CX674974
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX674974 vs. ExPASy Swiss-Prot
Match: SR54C_ARATH (Signal recognition particle 54 kDa protein, chloroplastic OS=Arabidopsis thaliana GN=FFC PE=1 SV=1) HSP 1 Score: 246.514 bits (628), Expect = 1.310e-64 Identity = 123/159 (77.36%), Postives = 142/159 (89.31%), Query Frame = -1 Query: 339 QKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLEDALKSEQKAPPGTAXXXXXXXXXRQFVDPAST 815 QKKIMSA FDFNDFLKQTR VA+MGSM+RV+GMIPGMGK++PAQ+REAEK+L +MEAMIE MTPEERE+PELLAESP RRKR+A+DSGKTEQQVS LVAQ+FQMRV+MKNLMGVMEGGS+PALS LEDALK+EQKAPPGTA ++FV+ AS+ Sbjct: 395 QKKIMSAKFDFNDFLKQTRAVAKMGSMTRVLGMIPGMGKVSPAQIREAEKNLLVMEAMIEVMTPEERERPELLAESPERRKRIAKDSGKTEQQVSALVAQIFQMRVKMKNLMGVMEGGSIPALSGLEDALKAEQKAPPGTARRKRKADSRKKFVESASS 553
BLAST of CX674974 vs. ExPASy Swiss-Prot
Match: SRP54_SYNY3 (Signal recognition particle protein OS=Synechocystis sp. (strain PCC 6803) GN=ffh PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 5.379e-26 Identity = 59/119 (49.58%), Postives = 82/119 (68.91%), Query Frame = -1 Query: 462 QKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL-MGVMEGG 815 Q KI+ A FDF+DF+KQ R + MGS+ ++ MIPGM K++ + + EK LK EAMI +MT EER+ P+LLA+SP RR+R+AQ SG +E VS+L+ +MR M+ + MG M GG Sbjct: 319 QNKILEATFDFDDFIKQMRFMKNMGSLGGLLKMIPGMNKLSSGDIEKGEKELKRTEAMISSMTTEERKNPDLLAKSPSRRRRIAQGSGHSETDVSKLITNFTKMRTMMQQMGMGGMPGG 437
BLAST of CX674974 vs. ExPASy Swiss-Prot
Match: SRP54_SYNE7 (Signal sequence-binding protein OS=Synechococcus elongatus (strain PCC 7942) GN=ffh PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 7.767e-25 Identity = 58/127 (45.67%), Postives = 84/127 (66.14%), Query Frame = -1 Query: 438 QKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG-KITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 815 Q+KI++A FDF DFLKQ R + MGS++ I +IPG+G KI Q+R+ E+ LK +EAMI +MTP+ER P+LL+ SP RR R+A+ G+TE ++ Q++ Q QMR M+ M G P + + Sbjct: 319 QEKILAAKFDFTDFLKQMRLLKNMGSLAGFIKLIPGLGGKINDEQLRQGERQLKRVEAMINSMTPQERRDPDLLSNSPSRRHRIAKGCGQTEAEIRQIIQQFQQMRTMMQQ----MSQGGFPGMGGM 441
BLAST of CX674974 vs. ExPASy Swiss-Prot
Match: SRP54_STRMU (Signal recognition particle protein OS=Streptococcus mutans GN=ffh PE=3 SV=3) HSP 1 Score: 80.4925 bits (197), Expect = 1.243e-14 Identity = 47/117 (40.17%), Postives = 68/117 (58.12%), Query Frame = -1 Query: 465 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 812 +K+ +FDFNDF++Q V MGSM ++ MIPGM A V+ E + A++ +MTPEERE P+LL +P RR+R+A SG T V++ + Q + K + GVM G Sbjct: 322 EKMRENSFDFNDFIEQLDQVQNMGSMEDILKMIPGMANNPALANVKVDEGEIARKRAIVSSMTPEERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
BLAST of CX674974 vs. ExPASy Swiss-Prot
Match: SRP54_MYCLE (Signal recognition particle protein OS=Mycobacterium leprae GN=ffh PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.243e-14 Identity = 44/131 (33.59%), Postives = 74/131 (56.49%), Query Frame = -1 Query: 417 KIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLEDALKSE 809 KI++ DFL+Q V +MG + ++GM+PG G++ + +K L ++A+I MTP+ER P+++ S RR R+A SG T +V+QLV + F+ R M +++G G +P + KS+ Sbjct: 328 KIVAGELTLEDFLEQMLAVRKMGLIGNLLGMLPGAGQVKEVLEQVDDKQLDRLQAIIRGMTPQERADPKIINAS--RRLRIANGSGVTVSEVNQLVDRFFEARKMMSSVLG---GMGIPGMGRKSATRKSK 453
BLAST of CX674974 vs. ExPASy Swiss-Prot
