EY665745

Overview
NameEY665745
Unique NameEY665745
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length932
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665745 vs. ExPASy Swiss-Prot
Match: VPS53_PONAB (Vacuolar protein sorting-associated protein 53 homolog OS=Pongo abelii GN=VPS53 PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 8.598e-34
Identity = 74/169 (43.79%), Postives = 108/169 (63.91%), Query Frame = 1
Query:   43 MFPTEASLSGVGPLMQKIHSEIRRVDAGILAAVRQQSNSGNKAKEDLAAATHAVEELMYKIREIKNKAEQSETMVQEICRDIKKLDFAKKHITTTITALHRLTMLVSAVEQLQVMASKRQYKEAAAQLEAVNQLCSHFEAYRDIPKITELREKFKNIKQILKSHVFSDF 549
            +FPTE SL+ +  ++ KI  +IRR+D  I   VR Q+N G   ++ L  A  A+++L  KI++IK+KAE+SE MV+EI RDIK+LD AK+H+TT+IT L+ L ML   V+ L+ M  +RQY E A  L+ V  +  HF  Y  IP+I +L E+ K  +  L   + +DF
Sbjct:   51 LFPTEQSLANIDEVVNKIRLKIRRLDDNIRTVVRGQTNVGQDGRQALEEAQKAIQQLFGKIKDIKDKAEKSEQMVKEITRDIKQLDHAKRHLTTSITTLNHLHMLAGGVDSLEAMTRRRQYGEVANLLQGVMNVLEHFHKYMGIPQIRQLSERVKAAQTELGQQILADF 219          
BLAST of EY665745 vs. ExPASy Swiss-Prot
Match: VPS53_MOUSE (Vacuolar protein sorting-associated protein 53 homolog OS=Mus musculus GN=Vps53 PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 8.598e-34
Identity = 74/169 (43.79%), Postives = 108/169 (63.91%), Query Frame = 1
Query:   43 MFPTEASLSGVGPLMQKIHSEIRRVDAGILAAVRQQSNSGNKAKEDLAAATHAVEELMYKIREIKNKAEQSETMVQEICRDIKKLDFAKKHITTTITALHRLTMLVSAVEQLQVMASKRQYKEAAAQLEAVNQLCSHFEAYRDIPKITELREKFKNIKQILKSHVFSDF 549
            +FPTE SL+ +  ++ KI  +IRR+D  I   VR Q+N G   ++ L  A  A+++L  KI++IK+KAE+SE MV+EI RDIK+LD AK+H+TT+IT L+ L ML   V+ L+ M  +RQY E A  L+ V  +  HF  Y  IP+I +L E+ K  +  L   + +DF
Sbjct:   51 LFPTEQSLANIDDVVNKIRLKIRRLDDNIRTVVRGQTNVGQDGRQALEEAQKAIQQLFGKIKDIKDKAEKSEQMVKEITRDIKQLDHAKRHLTTSITTLNHLHMLAGGVDSLEAMTRRRQYGEVANLLQGVMNVLEHFHKYMGIPQIRQLSERVKAAQTELGQQILADF 219          
BLAST of EY665745 vs. ExPASy Swiss-Prot
Match: VPS53_HUMAN (Vacuolar protein sorting-associated protein 53 homolog OS=Homo sapiens GN=VPS53 PE=1 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 8.598e-34
Identity = 74/169 (43.79%), Postives = 108/169 (63.91%), Query Frame = 1
Query:   43 MFPTEASLSGVGPLMQKIHSEIRRVDAGILAAVRQQSNSGNKAKEDLAAATHAVEELMYKIREIKNKAEQSETMVQEICRDIKKLDFAKKHITTTITALHRLTMLVSAVEQLQVMASKRQYKEAAAQLEAVNQLCSHFEAYRDIPKITELREKFKNIKQILKSHVFSDF 549
