CX674973
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX674973 vs. ExPASy Swiss-Prot
Match: SR54C_ARATH (Signal recognition particle 54 kDa protein, chloroplastic OS=Arabidopsis thaliana GN=FFC PE=1 SV=1) HSP 1 Score: 317.39 bits (812), Expect = 5.693e-86 Identity = 178/253 (70.36%), Postives = 195/253 (77.08%), Query Frame = 2 Query: 29 MEAVQFSTVASRHYSATGKTFYNSRISAGKSTKFVSSWAASSDPTRLSSTSRNLFTRETWGLIDSKSXXXXXXXXXXXXXXAEMFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYIAGTEVKPSQI 787 MEA+QFS+V T N RI A S+ F S+ S+SRNL TRE W + SK+ AEMFGQLT GLEAAW+KLKGEE LTK+NI EPMRDIRRALLEADVSLPVVRRFVQ+VS+QAVG+G+IRGV+PDQQLVKIV DELVKLMGGEVSEL FAKS PTVILLAGLQGVGKTTV AKLA YLKKQGKSCML+AGDVYRPAAIDQLVILGEQVGVPVY AGT+VKP+ I Sbjct: 1 MEALQFSSV--NRVPCTLSCTGNRRIKAAFSSAFTGGTINSAS----LSSSRNLSTREIWSWVKSKTVVGHGRYRRSQVR-AEMFGQLTGGLEAAWSKLKGEEVLTKDNIAEPMRDIRRALLEADVSLPVVRRFVQSVSDQAVGMGVIRGVKPDQQLVKIVHDELVKLMGGEVSELQFAKSGPTVILLAGLQGVGKTTVCAKLACYLKKQGKSCMLIAGDVYRPAAIDQLVILGEQVGVPVYTAGTDVKPADI 246
BLAST of CX674973 vs. ExPASy Swiss-Prot
Match: SRP54_SYNE7 (Signal sequence-binding protein OS=Synechococcus elongatus (strain PCC 7942) GN=ffh PE=3 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 5.209e-47 Identity = 92/170 (54.12%), Postives = 127/170 (74.71%), Query Frame = 2 Query: 278 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYIAGTEVKPSQI 787 MF L LE AW KL+G++ +++ N+ E ++++RRALLEADV+L VV+ F+ V E+AVG +I G+RPDQQ +K+V DELV++MG L A PTVIL+AGLQG GKTT +AKLA +L+K+G+S +LVA DVYRPAAIDQL+ LG+Q+ VPV+ G++ P +I Sbjct: 1 MFDALAERLEQAWTKLRGQDKISESNVQEALKEVRRALLEADVNLGVVKEFIAQVQEKAVGTQVISGIRPDQQFIKVVYDELVQVMGETHVPLAQAAKAPTVILMAGLQGAGKTTATAKLALHLRKEGRSTLLVATDVYRPAAIDQLITLGKQIDVPVFELGSDANPVEI 170
BLAST of CX674973 vs. ExPASy Swiss-Prot
Match: SRP54_SYNY3 (Signal recognition particle protein OS=Synechocystis sp. (strain PCC 6803) GN=ffh PE=3 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 1.853e-44 Identity = 91/170 (53.53%), Postives = 123/170 (72.35%), Query Frame = 2 Query: 278 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYIAGTEVKPSQI 787 MF L LE AW KL+G++ +++ NI E ++++RRALL ADV+L VV+ F++ V ++A+G +I GV P QQ +KIV DELV LMG L A+ PTVIL+AGLQG GKTT +AKLA YL+KQ +S ++VA DVYRPAAIDQL LG+Q+ VPV+ G++ P +I Sbjct: 1 MFDALADRLEDAWKKLRGQDKISESNIKEALQEVRRALLAADVNLQVVKGFIKDVEQKALGADVISGVNPGQQFIKIVYDELVNLMGESNVPLAQAEQAPTVILMAGLQGTGKTTATAKLALYLRKQKRSALMVATDVYRPAAIDQLKTLGQQIDVPVFDLGSDANPVEI 170
BLAST of CX674973 vs. ExPASy Swiss-Prot
Match: SRP54_BACSU (Signal recognition particle protein OS=Bacillus subtilis GN=ffh PE=1 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 3.997e-39 Identity = 83/170 (48.82%), Postives = 122/170 (71.76%), Query Frame = 2 Query: 281 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYIAGTEVKPSQI 787 F L L+ +K++G+ ++++++ E MR++R ALLEADV+ VV+ FV+ VSE+AVG +++ + P QQ++K+V++EL +LMGGE S++ AK PTVI++ GLQG GKTT S KLAN L KK + MLVA D+YRPAAI QL LG+Q+ +PV+ G +V P +I Sbjct: 3 FEGLADRLQQTISKIRGKGKVSEQDVKEMMREVRLALLEADVNFKVVKDFVKKVSERAVGQDVMKSLTPGQQVIKVVQEELTELMGGEESKIAVAKRPPTVIMMVGLQGAGKTTTSGKLANLLRKKHNRKPMLVAADIYRPAAIKQLETLGKQLDMPVFSLGDQVSPVEI 172
BLAST of CX674973 vs. ExPASy Swiss-Prot
Match: SRP54_MYCTU (Signal recognition particle protein OS=Mycobacterium tuberculosis GN=ffh PE=3 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 5.772e-38 Identity = 83/159 (52.20%), Postives = 113/159 (71.07%), Query Frame = 2 Query: 278 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVY 754 MF L+ L AA L+G+ LT +I R+IR ALLEADVSLPVVR F+ + E+A G + + P QQ+VKIV +EL+ ++GGE EL FAK+ PTV++LAGLQG GKTT++ KLA L+ QG + +LVA D+ RPAA++QL ++GE+ GVPV+ Sbjct: 1 MFESLSDRLTAALQGLRGKGRLTDADIDATTREIRLALLEADVSLPVVRAFIHRIKERARGAEVSSALNPAQQVVKIVNEELISILGGETRELAFAKTPPTVVMLAGLQGSGKTTLAGKLAARLRGQGHTPLLVACDLQRPAAVNQLQVVGERAGVPVF 159
