EY665753
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665753 vs. ExPASy Swiss-Prot
Match: CLPAB_SOLLC (ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplastic OS=Solanum lycopersicum GN=CD4B PE=3 SV=1) HSP 1 Score: 356.681 bits (914), Expect = 9.750e-98 Identity = 198/278 (71.22%), Postives = 219/278 (78.78%), Query Frame = 1 Query: 1 LARGELPCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQPFVSAWTGLSG*KKPQLMNLIAFLKMKKTLSQKSYWVGM-KLAKVLNRAFRGDRVGTQKP--PFNQFGNFLFFRAPWGGRKTELGPKPGGLIIFGFKE 825 LARGEL CIGATTLDEYRKHIEKDPALERRFQPVKVPEP+VDETIQILKGLRERYEIHHKLRYTDE LV+AAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEA+ELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQI+AL+DK KE+SKAE+EA D GP+VTE DIQ VS+WTG+ +K LKM++TL + +G + K ++RA R RVG + P P F F P G K+EL K FG +E Sbjct: 396 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPTVDETIQILKGLRERYEIHHKLRYTDEDLVAAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEAKELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQITALIDKNKEVSKAESEAADTGPLVTEADIQHIVSSWTGIPV-EKVSTDESDRLLKMEETLHTRI--IGQDEAVKAISRAIRRARVGLKNPNRPIASF----IFSGPTGVGKSELA-KALAAYYFGSEE 665
BLAST of EY665753 vs. ExPASy Swiss-Prot
Match: CLPAA_SOLLC (ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4A, chloroplastic OS=Solanum lycopersicum GN=CD4A PE=3 SV=1) HSP 1 Score: 351.673 bits (901), Expect = 3.137e-96 Identity = 198/279 (70.97%), Postives = 218/279 (78.14%), Query Frame = 1 Query: 1 LARGELPCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGD-VGPVVTEVDIQPFVSAWTGLSG*KKPQLMNLIAFLKMKKTLSQKSYWVGM-KLAKVLNRAFRGDRVGTQKP--PFNQFGNFLFFRAPWGGRKTELGPKPGGLIIFGFKE 825 LARGEL CIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKL YTDEA+ +AA+LS+QYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISAL+DK KE SKAE+EAGD GP+VTE DIQ VS+WTG+ +K LKM++TL + +G + K ++RA R RVG + P P F F P G K+EL K FG +E Sbjct: 398 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLHYTDEAIEAAAKLSHQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALIDKNKEKSKAESEAGDAAGPIVTEADIQHIVSSWTGIPV-EKVSTDESDRLLKMEETLHTRV--IGQDEAVKAISRAIRRARVGLKNPNRPIASF----IFSGPTGVGKSELA-KSLATYYFGSEE 668
BLAST of EY665753 vs. ExPASy Swiss-Prot
Match: CLPC_PEA (ATP-dependent Clp protease ATP-binding subunit clpC homolog, chloroplastic OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 343.199 bits (879), Expect = 1.116e-93 Identity = 189/278 (67.99%), Postives = 215/278 (77.34%), Query Frame = 1 Query: 1 LARGELPCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQPFVSAWTGLSG*KKPQLMNLIAFLKMKKTLSQKSYWVGM-KLAKVLNRAFRGDRVGTQKP--PFNQFGNFLFFRAPWGGRKTELGPKPGGLIIFGFKE 