EY665752

Overview
NameEY665752
Unique NameEY665752
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length927
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665752 vs. ExPASy Swiss-Prot
Match: XPO1_RAT (Exportin-1 OS=Rattus norvegicus GN=Xpo1 PE=2 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 3.110e-52
Identity = 98/188 (52.13%), Postives = 134/188 (71.28%), Query Frame = 3
Query:  105 SKTSYVKLLRSVKRETLKLIETFLDKAEDQPQIGKQFVPPMMDPVLGDYARNVPDARESEVLSLFATIINKYKGAMIDDVPRIFEAIFQCTLEMITKNFEDYPEHRLKFFSLLRAIATHCFPALIRLSSQQLKLVMDSIIWAFRHTERNIAETGLNLLLEMLKNFQASEFCNQ-FYRTYFVTIEQEIF 665
            +K   ++ +R+VKRETLKLI  ++ ++ D   + + FVPP++D VL DY RNVP ARE EVLS  A I+NK  G +  ++P+IF+A+F+CTL MI K+FE+YPEHR  FF LL+A+ +HCFPA + +   Q KLV+DSIIWAF+HT RN+A+TGL +L  +L+N    E   Q FY+TYF  I Q IF
Sbjct:  740 TKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVAENFVPPLLDAVLIDYQRNVPAAREPEVLSTMAIIVNKLGGHITAEIPQIFDAVFECTLNMINKDFEEYPEHRTNFFLLLQAVNSHCFPAFLAIPPAQFKLVLDSIIWAFKHTMRNVADTGLQILFTLLQNVAQEEAAAQSFYQTYFCDILQHIF 927          
BLAST of EY665752 vs. ExPASy Swiss-Prot
Match: XPO1_MOUSE (Exportin-1 OS=Mus musculus GN=Xpo1 PE=1 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 3.110e-52
Identity = 98/188 (52.13%), Postives = 134/188 (71.28%), Query Frame = 3
Query:  105 SKTSYVKLLRSVKRETLKLIETFLDKAEDQPQIGKQFVPPMMDPVLGDYARNVPDARESEVLSLFATIINKYKGAMIDDVPRIFEAIFQCTLEMITKNFEDYPEHRLKFFSLLRAIATHCFPALIRLSSQQLKLVMDSIIWAFRHTERNIAETGLNLLLEMLKNFQASEFCNQ-FYRTYFVTIEQEIF 665
            +K   ++ +R+VKRETLKLI  ++ ++ D   + + FVPP++D VL DY RNVP ARE EVLS  A I+NK  G +  ++P+IF+A+F+CTL MI K+FE+YPEHR  FF LL+A+ +HCFPA + +   Q KLV+DSIIWAF+HT RN+A+TGL +L  +L+N    E   Q FY+TYF  I Q IF
Sbjct:  740 TKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVAENFVPPLLDAVLIDYQRNVPAAREPEVLSTMAIIVNKLGGHITAEIPQIFDAVFECTLNMINKDFEEYPEHRTNFFLLLQAVNSHCFPAFLAIPPAQFKLVLDSIIWAFKHTMRNVADTGLQILFTLLQNVAQEEAAAQSFYQTYFCDILQHIF 927          
BLAST of EY665752 vs. ExPASy Swiss-Prot
Match: XPO1_HUMAN (Exportin-1 OS=Homo sapiens GN=XPO1 PE=1 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 3.110e-52
Identity = 98/188 (52.13%), Postives = 134/188 (71.28%), Query Frame = 3