            +FPTE SL+ +  ++ KI  +IRR+D  I   VR Q+N G   ++ L  A  A+++L  KI++IK+KAE+SE MV+EI RDIK+LD AK+H+TT+IT L+ L ML   V+ L+ M  +RQY E A  L+ V  +  HF  Y  IP+I +L E+ K  +  L   + +DF
Sbjct:   51 LFPTEQSLANIDEVVNKIRLKIRRLDDNIRTVVRGQTNVGQDGRQALEEAQKAIQQLFGKIKDIKDKAEKSEQMVKEITRDIKQLDHAKRHLTTSITTLNHLHMLAGGVDSLEAMTRRRQYGEVANLLQGVMNVLEHFHKYMGIPQIRQLSERVKAAQTELGQQILADF 219          
BLAST of EY665745 vs. ExPASy Swiss-Prot
Match: VPS53_CHICK (Vacuolar protein sorting-associated protein 53 homolog OS=Gallus gallus GN=VPS53 PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.915e-33
Identity = 73/169 (43.20%), Postives = 108/169 (63.91%), Query Frame = 1
Query:   43 MFPTEASLSGVGPLMQKIHSEIRRVDAGILAAVRQQSNSGNKAKEDLAAATHAVEELMYKIREIKNKAEQSETMVQEICRDIKKLDFAKKHITTTITALHRLTMLVSAVEQLQVMASKRQYKEAAAQLEAVNQLCSHFEAYRDIPKITELREKFKNIKQILKSHVFSDF 549
            +FPTE SL+ +  ++ KI  +IR++D  I   VR Q+N G   ++ L  A  A+++L  KI++IK+KAE+SE MV+EI RDIK+LD AK+H+TT+IT L+ L ML   V+ L+ M  +RQY E A  L+ V  +  HF  Y  IP+I +L E+ K  +  L   + +DF
Sbjct:   50 LFPTEQSLANIDEVVNKIRLKIRKLDDNIRTVVRGQTNVGQDGRQALEEAQKAIQQLFGKIKDIKDKAEKSEQMVKEITRDIKQLDHAKRHLTTSITTLNHLHMLAGGVDSLEAMTRRRQYGEVANLLQGVVNVLEHFNKYMGIPQIRQLSERVKAAQNELGQQILADF 218          
BLAST of EY665745 vs. ExPASy Swiss-Prot
Match: YNP8_CAEEL (Uncharacterized protein T05G5.8 OS=Caenorhabditis elegans GN=T05G5.8 PE=2 SV=3)

HSP 1 Score: 100.523 bits (249), Expect = 1.424e-20
Identity = 54/172 (31.40%), Postives = 93/172 (54.07%), Query Frame = 1
Query:   40 QMFPTEASLSGVGPLMQKIHSEIRRVDAGILAAVRQQSNSGNKAKEDLAAATHAVEELMYKIREIKNKAEQSETMVQEICRDIKKLDFAKKHITTTITALHRLTMLVSAVEQLQVMASKRQYKEAAAQLEAVNQLCSHFEAYRDIPKITELREKFKNIKQILKSHVFSDFSS 555
            ++FPTE SL+ +  ++  +  EI  +D  +   V   +N   + +E L  A  A+ EL   I  I+ + + S+ +V+E+ RDIK+LD AK+++T +IT LH L +L++ VE L     K+ Y   A QL A+  +   F+AY++  +I  L  +   +K  L   +  D  +
Sbjct:   40 ELFPTEQSLTQLDSIIASVEGEIGELDNELAYLVETNANVSERGEEALKHAQDAMIELEKSIGSIRERTKSSDEIVREMTRDIKQLDIAKRNLTASITTLHHLHILLTGVESLGAWVDKKDYSSIARQLPAILNVLQLFDAYKESDQIANLSGQLDKLKASLTIQLAKDLKN 211          
BLAST of EY665745 vs. ExPASy Swiss-Prot
Match: YDLF_SCHPO (Uncharacterized protein C3A12.15 OS=Schizosaccharomyces pombe GN=SPAC3A12.15 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.601e-14
Identity = 45/179 (25.14%), Postives = 97/179 (54.19%), Query Frame = 1