825 LARGEL CIGATTLDEYRKHIEKDP LERRFQPVKVPEP+VDETIQILKGLRERYEIHHKLRYTDEAL++AAQLSYQYISDRFLPDKAIDL+DEAGSRVRL+HAQLPEEA+EL+KE+R+I KEK E VR QDFEKAGELRD+EMDLKAQISAL++KGKEMSKAETE D GP+VTEVDIQ VS+WTG+ K LKM+ TL ++ +G + + ++RA R RVG + P P F F P G K+EL K FG +E Sbjct: 396 LARGELQCIGATTLDEYRKHIEKDPDLERRFQPVKVPEPTVDETIQILKGLRERYEIHHKLRYTDEALIAAAQLSYQYISDRFLPDKAIDLVDEAGSRVRLQHAQLPEEAKELDKEVRKIVKEKEEYVRNQDFEKAGELRDKEMDLKAQISALIEKGKEMSKAETETADEGPIVTEVDIQHIVSSWTGIPV-DKVSADESDRLLKMEDTLHKRI--IGQDEAVQAISRAIRRARVGLKNPNRPIASF----IFSGPTGVGKSELA-KALAAYYFGSEE 665
BLAST of EY665753 vs. ExPASy Swiss-Prot
Match: CLPA_BRANA (ATP-dependent Clp protease ATP-binding subunit clpA homolog, chloroplastic (Fragment) OS=Brassica napus GN=CLPA PE=2 SV=1) HSP 1 Score: 342.428 bits (877), Expect = 1.903e-93 Identity = 191/276 (69.20%), Postives = 220/276 (79.71%), Query Frame = 1 Query: 1 LARGELPCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQPFVSAWTGLSG*KKPQLMNLIAFLKMKKTLSQKSYWVGM-KLAKVLNRAFRGDRVGTQKPPFNQFGNFLFFRAPWGGRKTELGPKPGGLIIFGFKE 825 LARGEL CIGATTLDEYRKHIEKDPALERRFQPVKVPEP+VDETIQILKGLRERYEIHHKLRYTDE+LV+AAQLSYQYISDRFLPD+AIDL+DEAGSRVRLRHAQ+PEEARELEKELRQITKE NEAVRGQDFEKAG LRDRE++L+A++SA+ KGKEMSKAE+E GD GP+VTE DIQ VS+WTG+ +K LKM++TL ++ +G + K ++RA R RVG K P +F+FF P G K+EL K FG +E Sbjct: 345 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPTVDETIQILKGLRERYEIHHKLRYTDESLVAAAQLSYQYISDRFLPDRAIDLMDEAGSRVRLRHAQVPEEARELEKELRQITKE-NEAVRGQDFEKAGTLRDREIELRAEVSAIQAKGKEMSKAESETGDEGPMVTESDIQHIVSSWTGILV-EKVSTDESDLLLKMEETLHKRV--IGQDEAVKAISRAIRRARVGL-KNPNRPIASFIFF-GPTGVGKSELA-KALAAYYFGCEE 613
BLAST of EY665753 vs. ExPASy Swiss-Prot
Match: CLPC_GUITH (ATP-dependent Clp protease ATP-binding subunit clpA homolog OS=Guillardia theta GN=clpC PE=3 SV=1) HSP 1 Score: 255.758 bits (652), Expect = 2.342e-67 Identity = 153/266 (57.52%), Postives = 186/266 (69.92%), Query Frame = 1 Query: 1 LARGELPCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALV--DKGKEMSKAETEAGDVGPVVTEVDIQPFVSAWTGLSG*KKPQLMNLIAFLKMKKTLSQKSYWVGMKLAKV-LNRAFRGDRVGTQKP--PFNQFGNFLFFRAPWGGRKTEL 783 LARGE+ CIGATTL+EYRKHIEKD ALERRFQPV V EPSV+ETI+IL GLR+RYE HHKL +DEAL +AA+ + QYI+DRFLPDKAIDLIDEAGSRVRL ++QLP AREL+KELR+I K+K+EAVR QDFE AG+LRDREM++KAQI+A+ KG E + E VVTE DI V+AWTG+ K L+M++TL + +G A V +++A R RVG + P P F F P G KTEL Sbjct: 303 LARGEMQCIGATTLEEYRKHIEKDSALERRFQPVMVGEPSVEETIEILYGLRDRYEKHHKLVISDEALSAAAKFADQYIADRFLPDKAIDLIDEAGSRVRLMNSQLPPAARELDKELREILKQKDEAVRSQDFETAGQLRDREMEIKAQIAAIAHSKKGDEENTKEVS------VVTEEDIAQIVAAWTGIPV-NKMTRSESEKLLQMEETLHGRI--IGQDEAVVAVSKAIRRARVGLKNPNRPIASF----IFSGPTGVGKTEL 555