BLAST of CX674973 vs. ExPASy Swiss-Prot
Match: SRP54_MYCBO (Signal recognition particle protein OS=Mycobacterium bovis GN=ffh PE=3 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 5.772e-38 Identity = 83/159 (52.20%), Postives = 113/159 (71.07%), Query Frame = 2 Query: 278 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVY 754 MF L+ L AA L+G+ LT +I R+IR ALLEADVSLPVVR F+ + E+A G + + P QQ+VKIV +EL+ ++GGE EL FAK+ PTV++LAGLQG GKTT++ KLA L+ QG + +LVA D+ RPAA++QL ++GE+ GVPV+ Sbjct: 1 MFESLSDRLTAALQGLRGKGRLTDADIDATTREIRLALLEADVSLPVVRAFIHRIKERARGAEVSSALNPAQQVVKIVNEELISILGGETRELAFAKTPPTVVMLAGLQGSGKTTLAGKLAARLRGQGHTPLLVACDLQRPAAVNQLQVVGERAGVPVF 159
BLAST of CX674973 vs. ExPASy Swiss-Prot
Match: SRP54_MYCLE (Signal recognition particle protein OS=Mycobacterium leprae GN=ffh PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 1.089e-36 Identity = 80/159 (50.31%), Postives = 112/159 (70.44%), Query Frame = 2 Query: 278 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVY 754 MF L++ L L+G+ LT +I R+IR AL EADVSLPVVR FV + E+A G + + P QQ+VKIV +EL+ ++GGE +L FAK+ PTV++LAGLQG GKTT++ KLA L++QG + +LVA D+ RPAA++QL ++GE+ GVPV+ Sbjct: 1 MFESLSNRLTGVIQGLRGKGRLTDADIEATTREIRLALFEADVSLPVVRAFVHRIKERARGTEVSAALNPAQQIVKIVNEELIGILGGETRQLAFAKTPPTVVMLAGLQGSGKTTLAGKLAVRLRRQGHTPLLVACDLQRPAAVNQLQVVGERAGVPVF 159
BLAST of CX674973 vs. ExPASy Swiss-Prot
Match: SRP54_STRMU (Signal recognition particle protein OS=Streptococcus mutans GN=ffh PE=3 SV=3) HSP 1 Score: 150.214 bits (378), Expect = 1.204e-35 Identity = 75/164 (45.73%), Postives = 115/164 (70.12%), Query Frame = 2 Query: 281 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYIAGTE 769 F LT L+ + L+G+ L+++++ E ++IR ALLEADV+LPVV+ F++ V ++AVG +I + P QQ++KIV +EL ++G E +E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAIDQL LG+Q+ VPV+ GTE Sbjct: 3 FESLTERLQGVFKNLRGKRKLSEKDVQEVTKEIRLALLEADVALPVVKEFIKRVRKRAVGHEVIDTLDPSQQIIKIVNEELTAVLGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLANKLVKEENARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGTE 166
BLAST of CX674973 vs. ExPASy Swiss-Prot
Match: SRP54_ECOLI (Signal recognition particle protein OS=Escherichia coli (strain K12) GN=ffh PE=1 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.965e-34 Identity = 81/171 (47.37%), Postives = 106/171 (61.99%), Query Frame = 2 Query: 278 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYIAGTEVKPSQI 787 MF LT L + G LT++N+ + +R++R ALLEADV+LPVVR F+ V E+AVG + + + P Q+ VKIVR+ELV MG E L A P V+L+AGLQG GKTT KL +L+ K K ++V+ DVYRPAAI QL L EQVGV + + KP I Sbjct: 1 MFDNLTDRLSRTLRNISGRGRLTEDNVKDTLREVRMALLEADVALPVVREFINRVKEKAVGHEVNKSLTPGQEFVKIVRNELVAAMGEENQTLNLAAQPPAVVLMAGLQGAGKTTSVGKLGKFLREKHKKKVLVVSADVYRPAAIKQLETLAEQVGVDFFPSDVGQKPVDI 171
BLAST of CX674973 vs. ExPASy Swiss-Prot
Match: SRP54_ECOL6 (Signal recognition particle protein OS=Escherichia coli O6 GN=ffh PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.965e-34 Identity = 81/171 (47.37%), Postives = 106/171 (61.99%), Query Frame = 2 Query: 278 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYIAGTEVKPSQI 787 MF LT L + G LT++N+ + +R++R ALLEADV+LPVVR F+ V E+AVG + + + P Q+ VKIVR+ELV MG E L A P V+L+AGLQG GKTT KL +L+ K K ++V+ DVYRPAAI QL L EQVGV + + KP I Sbjct: 1 MFDNLTDRLSRTLRNISGRGRLTEDNVKDTLREVRMALLEADVALPVVREFINRVKEKAVGHEVNKSLTPGQEFVKIVRNELVAAMGEENQTLNLAAQPPAVVLMAGLQGAGKTTSVGKLGKFLREKHKKKVLVVSADVYRPAAIKQLETLAEQVGVDFFPSDVGQKPVDI 171 The following BLAST results are available for this feature:
BLAST of CX674973 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 112
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Sequences
The
following sequences are available for this feature:
EST sequence >CX674973 ID=CX674973; Name=CX674973; organism=Citrus sinensis; type=EST; length=788bpback to top |