EY665756

Overview
NameEY665756
Unique NameEY665756
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length858
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY665756 vs. ExPASy Swiss-Prot
Match: TT12_ARATH (Protein TRANSPARENT TESTA 12 OS=Arabidopsis thaliana GN=TT12 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.523e-21
Identity = 61/190 (32.11%), Postives = 104/190 (54.74%), Query Frame = 3 
Query:  207 LKGRVWKESKKLWRVAFPAMLARVSQYGMFVITQGFIGHLGEVELAAYALIQIIAVRFSNGILIGMSSATETLCGQAFGAKQYHMMGIYLQRSWIINLATGTILLPAFIFAADIFKLLGETTDIANRAGDISLWFIGILYFFVFQLNDQKYLEAQLQKMIVGWLFAVAFVVQGGLAWNLWEQKLNLGIPG 776
            LK  VW ESK LW ++  +++  V  Y +  +T  F GHLG ++LA  ++  +     + GI++GM+SA +T+CGQA+GA+QY  MGI  QR+ +++LA    L   + ++  I K +G++  IA+     +   I  +Y F      Q++L+AQ     + ++    F++   L W L    L+ G+ G
Sbjct:   45 LKLAVW-ESKLLWTLSGASIVVSVLNYMLSFVTVMFTGHLGSLQLAGASIATVGIQGLAYGIMLGMASAVQTVCGQAYGARQYSSMGIICQRAMVLHLAAAVFLTFLYWYSGPILKTMGQSVAIAHEGQIFARGMIPQIYAFALACPMQRFLQAQNIVNPLAYMSLGVFLLHTLLTW-LVTNVLDFGLLG 232
The following BLAST results are available for this feature:
BLAST of EY665756 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
TT12_ARATH2.523e-2132.11Protein TRANSPARENT TESTA 12 OS=Arabidopsis thalia... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-102-095-C02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665756 ID=EY665756; Name=EY665756; organism=Citrus sinensis; type=EST; length=858bp
CATCATCCCATTCCCCAGCCCTTTTCTTTGCTTGCCTCTACTTTCATATC
TCCTCTGCCTATGCATTCTTGAAGTGAGAAATTAATCTCTTGGGCTGAAA
CCCTAGCTAGAAGCTATCCTCCTTGTTCAACTAATCAAGCAAGAACTTCT
CTCAAGGCCAAATGGAGGAGAGACTCCTCGGTTCAGAAGCGAAAGATATT
GATGATTTAAAAGGGAGGGTTTGGAAAGAATCGAAAAAGCTATGGAGGGT
TGCATTTCCTGCAATGTTAGCTAGGGTTTCTCAGTATGGTATGTTTGTTA
TCACACAAGGATTTATTGGTCATCTTGGCGAGGTTGAGCTTGCAGCTTAC
GCGCTCATTCAAATCATAGCCGTCCGATTTTCAAATGGGATTTTGATCGG
CATGTCAAGCGCAACTGAAACTCTGTGCGGGCAAGCATTTGGAGCAAAGC
AATACCACATGATGGGTATCTACTTGCAAAGATCATGGATCATAAATCTT
GCTACTGGAACAATATTGCTTCCTGCGTTTATCTTCGCAGCAGATATTTT
CAAACTGCTCGGAGAAACAACAGACATAGCAAACAGAGCCGGAGACATCT
CACTTTGGTTCATTGGCATTCTCTATTTCTTTGTCTTTCAGCTTAACGAT
CAAAAGTACTTGGAAGCACAGCTTCAGAAAATGATTGTCGGATGGCTTTT
CGCTGTTGCATTTGTTGTTCAGGGGGGCTTGGCTTGGAATCTTTGGGAAC
AAAAATTAAACTTGGGGATTCCTGGGGGCAATGAGTGGAATGGTAAACCC
AAAGGTGGGGTTAAAATAAACCGGACACGCTTTGGGTATTACCTTTTGGC
GGGCTGGG
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