Query:   31 TRPQMFPTEASLSGVGPLM----QKIHSEIRRVDAGILAAVRQQSNSGNKAKEDLAAATHAVEELMYKIREIKNKAEQSETMVQEICRDIKKLDFAKKHITTTITALHRLTMLVSAVEQLQVMASKRQYKEAAAQLEAVNQLCSHFEAYRDIPKITELREKFKNIKQILKSHVFSDFSS 555
            T  ++ P + +   +G L     +++   ++++DA        + + G K  +DL ++   +  L+ ++  +++ AE +++ + ++  +IK LDFAK+++ T++T L RL MLV+A E+L+ +   +++ EA + ++A  QL + F+ YR + +I  L       ++     VF  F S
Sbjct:   24 TLHELLPEDITYDDLGSLRLSLSERLQESVKKLDANKKTYEDAKLSMGEKM-DDLNSS---IVSLLQELSTLQSVAENTQSSIVQMTSEIKNLDFAKQNLATSMTMLKRLQMLVTAYEKLRTLRQNQKFGEAISLMQATLQLLNFFKKYRSVERIASLSRSISEFQKSFYEQVFDTFQS 198          
The following BLAST results are available for this feature:
BLAST of EY665745 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
VPS53_PONAB8.598e-3443.79Vacuolar protein sorting-associated protein 53 hom... [more]
VPS53_MOUSE8.598e-3443.79Vacuolar protein sorting-associated protein 53 hom... [more]
VPS53_HUMAN8.598e-3443.79Vacuolar protein sorting-associated protein 53 hom... [more]
VPS53_CHICK1.915e-3343.20Vacuolar protein sorting-associated protein 53 hom... [more]
YNP8_CAEEL1.424e-2031.40Uncharacterized protein T05G5.8 OS=Caenorhabditis ... [more]
YDLF_SCHPO2.601e-1425.14Uncharacterized protein C3A12.15 OS=Schizosaccharo... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-102-095-B03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665745 ID=EY665745; Name=EY665745; organism=Citrus sinensis; type=EST; length=932bp
CGCAGGACGGTCGGGATTCCGGGTCGACCCACGCGTCCGCAGATGTTTCC
CACAGAGGCATCTTTATCTGGTGTTGGGCCACTTATGCAAAAAATACATA
GTGAAATTCGTCGAGTGGATGCGGGAATTTTAGCTGCTGTTCGCCAACAG
AGTAATTCAGGAAACAAAGCAAAGGAAGATCTTGCTGCTGCTACTCATGC
TGTGGAGGAACTCATGTATAAGATCCGGGAAATAAAGAACAAAGCTGAAC
AAAGTGAAACAATGGTTCAGGAAATATGCCGTGACATTAAGAAGTTGGAC
TTTGCAAAGAAGCATATAACAACTACTATCACTGCTCTTCATCGCCTTAC
GATGTTAGTATCTGCTGTTGAGCAGCTACAGGTAATGGCTTCAAAAAGAC
AATACAAGGAGGCTGCTGCGCAGCTTGAGGCTGTAAATCAGTTATGTAGT
CATTTTGAAGCCTACAGGGATATTCCAAAGATCACAGAACTCAGGGAGAA
GTTTAAGAATATAAAACAAATACTCAAGTCACATGTGTTCTCTGACTTCT
CAAGCTTAGGTACCTGGCAAAGAGACAGAGGAAAACTAATTTGCTGCAGC
AATTATCGGATGCTTGCTTAGTTGTTGACGCCCCTAGAGCCATCTGTGCG
GGGAAGAGTTGGTAAATAACTTCTGGCAAAAGGGAGCTAACTTCATATGG
AACAAAACTTTCAAAGGAGCTGAATTAACCTAAGTTGGAAAAAAACTGAA
CCAACGATATGGTTGGGATCAAAACGTCCTAATAAAAAACTAATGAAGGA
AAAATTCCAAATTTTTTCCCCCCTTCATGGGCGGGGTCCCTTATCCGGGT
CCAAATTCCCATTTTCTGAAAAAAAAAAAAGGGAAAAAGGCTTGGGGGGG
GGGACTCTTTGGATATTTTTGACCAACAAAAA
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