Query:  105 SKTSYVKLLRSVKRETLKLIETFLDKAEDQPQIGKQFVPPMMDPVLGDYARNVPDARESEVLSLFATIINKYKGAMIDDVPRIFEAIFQCTLEMITKNFEDYPEHRLKFFSLLRAIATHCFPALIRLSSQQLKLVMDSIIWAFRHTERNIAETGLNLLLEMLKNFQASEFCNQ-FYRTYFVTIEQEIF 665
            +K   ++ +R+VKRETLKLI  ++ ++ D   + + FVPP++D VL DY RNVP ARE EVLS  A I+NK  G +  ++P+IF+A+F+CTL MI K+FE+YPEHR  FF LL+A+ +HCFPA + +   Q KLV+DSIIWAF+HT RN+A+TGL +L  +L+N    E   Q FY+TYF  I Q IF
Sbjct:  740 TKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVAENFVPPLLDAVLIDYQRNVPAAREPEVLSTMAIIVNKLGGHITAEIPQIFDAVFECTLNMINKDFEEYPEHRTNFFLLLQAVNSHCFPAFLAIPPTQFKLVLDSIIWAFKHTMRNVADTGLQILFTLLQNVAQEEAAAQSFYQTYFCDILQHIF 927          
BLAST of EY665752 vs. ExPASy Swiss-Prot
Match: XPO1_SCHPO (Exportin-1 OS=Schizosaccharomyces pombe GN=xpo1 PE=1 SV=3)

HSP 1 Score: 197.978 bits (502), Expect = 1.360e-50
Identity = 88/189 (46.56%), Postives = 138/189 (73.02%), Query Frame = 3
Query:  102 ASKTSYVKLLRSVKRETLKLIETFLDKAEDQPQIGKQFVPPMMDPVLGDYARNVPDARESEVLSLFATIINKYKGAMIDDVPRIFEAIFQCTLEMITKNFEDYPEHRLKFFSLLRAIATHCFPALIRLSSQQLKLVMDSIIWAFRHTERNIAETGLNLLLEMLKNF--QASEFCNQFYRTYFVTIEQEI 662
            A+KT +V+ LR++K+E LKL++ ++ +AED   +G   +P + + VL DY +NVPDAR++EVL+L  TI+N+    + D +P + +A+F CTLEMI+K+F +YPEHR  FF LLRAI  +CFPAL+ + + Q KLV++SI+W+F+H  R+I ETGLN+LLE++ N      +  N F++TY++++ Q+I
Sbjct:  740 ATKTPHVRGLRTIKKEILKLVDAYISRAEDLELVGNTLIPALFEAVLLDYLQNVPDARDAEVLNLITTIVNQLSELLTDKIPLVLDAVFGCTLEMISKDFSEYPEHRAAFFQLLRAINLNCFPALLNIPAPQFKLVINSIVWSFKHVSRDIQETGLNILLELINNMASMGPDVSNAFFQTYYISLLQDI 928          

HSP 2 Score: 23.8682 bits (50), Expect = 1.360e-50
Identity = 10/13 (76.92%), Postives = 11/13 (84.62%), Query Frame = 1
Query:  670 VLTDTFHKPGFKL 708
            VLTD+ HK GFKL
Sbjct:  931 VLTDSDHKSGFKL 943          
BLAST of EY665752 vs. ExPASy Swiss-Prot
Match: XPO1_DICDI (Exportin-1 OS=Dictyostelium discoideum GN=xpo1 PE=3 SV=2)

HSP 1 Score: 190.274 bits (482), Expect = 1.604e-48
Identity = 89/179 (49.72%), Postives = 131/179 (73.18%), Query Frame = 3
Query:  129 LRSVKRETLKLIETFLDKAEDQPQIGKQFVPPMMDPVLGDYARNVPDARESEVLSLFATIINKYKGAMIDDVPRIFEAIFQCTLEMITKNFEDYPEHRLKFFSLLRAIATHCFPALIRLSSQQLKLVMDSIIWAFRHTERNIAETGLNLLLEMLKNF-QASEFCNQFYRTYFVTIEQEI 662
