EL492562
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EL492562 vs. ExPASy Swiss-Prot
Match: RS16_LUPPO (40S ribosomal protein S16 OS=Lupinus polyphyllus GN=RPS16 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 8.716e-15 Identity = 39/39 (100.00%), Postives = 39/39 (100.00%), Query Frame = 1 Query: 13 IRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEI 129 IRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEI Sbjct: 69 IRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEI 107
BLAST of EL492562 vs. ExPASy Swiss-Prot
Match: RS16_GOSHI (40S ribosomal protein S16 OS=Gossypium hirsutum GN=RPS16 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 8.716e-15 Identity = 39/39 (100.00%), Postives = 39/39 (100.00%), Query Frame = 1 Query: 13 IRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEI 129 IRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEI Sbjct: 69 IRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEI 107
BLAST of EL492562 vs. ExPASy Swiss-Prot
Match: RS163_ARATH (40S ribosomal protein S16-3 OS=Arabidopsis thaliana GN=RPS16C PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 9.636e-14 Identity = 36/39 (92.31%), Postives = 38/39 (97.44%), Query Frame = 1 Query: 13 IRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEI 129 IRV GGGHTSQ+YAIRQSIAKALVA+YQKYVDEQSKKEI Sbjct: 70 IRVNGGGHTSQVYAIRQSIAKALVAYYQKYVDEQSKKEI 108
BLAST of EL492562 vs. ExPASy Swiss-Prot
Match: RS161_ARATH (40S ribosomal protein S16-1 OS=Arabidopsis thaliana GN=RPS16A PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 9.636e-14 Identity = 36/39 (92.31%), Postives = 38/39 (97.44%), Query Frame = 1 Query: 13 IRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEI 129 IRV GGGHTSQ+YAIRQSIAKALVA+YQKYVDEQSKKEI Sbjct: 70 IRVNGGGHTSQVYAIRQSIAKALVAYYQKYVDEQSKKEI 108
BLAST of EL492562 vs. ExPASy Swiss-Prot
Match: RS16_TORRU (40S ribosomal protein S16 OS=Tortula ruralis GN=RPS16 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 3.662e-13 Identity = 36/39 (92.31%), Postives = 39/39 (100.00%), Query Frame = 1 Query: 13 IRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEI 129 IRVKGGG+TSQIYAIRQSIAKALVA++QKYVDEQSKKEI Sbjct: 66 IRVKGGGNTSQIYAIRQSIAKALVAYFQKYVDEQSKKEI 104
BLAST of EL492562 vs. ExPASy Swiss-Prot
Match: RS16_FRIAG (40S ribosomal protein S16 OS=Fritillaria agrestis GN=RPS16 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.391e-12 Identity = 34/39 (87.18%), Postives = 38/39 (97.44%), Query Frame = 1 Query: 13 IRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEI 129 IRV+GGG TSQIYAIRQSIAKALVA+YQKYVDEQ+KKE+ Sbjct: 69 IRVRGGGKTSQIYAIRQSIAKALVAYYQKYVDEQAKKEV 107
BLAST of EL492562 vs. ExPASy Swiss-Prot
Match: RS16_RAT (40S ribosomal protein S16 OS=Rattus norvegicus GN=Rps16 PE=1 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 2.373e-12 Identity = 33/39 (84.62%), Postives = 37/39 (94.87%), Query Frame = 1 Query: 13 IRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEI 129 +RVKGGGH +QIYAIRQSI+KALVA+YQKYVDE SKKEI Sbjct: 70 VRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEI 108
BLAST of EL492562 vs. ExPASy Swiss-Prot
Match: RS16_PIG (40S ribosomal protein S16 OS=Sus scrofa GN=RPS16 PE=2 SV=4) HSP 1 Score: 70.8626 bits (172), Expect = 2.373e-12 Identity = 33/39 (84.62%), Postives = 37/39 (94.87%), Query Frame = 1 Query: 13 IRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEI 129 +RVKGGGH +QIYAIRQSI+KALVA+YQKYVDE SKKEI Sbjct: 70 VRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEI 108
BLAST of EL492562 vs. ExPASy Swiss-Prot
Match: RS16_MOUSE (40S ribosomal protein S16 OS=Mus musculus GN=Rps16 PE=2 SV=4) HSP 1 Score: 70.8626 bits (172), Expect = 2.373e-12 Identity = 33/39 (84.62%), Postives = 37/39 (94.87%), Query Frame = 1 Query: 13 IRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEI 129 +RVKGGGH +QIYAIRQSI+KALVA+YQKYVDE SKKEI Sbjct: 70 VRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEI 108
BLAST of EL492562 vs. ExPASy Swiss-Prot
Match: RS16_HUMAN (40S ribosomal protein S16 OS=Homo sapiens GN=RPS16 PE=1 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 2.373e-12 Identity = 33/39 (84.62%), Postives = 37/39 (94.87%), Query Frame = 1 Query: 13 IRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEI 129 +RVKGGGH +QIYAIRQSI+KALVA+YQKYVDE SKKEI Sbjct: 70 VRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEI 108 The following BLAST results are available for this feature:
BLAST of EL492562 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 21
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Sequences
The
following sequences are available for this feature:
EST sequence >EL492562 ID=EL492562; Name=EL492562; organism=Citrus sinensis; type=EST; length=255bpback to top |