FC871921
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC871921 vs. ExPASy Swiss-Prot
Match: PSDE_ARATH (26S proteasome non-ATPase regulatory subunit 14 OS=Arabidopsis thaliana GN=RPN11 PE=2 SV=1) HSP 1 Score: 381.719 bits (979), Expect = 2.642e-105 Identity = 190/216 (87.96%), Postives = 193/216 (89.35%), Query Frame = 3 Query: 3 NMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSNLGHLNKPSIQAFIHGLNRHYYSIAINYRXXXXXXXXXXXXXXXXWTDGLTLHRFDCHSKTNEQTVQEMLNLAVKYNKAVQEEDELPPEKLAIANVGRQDAKKHLEEHVSNLMSSNIVQTLGTMLDTVIF 650 NMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFR INPQT+MLGQEPRQTTSNLGHLNKPSIQA IHGLNRHYYSIAINYR WTDGLTL RFD HSKTNEQTVQEML+LA KYNKAVQEEDEL PEKLAI NVGRQDAKKHLEEHVSNLMSSNIVQTLGTMLDTV+F Sbjct: 93 NMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRSINPQTIMLGQEPRQTTSNLGHLNKPSIQALIHGLNRHYYSIAINYRKNELEEKMLLNLHKKKWTDGLTLRRFDTHSKTNEQTVQEMLSLAAKYNKAVQEEDELSPEKLAIVNVGRQDAKKHLEEHVSNLMSSNIVQTLGTMLDTVVF 308
BLAST of FC871921 vs. ExPASy Swiss-Prot
Match: PSDE_MOUSE (26S proteasome non-ATPase regulatory subunit 14 OS=Mus musculus GN=Psmd14 PE=1 SV=2) HSP 1 Score: 321.242 bits (822), Expect = 4.237e-87 Identity = 159/215 (73.95%), Postives = 173/215 (80.47%), Query Frame = 3 Query: 6 MLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSNLGHLNKPSIQAFIHGLNRHYYSIAINYRXXXXXXXXXXXXXXXXWTDGLTLHRFDCHSKTNEQTVQEMLNLAVKYNKAVQEEDELPPEKLAIANVGRQDAKKHLEEHVSNLMSSNIVQTLGTMLDTVIF 650 MLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEAL++RAVAVVVDPIQSVKGKVVIDAFRLIN M+LG EPRQTTSNLGHLNKPSIQA IHGLNRHYYSI INYR W +GLTL + H K NE V+EML LA YNKAV+EED++ PE+LAI NVG+QD K+HLEEHV LM+SNIVQ L MLDTV+F Sbjct: 95 MLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPIQSVKGKVVIDAFRLINANMMVLGHEPRQTTSNLGHLNKPSIQALIHGLNRHYYSITINYRKNELEQKMLLNLHKKSWMEGLTLQDYSEHCKHNESVVKEMLELAKNYNKAVEEEDKMTPEQLAIKNVGKQDPKRHLEEHVDVLMTSNIVQCLAAMLDTVVF 309
BLAST of FC871921 vs. ExPASy Swiss-Prot
Match: PSDE_HUMAN (26S proteasome non-ATPase regulatory subunit 14 OS=Homo sapiens GN=PSMD14 PE=1 SV=1) HSP 1 Score: 321.242 bits (822), Expect = 4.237e-87 Identity = 159/215 (73.95%), Postives = 173/215 (80.47%), Query Frame = 3 Query: 6 MLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSNLGHLNKPSIQAFIHGLNRHYYSIAINYRXXXXXXXXXXXXXXXXWTDGLTLHRFDCHSKTNEQTVQEMLNLAVKYNKAVQEEDELPPEKLAIANVGRQDAKKHLEEHVSNLMSSNIVQTLGTMLDTVIF 650 MLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEAL++RAVAVVVDPIQSVKGKVVIDAFRLIN M+LG EPRQTTSNLGHLNKPSIQA IHGLNRHYYSI INYR W +GLTL + H K NE V+EML LA YNKAV+EED++ PE+LAI NVG+QD K+HLEEHV LM+SNIVQ L MLDTV+F Sbjct: 95 MLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPIQSVKGKVVIDAFRLINANMMVLGHEPRQTTSNLGHLNKPSIQALIHGLNRHYYSITINYRKNELEQKMLLNLHKKSWMEGLTLQDYSEHCKHNESVVKEMLELAKNYNKAVEEEDKMTPEQLAIKNVGKQDPKRHLEEHVDVLMTSNIVQCLAAMLDTVVF 309
BLAST of FC871921 vs. ExPASy Swiss-Prot
Match: PSDE_DROME (26S proteasome non-ATPase regulatory subunit 14 OS=Drosophila melanogaster GN=Rpn11 PE=1 SV=1) HSP 1 Score: 316.235 bits (809), Expect = 1.363e-85 Identity = 152/215 (70.70%), Postives = 175/215 (81.40%), Query Frame = 3 Query: 6 MLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSNLGHLNKPSIQAFIHGLNRHYYSIAINYRXXXXXXXXXXXXXXXXWTDGLTLHRFDCHSKTNEQTVQEMLNLAVKYNKAVQEEDELPPEKLAIANVGRQDAKKHLEEHVSNLMSSNIVQTLGTMLDTVIF 650 MLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEAL++RAVAVVVDPIQSVKGKVVIDAFRLINP ++LGQEPRQTTSNLGHL KPS+QA IHGLNRHYYSI+INYR W DGLTL ++ H NE TV EML+LA YNK++++E+++ PE+LAI NVG+QD K+HLEE V +M +NIVQ LG MLDT++F Sbjct: 93 MLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPIQSVKGKVVIDAFRLINPNMLVLGQEPRQTTSNLGHLQKPSVQALIHGLNRHYYSISINYRKNELEQKMLLNLHKKSWKDGLTLSDYNEHCSINEDTVAEMLDLAKNYNKSLEDEEKMTPEQLAIKNVGKQDPKRHLEEKVDKVMQNNIVQCLGAMLDTIVF 307
BLAST of FC871921 vs. ExPASy Swiss-Prot
Match: RPN11_SCHPO (26S proteasome regulatory subunit rpn11 OS=Schizosaccharomyces pombe GN=rpn11 PE=1 SV=2) HSP 1 Score: 275.789 bits (704), Expect = 2.042e-73 Identity = 135/216 (62.50%), Postives = 157/216 (72.69%), Query Frame = 3 Query: 3 NMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSNLGHLNKPSIQAFIHGLNRHYYSIAINYRXXXXXXXXXXXXXXXXWTDGLTLHRFDCHSKTNEQTVQEMLNLAVKYNKAVQEEDELPPEKLAIANVGRQDAKKHLEEHVSNLMSSNIVQTLGTMLDTVIF 650 NM+DMLKQTGRPEMVVGWYHSHPGFGCWLS VDINTQQSFE L RAVAVVVDPIQSVKGKVVIDAFRLINP T+M+GQEPRQTTSNLGH+NKPSIQA IHGL RHYYS+ INY+ W GL L F+ ++ N ++ +M +L+ +Y + VQ E L PE+L I VG+QD KKHL+ V + +NI L MLD+V F Sbjct: 93 NMMDMLKQTGRPEMVVGWYHSHPGFGCWLSSVDINTQQSFEQLTPRAVAVVVDPIQSVKGKVVIDAFRLINPSTLMMGQEPRQTTSNLGHINKPSIQALIHGLGRHYYSLRINYKKTELEEIMLLNLHKQPWAHGLLLENFNSAAEKNHASIDKMKSLSEQYTERVQNEVTLSPEQLRIQYVGKQDPKKHLDAEVQKCIDNNISSMLACMLDSVAF 308
BLAST of FC871921 vs. ExPASy Swiss-Prot