            +RSVK+ETLKL+ETF++K+ D+  I   F+ P+++ VLGDY  N+P+ R+ EVLSL   II   K  +  +VP+I EA+F+ TL MITKNFEDYP HR+ FF+L+RAI ++ F     L  QQ KL++D ++WAF+HTERNI+ETGL++L E+++N  + S+  N F++TY V++  +I
Sbjct:  734 MRSVKKETLKLLETFIEKSSDKQVIYSNFLQPLLEAVLGDYRTNIPETRDPEVLSLMTAIITSLKQLVHPEVPKILEAVFETTLSMITKNFEDYPYHRINFFNLIRAINSNAFTVFHNLHPQQFKLLIDCVVWAFKHTERNISETGLHILKELIENVSKNSDVANVFFKTYLVSLLNDI 912          

HSP 2 Score: 24.6386 bits (52), Expect = 1.604e-48
Identity = 9/13 (69.23%), Postives = 11/13 (84.62%), Query Frame = 1
Query:  670 VLTDTFHKPGFKL 708
            +LTD+FHK GF L
Sbjct:  915 ILTDSFHKSGFAL 927          
BLAST of EY665752 vs. ExPASy Swiss-Prot
Match: XPO1_DROME (Exportin-1 OS=Drosophila melanogaster GN=emb PE=1 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 3.330e-46
Identity = 86/184 (46.74%), Postives = 127/184 (69.02%), Query Frame = 3
Query:  120 VKLLRSVKRETLKLIETFLDKAEDQPQIGKQFVPPMMDPVLGDYAR-NVPDARESEVLSLFATIINKYKGAMIDDVPRIFEAIFQCTLEMITKNFEDYPEHRLKFFSLLRAIATHCFPALIRLSSQQLKLVMDSIIWAFRHTERNIAETGLNLLLEMLKNF-QASEFCNQFYRTYFVTIEQEIF 665
            +K +  VK+ETL LI  ++ ++ D   +   F+PP++D +L DY R  VP ARE +VLS  A I++K +  + ++VP+IF+A+F+CTL+MI KNFED+P+HRL F+ LL+A+  HCF A + +   Q KLV DS++WAF+HT RN+A+ GLN+L +ML+N  Q       FY+TYF  I  +IF
Sbjct:  737 IKTMHVVKKETLNLISEWVSRSNDNQLVMDNFIPPLLDAILLDYQRCKVPSAREPKVLSAMAIIVHKLRQHITNEVPKIFDAVFECTLDMINKNFEDFPQHRLSFYELLQAVNAHCFKAFLNIPPAQFKLVFDSVVWAFKHTMRNVADMGLNILFKMLQNLDQHPGAAQSFYQTYFTDILMQIF 920          
BLAST of EY665752 vs. ExPASy Swiss-Prot
Match: XPO1_YEAST (Exportin-1 OS=Saccharomyces cerevisiae GN=CRM1 PE=1 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.238e-38
Identity = 76/191 (39.79%), Postives = 120/191 (62.83%), Query Frame = 3
Query:  102 ASKTSYVKLLRSVKRETLKLIETFLDKAEDQPQIGKQFVPPMMDPVLGDYARNVPDARESEVLSLFATIINKYKGAMIDDVPRIFEAIFQCTLEMITKNFEDYPEHRLKFFSLLRAIATHCFPALIRLSSQQLKLVMDSIIWAFRHTERNIAETGLNLLLEMLKNFQAS---EFCNQFYRTYFVTIEQEIF 665
            A+KT  V+ LR++K+E LKL+ET++ KA +   + K  V P+++ VL DY  NVPDAR++EVL+   T++ K    +   V  I +++F+CTL+MI K+F +YPEHR++F+ LL+ I    F A + L     KL +D+I WAF+H  R++   GL + L+++KN +      F N+F++ YF     E F
Sbjct:  750 ATKTPKVRGLRTIKKEILKLVETYISKARNLDDVVKVLVEPLLNAVLEDYMNNVPDARDAEVLNCMTTVVEKVGHMIPQGVILILQSVFECTLDMINKDFTEYPEHRVEFYKLLKVINEKSFAAFLELPPAAFKLFVDAICWAFKHNNRDVEVNGLQIALDLVKNIERMGNVPFANEFHKNYFFIFVSETF 940          

