGGCTGAGTGCCCCAAATTCATTGCTTGGGTGAAGAGATGCTT
GCAGAGAGAGACTGTTGCCAAGGCACTTCCTGATGAGAAAAAAGTGTTTG
AATTTGTTTCAGTGTTGAGGGAAAAAATTAGAGTTGAGTAAAGGGATATA
GCTAGACGATGAGAGAAGTCAAAGCAGCACAATCGTG
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