Match: PSDE_CAEEL (26S proteasome non-ATPase regulatory subunit 14 OS=Caenorhabditis elegans GN=rpn-11 PE=1 SV=1) HSP 1 Score: 273.092 bits (697), Expect = 1.323e-72 Identity = 133/212 (62.74%), Postives = 159/212 (75.00%), Query Frame = 3 Query: 6 MLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSNLGHLNKPSIQAFIHGLNRHYYSIAINYRXXXXXXXXXXXXXXXXWTDGLTLHRFDCHSKTNEQTVQEMLNLAVKYNKAVQEEDELPPEKLAIANVGRQDAKKHLEEHVSNLMSSNIVQTLGTMLDT 641 MLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEAL+ RAVAVVVDPIQSVKGKVVIDAFR INPQ+M L QEPRQTTSNLGHL KPSIQA IHGLNRHYYSI I YR W D +++ + + N++ ++ ML LA Y KA+++E + ++LAI NVG+ D K+H+ + VS +++ NIVQ+L M+ T Sbjct: 97 MLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSDRAVAVVVDPIQSVKGKVVIDAFRTINPQSMALNQEPRQTTSNLGHLQKPSIQALIHGLNRHYYSIPIAYRTHDLEQKMLLNLNKLSWMDAVSVENYSKCGEQNKEHLKAMLKLAKNYKKALEDEKNMTDQELAIKNVGKMDPKRHIADEVSKMLNDNIVQSLAGMMAT 308
BLAST of FC871921 vs. ExPASy Swiss-Prot
Match: PSDE_DICDI (26S proteasome non-ATPase regulatory subunit 14 OS=Dictyostelium discoideum GN=psmD14 PE=3 SV=1) HSP 1 Score: 258.84 bits (660), Expect = 2.583e-68 Identity = 126/215 (58.60%), Postives = 154/215 (71.63%), Query Frame = 3 Query: 6 MLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSNLGHLNKPSIQAFIHGLNRHYYSIAINYRXXXXXXXXXXXXXXXXWTDGLTLHRFDCHSKTNEQTVQEMLNLAVKYNKAVQEEDELPPEKLAIANVGRQDAKKHLEEHVSNLMSSNIVQTLGTMLDTVIF 650 MLDMLKQTGR E+V+GWYHSHPGFGCWLS VD+NTQQSFE L RAVAVVVDP+QSV+GKVVIDAFR I EPRQ TSNLGHL PSIQA IHGLNR+YYSIAINYR WT+GL + +FD H ++NE+ + +L L +Y K++Q+ED++ PEK ++ VG+ D K+HL V LM++N+V+ L MLDTV F Sbjct: 95 MLDMLKQTGRDEIVIGWYHSHPGFGCWLSSVDVNTQQSFEQLQSRAVAVVVDPLQSVRGKVVIDAFRTIKTSPT---AEPRQITSNLGHLQDPSIQALIHGLNRNYYSIAINYRKNELEQKMLLNLHKKKWTEGLIVDKFDTHEQSNEKQINNLLELTKQYQKSIQDEDKIEPEKKEVSAVGKLDPKRHLISDVHTLMANNVVRVLTVMLDTVTF 306
BLAST of FC871921 vs. ExPASy Swiss-Prot
Match: RPN11_ASHGO (26S proteasome regulatory subunit RPN11 OS=Ashbya gossypii GN=RPN11 PE=3 SV=1) HSP 1 Score: 241.891 bits (616), Expect = 3.267e-63 Identity = 117/213 (54.93%), Postives = 149/213 (69.95%), Query Frame = 3 Query: 6 MLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSNLGHLNKPSIQAFIHGLNRHYYSIAINYRXXXXXXXXXXXXXXXXWTDGLTLHRFDCHSKTNEQTVQEMLNLAVKYNKAVQEEDELPPEKLAIANVGRQDAKKHLEEHVSNLMSSNIVQTLGTMLDTV 644 M+DMLKQTGR +MVVGWYHSHPGFGCWLS VD++TQ+SFE LN RAVAVVVDPIQSVKGKVVIDAFRLI+P T++ QEPRQTTSN+G LNKP+IQ+ IHGLNRHYYS+ I+Y W GL +H + + N + ++ + +A +Y K ++EE EL ++L VG+QD KKHL E ++ NIV L +++V Sbjct: 96 MMDMLKQTGRDQMVVGWYHSHPGFGCWLSSVDVDTQRSFEQLNSRAVAVVVDPIQSVKGKVVIDAFRLISPATVVRNQEPRQTTSNVGLLNKPNIQSLIHGLNRHYYSLNIDYHKTSAELNMLMNLHKEQWQSGLKMHDYKEKERINLEATKKSVRIAEQYTKRIEEEKELTEDELKTRYVGKQDPKKHLSETAERVLEENIVSVLTAGVNSV 308