HSP 2 Score: 21.9422 bits (45), Expect = 1.238e-38
Identity = 9/13 (69.23%), Postives = 10/13 (76.92%), Query Frame = 1
Query:  664 FAVLTDTFHKPGF 702
            F VLTD+ HK GF
Sbjct:  940 FFVLTDSDHKSGF 952          
The following BLAST results are available for this feature:
BLAST of EY665752 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
XPO1_RAT3.110e-5252.13Exportin-1 OS=Rattus norvegicus GN=Xpo1 PE=2 SV=1[more]
XPO1_MOUSE3.110e-5252.13Exportin-1 OS=Mus musculus GN=Xpo1 PE=1 SV=1[more]
XPO1_HUMAN3.110e-5252.13Exportin-1 OS=Homo sapiens GN=XPO1 PE=1 SV=1[more]
XPO1_SCHPO1.360e-5046.56Exportin-1 OS=Schizosaccharomyces pombe GN=xpo1 PE... [more]
XPO1_DICDI1.604e-4849.72Exportin-1 OS=Dictyostelium discoideum GN=xpo1 PE=... [more]
XPO1_DROME3.330e-4646.74Exportin-1 OS=Drosophila melanogaster GN=emb PE=1 ... [more]
XPO1_YEAST1.238e-3839.79Exportin-1 OS=Saccharomyces cerevisiae GN=CRM1 PE=... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-102-095-B10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665752 ID=EY665752; Name=EY665752; organism=Citrus sinensis; type=EST; length=927bp
GGGGGGGGAGTGGGGTTTGCGGCACTGCGTACGGTCCGGATTCCGGGTCG
ACCCCGCGTCCGGAGCTTATATCAAGTAGCATCTCTTCAGGAGGGCCTTT
TGCATCTAAAACATCTTATGTGAAACTTCTACGGTCTGTTAAAAGGGAAA
CTCTGAAGCTCATTGAGACATTCCTGGACAAGGCTGAAGATCAGCCGCAG
ATAGGAAAACAGTTTGTTCCCCCAATGATGGATCCTGTCCTTGGTGACTA
TGCTAGGAATGTGCCTGATGCTAGAGAGTCAGAAGTTCTTTCACTTTTTG
CCACAATCATAAACAAGTATAAGGGTGCAATGATAGATGATGTGCCTCGC
ATATTTGAAGCCATTTTCCAATGCACACTGGAGATGATAACCAAAAATTT
TGAAGATTACCCAGAGCATCGTCTCAAGTTCTTTTCTTTGCTTCGTGCCA
TTGCTACTCATTGTTTTCCTGCTCTGATTCGGTTGTCAAGTCAGCAATTA
AAACTAGTCATGGATTCAATCATATGGGCCTTTCGGCATACAGAAAGGAA
TATTGCGGAAACTGGGCTAAATCTTTTATTGGAGATGTTGAAAAACTTTC
AGGCGTCTGAGTTCTGTAACCAATTCTACCGGACATACTTTGTGACAATT
GAGCAAGAAATATTTTGCCGTATTGACCGACACATTTCATAAACCTGGGT
TCAAGTTGCACGTCCCTAGGTCCGGCAGTCATCCTTTGTAGGCAACAAAA
TCCGCCAACCCCTCTCCCTGGTCTTTAGCCTTCACAATCGCCCCATTCAT
CATACCGCGCCGCCATTCAGGAAAAGGGGAAGTCGGTTATCTCACCACCC
CCTTTAGTGACGACTTACAAGGCTCTCTCTAACCTCCCCAGCCGCCAATT
CTGACTGCCGGCCCACCGCTAGTTTCC
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