EY665744

Overview
NameEY665744
Unique NameEY665744
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length873
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665744 vs. ExPASy Swiss-Prot
Match: PDX1_PHAVU (Pyridoxal biosynthesis protein PDX1 OS=Phaseolus vulgaris GN=PDX1 PE=2 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 9.132e-59
Identity = 114/149 (76.51%), Postives = 119/149 (79.87%), Query Frame = 2
Query:   11 HNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXEPVKRAQGIVRGVTHYSDPEVLGEV 457
            HNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVM DIRVLRNMDDDEVFTFAK IAAPYDLVMQTKQLGRLPVVHF            +MMQLGCD            +P KRA+ IV+ VTHYSDPE+L EV
Sbjct:  138 HNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMSDIRVLRNMDDDEVFTFAKSIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAALMMQLGCDGVFVGSGVFKSGDPAKRARAIVQAVTHYSDPEILAEV 286          
BLAST of EY665744 vs. ExPASy Swiss-Prot
Match: PDX1_HEVBR (Probable pyridoxal biosynthesis protein PDX1 OS=Hevea brasiliensis GN=PDX1 PE=2 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 1.010e-57
Identity = 111/149 (74.50%), Postives = 120/149 (80.54%), Query Frame = 2
Query:   11 HNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXEPVKRAQGIVRGVTHYSDPEVLGEV 457
            HNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGN+IEAVRHVRSVMGDIR+LRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVV F            +MMQLGCD            +P +RA+ IV+ VTHYSDP++L EV
Sbjct:  135 HNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNVIEAVRHVRSVMGDIRLLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVQFAAGGVATPADAALMMQLGCDGVFVGSGVFKSGDPARRARAIVQAVTHYSDPDMLAEV 283          
BLAST of EY665744 vs. ExPASy Swiss-Prot
Match: PDX13_ARATH (Pyridoxal biosynthesis protein PDX1.3 OS=Arabidopsis thaliana GN=PDX13 PE=1 SV=2)

HSP 1 Score: 221.861 bits (564), Expect = 3.837e-57
Identity = 112/149 (75.17%), Postives = 119/149 (79.87%), Query Frame = 2
Query:   11 HNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXEPVKRAQGIVRGVTHYSDPEVLGEV 457
            HNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSV GDIRVLRNMDDDEVFTFAKK+AAPYDLVMQTKQLGRLPVV F            +MMQLGCD            +P +RA+ IV+ VTHYSDPE+L EV
Sbjct:  135 HNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVNGDIRVLRNMDDDEVFTFAKKLAAPYDLVMQTKQLGRLPVVQFAAGGVATPADAALMMQLGCDGVFVGSGIFKSGDPARRARAIVQAVTHYSDPEMLVEV 283          
BLAST of EY665744 vs. ExPASy Swiss-Prot
Match: PDX11_ORYSJ (Probable pyridoxal biosynthesis protein PDX1.1 OS=Oryza sativa subsp. japonica GN=PDX11 PE=2 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 9.450e-56
Identity = 105/149 (70.47%), Postives = 119/149 (79.87%), Query Frame = 2
Query:   11 HNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXEPVKRAQGIVRGVTHYSDPEVLGEV 457
            HNFR+PFVCGCR+LGEALRRIREGAAMIRTKGEAGTGN++EAVRHVRSVMGDIR LRNMDDDEVF++AK+IAAPYDLVMQTKQLGRLPVV F            +MMQLGCD            +P +RA+ IV+ VTHYSDP++L EV
Sbjct:  144 HNFRVPFVCGCRDLGEALRRIREGAAMIRTKGEAGTGNVVEAVRHVRSVMGDIRALRNMDDDEVFSYAKRIAAPYDLVMQTKQLGRLPVVQFAAGGVATPADAALMMQLGCDGVFVGSGIFKSGDPARRARAIVQAVTHYSDPKILAEV 292          
BLAST of EY665744 vs. ExPASy Swiss-Prot
Match: PDX12_ORYSJ (Probable pyridoxal biosynthesis protein PDX1.2 OS=Oryza sativa subsp. japonica GN=PDX12 PE=2 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 6.772e-54
Identity = 103/149 (69.13%), Postives = 118/149 (79.19%), Query Frame = 2
Query:   11 HNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXEPVKRAQGIVRGVTHYSDPEVLGEV 457
            +NFR+PFVCGCR+LGEALRRIREGAAMIRTKGEAGTGN++EAVRHVRSVMGDIR LR+MDDDEVF++AK+IAAPYDLVMQTKQLGRLPVV F            +MMQLGCD            +P  RA+ IV+ VTHYSDP++L EV
Sbjct:  137 NNFRVPFVCGCRDLGEALRRIREGAAMIRTKGEAGTGNVVEAVRHVRSVMGDIRALRSMDDDEVFSYAKRIAAPYDLVMQTKQLGRLPVVQFAAGGVATPADAALMMQLGCDGVFVGSGIFKSGDPALRARAIVQAVTHYSDPKILAEV 285          
BLAST of EY665744 vs. ExPASy Swiss-Prot
Match: PDX1_GINBI (Probable pyridoxal biosynthesis protein PDX1 OS=Ginkgo biloba GN=PDX1 PE=2 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.668e-52