Match: SRP54_HELPJ (Signal recognition particle protein OS=Helicobacter pylori J99 GN=ffh PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.243e-14 Identity = 53/143 (37.06%), Postives = 82/143 (57.34%), Query Frame = -1 Query: 402 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKI--MEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVA---QLFQMRVRMKNLMGVMEGGSLPALSNLEDALKSEQKAPP 812 KK+ F FNDFL Q V ++GSMS +I MIPG+G + A + + E SL++ ++AM+ +MT +ERE PE+L S RRKR+A SG ++++++ Q +M R+ N G+ + L NL K++ PP Sbjct: 313 KKLKKGQFTFNDFLNQIEKVKKLGSMSSLISMIPGLGNMASALKDTDLESSLEVKKIKAMVNSMTKKERENPEILNGS--RRKRIALGSGLEVSEINRIIKRFDQASKMAKRLTNKKGISD------LMNLMSQAKNQ--TPP 445
BLAST of CX674974 vs. ExPASy Swiss-Prot
Match: SRP54_HELPY (Signal recognition particle protein OS=Helicobacter pylori GN=ffh PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.616e-14 Identity = 52/143 (36.36%), Postives = 82/143 (57.34%), Query Frame = -1 Query: 402 KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKI--MEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVA---QLFQMRVRMKNLMGVMEGGSLPALSNLEDALKSEQKAPP 812 KK+ F FNDFL Q V ++GSMS +I MIPG+G + A + + E SL++ ++AM+ +MT +E+E PE+L S RRKR+A SG ++++++ Q +M R+ N G+ + L NL K++ PP Sbjct: 313 KKLKKGQFTFNDFLNQIEKVKKLGSMSSLISMIPGLGNMASALKDTDLESSLEVKKIKAMVNSMTKKEQENPEILNGS--RRKRIALGSGLEVSEINRIIKRFDQASKMAKRLTNKKGISD------LMNLMSQAKNQ--TPP 445
BLAST of CX674974 vs. ExPASy Swiss-Prot
Match: SRP54_MYCTU (Signal recognition particle protein OS=Mycobacterium tuberculosis GN=ffh PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.723e-14 Identity = 44/131 (33.59%), Postives = 72/131 (54.96%), Query Frame = -1 Query: 417 KIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLEDALKSE 809 KI + DFL+Q V +MG + ++GM+PG ++ A +K L ++A+I MTP+ER P+++ S RR R+A SG T +V+QLV + F+ R M +++G G +P + KS+ Sbjct: 328 KIGAGELTLEDFLEQMLAVRKMGPIGNLLGMLPGAAQMKDALAEVDDKQLDRVQAIIRGMTPQERADPKIINAS--RRLRIANGSGVTVSEVNQLVERFFEARKMMSSMLG---GMGIPGIGRKSATRKSK 453
BLAST of CX674974 vs. ExPASy Swiss-Prot
Match: SRP54_MYCBO (Signal recognition particle protein OS=Mycobacterium bovis GN=ffh PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.723e-14 Identity = 44/131 (33.59%), Postives = 72/131 (54.96%), Query Frame = -1 Query: 417 KIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLEDALKSE 809 KI + DFL+Q V +MG + ++GM+PG ++ A +K L ++A+I MTP+ER P+++ S RR R+A SG T +V+QLV + F+ R M +++G G +P + KS+ Sbjct: 328 KIGAGELTLEDFLEQMLAVRKMGPIGNLLGMLPGAAQMKDALAEVDDKQLDRVQAIIRGMTPQERADPKIINAS--RRLRIANGSGVTVSEVNQLVERFFEARKMMSSMLG---GMGIPGIGRKSATRKSK 453
BLAST of CX674974 vs. ExPASy Swiss-Prot
Match: SRP54_RICCN (Signal recognition particle protein OS=Rickettsia conorii GN=ffh PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.052e-13 Identity = 43/112 (38.39%), Postives = 72/112 (64.29%), Query Frame = -1 Query: 483 KIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIM---EAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 809 K+ FD ND+L+Q R++ +MG ++ M+PG GKI Q+ +++ + KI+ EA+I +MTP+ER+ P+++ S RRKR+A +G T Q+V+ L+ Q Q+ MK + Sbjct: 323 KLKKGKFDLNDYLQQMRSIKKMGGFGSILSMLPGSGKIMD-QIDQSKLNSKIIEHQEAIILSMTPKERKNPDIINAS--RRKRIAVGAGTTVQKVNILLKQYKQISEIMKKV 431 The following BLAST results are available for this feature:
BLAST of CX674974 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
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Sequences
The
following sequences are available for this feature:
EST sequence >CX674974 ID=CX674974; Name=CX674974; organism=Citrus sinensis; type=EST; length=815bpback to top |