BLAST of EY665753 vs. ExPASy Swiss-Prot
Match: CLPC_PORYE (ATP-dependent Clp protease ATP-binding subunit clpA homolog OS=Porphyra yezoensis GN=clpC PE=3 SV=1) HSP 1 Score: 243.817 bits (621), Expect = 9.211e-64 Identity = 146/264 (55.30%), Postives = 180/264 (68.18%), Query Frame = 1 Query: 1 LARGELPCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQPFVSAWTGLSG*KKPQLMNLIAFLKMKKTLSQKSYWVGMKLAKV-LNRAFRGDRVGTQKP--PFNQFGNFLFFRAPWGGRKTEL 783 LARGEL CIGATTL+EYRKHIEKDPALERRFQPV V EPSV+ETI+IL GLR+RYE HH+L +D AL +AA+ + QYISDRFLPDKAIDLIDEAGSRVRL ++QLP AREL+KELR + K K+EA+R Q +E A + R REM++KAQI+A+ + K E + PVVTE DI V+AWTG+ K + + M++TL + +G A V ++RA R RVG + P P F F P G KTEL Sbjct: 306 LARGELQCIGATTLEEYRKHIEKDPALERRFQPVVVGEPSVEETIEILFGLRDRYEKHHQLTMSDGALAAAAKYANQYISDRFLPDKAIDLIDEAGSRVRLLNSQLPPAARELDKELRAVLKTKDEAIRAQKYETAEQYRAREMEIKAQIAAIA----QSKKNEPDLNLEDPVVTEDDIAEIVAAWTGIPVTKLTK-SESEKLMHMEETLHGRI--IGQDEAVVAVSRAIRRARVGLKNPNRPIASF----IFSGPTGVGKTEL 558
BLAST of EY665753 vs. ExPASy Swiss-Prot
Match: CLPC_PORPU (ATP-dependent Clp protease ATP-binding subunit clpA homolog OS=Porphyra purpurea GN=clpC PE=3 SV=1) HSP 1 Score: 242.276 bits (617), Expect = 2.680e-63 Identity = 144/264 (54.55%), Postives = 180/264 (68.18%), Query Frame = 1 Query: 1 LARGELPCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQPFVSAWTGLSG*KKPQLMNLIAFLKMKKTLSQKSYWVGMKLAKV-LNRAFRGDRVGTQKP--PFNQFGNFLFFRAPWGGRKTEL 783 LARGEL CIGATTL+EYRKHIEKDPALERRF PV V EPSV+ETI+IL GLR+RYE HH+L +D AL +AA+ + QYISDRFLPDKAIDLIDEAGSRVRL ++QLP AREL+KELR + K K+EA+R Q +E A + R REM++KAQI+A+ + K E + PVVTE DI V+AWTG+ K + ++M++TL + +G A + ++RA R RVG + P P F F P G KTEL Sbjct: 306 LARGELQCIGATTLEEYRKHIEKDPALERRFHPVVVGEPSVEETIEILFGLRDRYEKHHQLTMSDGALAAAAKYANQYISDRFLPDKAIDLIDEAGSRVRLLNSQLPPAARELDKELRAVLKTKDEAIRAQKYETAEQYRAREMEIKAQIAAIA----QSKKNEPDLNLEDPVVTEDDIAEIVAAWTGIPVTKLTK-SESEKLMQMEETLHGRI--IGQDEAVIAVSRAIRRARVGLKNPNRPIASF----IFSGPTGVGKTEL 558
BLAST of EY665753 vs. ExPASy Swiss-Prot
Match: CLPC_CYACA (ATP-dependent Clp protease ATP-binding subunit clpA homolog OS=Cyanidium caldarium GN=clpC PE=3 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 5.054e-62 Identity = 142/278 (51.08%), Postives = 183/278 (65.83%), Query Frame = 1 Query: 1 LARGELPCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQPFVSAWTGLSG*KKPQLMNLIAFLKMKKTLSQKSYWVGMKLAKV-LNRAFRGDRVGTQKP--PFNQFGNFLFFRAPWGGRKTELGPKPGGLIIFGFKE 825 LARGEL CIGATTL+EYRKHIEKD ALERRFQPV V EP+V+ETI+IL+GLR+RYE HH+L+ +D A+V+AA+LS QYI+DRFLPDKAIDL+DEA SRVRL + +LP A L++ELR I K KNE +R