BLAST of FC871921 vs. ExPASy Swiss-Prot
Match: RPN11_YEAST (26S proteasome regulatory subunit RPN11 OS=Saccharomyces cerevisiae GN=RPN11 PE=1 SV=1) HSP 1 Score: 235.343 bits (599), Expect = 3.058e-61 Identity = 117/213 (54.93%), Postives = 146/213 (68.54%), Query Frame = 3 Query: 6 MLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSNLGHLNKPSIQAFIHGLNRHYYSIAINYRXXXXXXXXXXXXXXXXWTDGLTLHRFDCHSKTNEQTVQEMLNLAVKYNKAVQEEDELPPEKLAIANVGRQDAKKHLEEHVSNLMSSNIVQTLGTMLDTV 644 M+DMLKQTGR +MVVGWYHSHPGFGCWLS VD+NTQ+SFE LN RAVAVVVDPIQSVKGKVVIDAFRLI+ ++ EPRQTTSN G LNK +IQA IHGLNRHYYS+ I+Y W GL ++ ++ ++N + M+ +A +Y+K ++EE EL E+L VGRQD KKHL E + +NIV L +++V Sbjct: 91 MMDMLKQTGRDQMVVGWYHSHPGFGCWLSSVDVNTQKSFEQLNSRAVAVVVDPIQSVKGKVVIDAFRLIDTGALINNLEPRQTTSNTGLLNKANIQALIHGLNRHYYSLNIDYHKTAKETKMLMNLHKEQWQSGLKMYDYEEKEESNLAATKSMVKIAEQYSKRIEEEKELTEEELKTRYVGRQDPKKHLSETADETLENNIVSVLTAGVNSV 303
BLAST of FC871921 vs. ExPASy Swiss-Prot
Match: RPN11_CANGA (26S proteasome regulatory subunit RPN11 OS=Candida glabrata GN=RPN11 PE=3 SV=1) HSP 1 Score: 230.335 bits (586), Expect = 9.837e-60 Identity = 114/213 (53.52%), Postives = 143/213 (67.14%), Query Frame = 3 Query: 6 MLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSNLGHLNKPSIQAFIHGLNRHYYSIAINYRXXXXXXXXXXXXXXXXWTDGLTLHRFDCHSKTNEQTVQEMLNLAVKYNKAVQEEDELPPEKLAIANVGRQDAKKHLEEHVSNLMSSNIVQTLGTMLDTV 644 M+DMLKQTGR +MVVGWYHSHPGFGCWLS VD+NTQ+SFE LN RAVAVVVDPIQSVKGKVVIDAFRLI+ ++ QEPRQTTSN G +NK +IQA IHGLNRHYYS+ I+Y W GL + + N + + M+ +A +Y+K ++EE EL E+L VG+QD KKHL + N + N V L ++++ Sbjct: 91 MMDMLKQTGRDQMVVGWYHSHPGFGCWLSSVDVNTQKSFEQLNNRAVAVVVDPIQSVKGKVVIDAFRLIDTGALINNQEPRQTTSNSGLMNKANIQALIHGLNRHYYSLNIDYHKTPAETKMLLNLHKEQWQSGLKMQDYQEKETENLEATKRMVAVAQQYSKRIEEEKELSEEELKTRYVGKQDPKKHLAKTAENTLEENTVSVLTAGVNSI 303 The following BLAST results are available for this feature:
BLAST of FC871921 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 32
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC871921 ID=FC871921; Name=FC871921; organism=Citrus sinensis; type=EST; length=821bpback to top |