EL492560

Overview
NameEL492560
Unique NameEL492560
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length203
Libraries
Library NameType
Citrus sinensis flesh cDNA-AFLP Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EL492560 vs. ExPASy Swiss-Prot
Match: ERG3_ORYSJ (Elicitor-responsive protein 3 OS=Oryza sativa subsp. japonica GN=ERG3 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 4.255e-14
Identity = 39/80 (48.75%), Postives = 52/80 (65.00%), Query Frame = 3 
Query:    6 VLTCRXQEQKSSIGSG-----------------DVTELTLKIMDKDTFSNDDYLGEATISLEPLFMEGSLPPTAYNVVTQ 194
            VL CR QEQKSS+ SG                 + TEL +K+MD D+ ++DD++GEATISLE ++ EGS+PPT YNVV +
Sbjct:   30 VLKCRSQEQKSSVASGKGSDPEWNETFMFSVTHNATELIIKLMDSDSGTDDDFVGEATISLEAIYTEGSIPPTVYNVVKE 109
[Close]
BLAST of EL492560 vs. ExPASy Swiss-Prot
Match: ERG3_ORYSI (Elicitor-responsive protein 3 OS=Oryza sativa subsp. indica GN=ERG3 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 4.255e-14
Identity = 39/80 (48.75%), Postives = 52/80 (65.00%), Query Frame = 3 
Query:    6 VLTCRXQEQKSSIGSG-----------------DVTELTLKIMDKDTFSNDDYLGEATISLEPLFMEGSLPPTAYNVVTQ 194
            VL CR QEQKSS+ SG                 + TEL +K+MD D+ ++DD++GEATISLE ++ EGS+PPT YNVV +
Sbjct:   30 VLKCRSQEQKSSVASGKGSDPEWNETFMFSVTHNATELIIKLMDSDSGTDDDFVGEATISLEAIYTEGSIPPTVYNVVKE 109
[Close]
BLAST of EL492560 vs. ExPASy Swiss-Prot
Match: Y1322_ARATH (C2 domain-containing protein At1g63220 OS=Arabidopsis thaliana GN=At1g63220 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.112e-13
Identity = 40/79 (50.63%), Postives = 48/79 (60.76%), Query Frame = 3 
Query:    3 VVLTCRXQEQKSSIGSG-----------------DVTELTLKIMDKDTFSNDDYLGEATISLEPLFMEGSLPPTAYNVV 188
            V LTCR Q+QKS++  G                   TEL  KI DKD  + DD +GEATI LEP+F+EGS+PPTAYNVV
Sbjct:   29 VQLTCRTQDQKSNVAEGMGTTPEWNETFIFTVSEGTTELKAKIFDKDVGTEDDAVGEATIPLEPVFVEGSIPPTAYNVV 107
The following BLAST results are available for this feature:
BLAST of EL492560 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
ERG3_ORYSJ4.255e-1448.75Elicitor-responsive protein 3 OS=Oryza sativa subs... [more]
ERG3_ORYSI4.255e-1448.75Elicitor-responsive protein 3 OS=Oryza sativa subs... [more]
Y1322_ARATH2.112e-1350.63C2 domain-containing protein At1g63220 OS=Arabidop... [more]
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Properties
Property NameValue
Genbank descriptionC3200 Citrus sinensis flesh cDNA-AFLP Library Citrus sinensis cDNA clone ClC3200, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EL492560 ID=EL492560; Name=EL492560; organism=Citrus sinensis; type=EST; length=203bp
TTGTCGTTCTTACTTGCCGGNCACAGGAGCAGAAAAGCAGTATCGGATCA
GGTGATGTTACGGAACTCACTTTGAAAATCATGGACAAGGATACATTTAG
CAACGACGATTATCTTGGAGAAGCAACCATTTCATTAGAGCCTTTGTTCA
TGGAAGGAAGCCTTCCTCCAACTGCTTACAATGTTGTTACTCAGGGACTC
ATC
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