DFE+A + R+RE+++K Q++AL+ KE + E P+V E DI VS+WTG+ K L M++TL + VG A + +++A R RVG + P P F F P G KTEL K FG +E Sbjct: 334 LARGELQCIGATTLEEYRKHIEKDAALERRFQPVMVEEPTVEETIEILRGLRDRYEAHHRLKISDSAIVAAAKLSDQYIADRFLPDKAIDLVDEASSRVRLMNYKLPPSAEYLDEELRHIQKIKNELIRSGDFEEASQFREREIEVKVQMAALMKAKKEAIEEELALNP--PIVNEDDIANIVSSWTGIPV-SKLTKSESEKLLHMEETLHSRI--VGQNEAVIAVSKAIRRARVGLKNPNRPIASF----IFSGPTGVGKTEL-TKAMASYFFGSEE 601
BLAST of EY665753 vs. ExPASy Swiss-Prot
Match: CLPB_OCEIH (Chaperone protein clpB OS=Oceanobacillus iheyensis GN=clpB PE=3 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 3.748e-57 Identity = 133/264 (50.38%), Postives = 171/264 (64.77%), Query Frame = 1 Query: 1 LARGELPCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQPFVSAWTG--LSG*KKPQLMNLIAFLKMKKTLSQKSYWVGMKLA-KVLNRAFRGDRVGTQKPPFNQFGNFLFFRAPWGGRKTEL 783 LARGEL CIGATTLDEYRK+IEKD ALERRFQP++V EP+++ETIQIL GLR+RYE HH++ TDEA+ +AA LS +YI+DRFLPDKAIDLIDEAGS+VRLR +P +ELE++L ++ KEK+ AV+ Q+FEKA LRD E + ++ ++ KE + G VT DI VS WTG +S K + L L M+K L + +G A + +A R R G K P G+F+F P G KTEL Sbjct: 307 LARGELQCIGATTLDEYRKYIEKDAALERRFQPIQVDEPTLEETIQILNGLRDRYEAHHRVTITDEAIEAAASLSDRYITDRFLPDKAIDLIDEAGSKVRLRSYTVPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDSEQRFREELETTKNQWKE------KQGQTDSEVTMEDIAAVVSTWTGVPVSKLTKDETDRL---LNMEKILHDRV--IGQSEAVNAVAKAIRRARAGL-KDPKRPIGSFIFL-GPTGVGKTEL 557
BLAST of EY665753 vs. ExPASy Swiss-Prot
Match: CLPC_BACSU (Negative regulator of genetic competence clpC/mecB OS=Bacillus subtilis GN=clpC PE=1 SV=1) HSP 1 Score: 221.476 bits (563), Expect = 4.896e-57 Identity = 134/262 (51.15%), Postives = 169/262 (64.50%), Query Frame = 1 Query: 1 LARGELPCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQPFVSAWTGLSG*KKPQLMNLIAFLKMKKTLSQKSYWVGMKLAKV-LNRAFRGDRVGTQKPPFNQFGNFLFFRAPWGGRKTEL 783 LARGEL CIGATTLDEYRK+IEKD ALERRFQP++V +PSVDE+IQIL+GLR+RYE HH++ TD+A+ +A +LS +YISDRFLPDKAIDLIDEAGS+VRLR P +ELE++L ++ KEK+ AV+ Q+FEKA LRD E L+ Q+ KE + G VT DI VS+WTG+ K Q L M+ L + +G A V + +A R R G K P G+F+F P G KTEL Sbjct: 304 LARGELQCIGATTLDEYRKYIEKDAALERRFQPIQVDQPSVDESIQILQGLRDRYEAHHRVSITDDAIEAAVKLSDRYISDRFLPDKAIDLIDEAGSKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREQVEDTKKSWKE------KQGQENSEVTVDDIAMVVSSWTGVPVSKIAQ-TETDKLLNMENILHSRV--IGQDEAVVAVAKAVRRARAGL-KDPKRPIGSFIFL-GPTGVGKTEL 554 The following BLAST results are available for this feature:
BLAST of EY665753 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 194
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665753 ID=EY665753; Name=EY665753; organism=Citrus sinensis; type=EST; length=859bpback to top |