Identity = 101/149 (67.79%), Postives = 116/149 (77.85%), Query Frame = 2
Query:   11 HNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXEPVKRAQGIVRGVTHYSDPEVLGEV 457
            HNFRIPFVCGCRNLGEALRRI EGAAMIRTKGEAGTGN+IEAVRHVRSV+GDIR L+++DDDEVF FAK+IAAPY+LV QTKQLGRLPVV+F            +MMQLGCD            +P +RA+ IV+ VTHY+DP +L EV
Sbjct:  135 HNFRIPFVCGCRNLGEALRRIAEGAAMIRTKGEAGTGNVIEAVRHVRSVLGDIRKLQSLDDDEVFAFAKQIAAPYELVRQTKQLGRLPVVNFAAGGVATPADAALMMQLGCDGVFVGSGVFKSGDPARRARAIVQAVTHYNDPHILAEV 283          
BLAST of EY665744 vs. ExPASy Swiss-Prot
Match: PDX11_ARATH (Pyridoxal biosynthesis protein PDX1.1 OS=Arabidopsis thaliana GN=PDX11 PE=1 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 2.845e-52
Identity = 103/149 (69.13%), Postives = 116/149 (77.85%), Query Frame = 2
Query:   11 HNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXEPVKRAQGIVRGVTHYSDPEVLGEV 457
            HNF+IPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGN++EAVRHVRSV G IR+LR+MDDDEVFT+AKKIAAPYDLV+QTK+LGRLPVV F            +MMQLGCD            +PVKRA+ IV+ VT+Y D  VL EV
Sbjct:  136 HNFKIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNVVEAVRHVRSVNGAIRLLRSMDDDEVFTYAKKIAAPYDLVVQTKELGRLPVVQFAAGGVATPADAALMMQLGCDGVFVGSGVFKSGDPVKRAKAIVQAVTNYRDAAVLAEV 284          
BLAST of EY665744 vs. ExPASy Swiss-Prot
Match: PDX12_ARATH (Probable pyridoxal biosynthesis protein PDX1.2 OS=Arabidopsis thaliana GN=PDX12 PE=1 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 7.505e-45
Identity = 89/150 (59.33%), Postives = 108/150 (72.00%), Query Frame = 2
Query:   11 HNFRIPFVCGCRNLGEALRRIREGAAMIRTKGE-AGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXEPVKRAQGIVRGVTHYSDPEVLGEV 457
            HNFR PF+CGCR+ GEALRRIREGAAMIR +G+   TGNI E V++VRS+MG++RVL NMDDDEVFTFAKKI+APYDLV QTKQ+GR+PVV F            +MMQLGCD            +P K+ + IV+ V HY+DP VL E+
Sbjct:  139 HNFRSPFICGCRDTGEALRRIREGAAMIRIQGDLTATGNIAETVKNVRSLMGEVRVLNNMDDDEVFTFAKKISAPYDLVAQTKQMGRVPVVQFASGGITTPADAALMMQLGCDGVFVGSEVFDGPDPFKKLRSIVQAVQHYNDPHVLAEM 288          
BLAST of EY665744 vs. ExPASy Swiss-Prot
Match: PDXS_ROSS1 (Pyridoxal biosynthesis lyase pdxS OS=Roseiflexus sp. (strain RS-1) GN=pdxS PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.849e-43
Identity = 85/168 (50.60%), Postives = 111/168 (66.07%), Query Frame = 2
Query:   11 HNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXEPVKRAQGIVRGVTHYSDPEVLGEVEPAGCATPWGLLFLSAPND 514
            H FR+PFVCGCRNLGEALRR+ EGAAM+RTKGEAGTGN++EAVRH R+V  +IR L++MD+DE+FT+AK I APY+LV Q  + GRLPVV+F            ++MQLG D            +P +RA+ IV   THY++PE++ EV         G+     P+D
Sbjct:  118 HKFRVPFVCGCRNLGEALRRVAEGAAMLRTKGEAGTGNVVEAVRHARAVYSEIRRLQSMDEDELFTYAKNIQAPYELVRQVAETGRLPVVNFAAGGIATPADAALLMQLGVDGVFVGSGIFKSGDPARRARAIVAATTHYNEPEIIAEVSRGLGEAMVGIEISKIPHD 285          
BLAST of EY665744 vs. ExPASy Swiss-Prot
Match: PDXS_CHLSY (Pyridoxal biosynthesis lyase pdxS OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN=pdxS PE=3 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 2.414e-43
Identity = 83/149 (55.70%), Postives = 107/149 (71.81%), Query Frame = 2
Query:   11 HNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXEPVKRAQGIVRGVTHYSDPEVLGEV 457
            H FR+PFVCGCRNLGEALRR+ EGAAM+RTKGEAGTGN++EAVRH R+V  +IR L++M++DE+FT+AK+I APY+LV Q    G+LPVV+F            ++MQLG D            +PVKRA+ IV   THY+DPE++ EV
Sbjct:  118 HKFRVPFVCGCRNLGEALRRVAEGAAMLRTKGEAGTGNVVEAVRHARAVYSEIRRLQSMNEDELFTYAKQIQAPYELVKQVATEGKLPVVNFAAGGIATPADAALLMQLGVDGIFVGSGIFKSGDPVKRARAIVEATTHYNDPEIIAEV 266          
The following BLAST results are available for this feature:
BLAST of EY665744 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 207
Match NameE-valueIdentityDescription
PDX1_PHAVU9.132e-5976.51Pyridoxal biosynthesis protein PDX1 OS=Phaseolus v... [more]
PDX1_HEVBR1.010e-5774.50Probable pyridoxal biosynthesis protein PDX1 OS=He... [more]
PDX13_ARATH3.837e-5775.17Pyridoxal biosynthesis protein PDX1.3 OS=Arabidops... [more]
PDX11_ORYSJ9.450e-5670.47Probable pyridoxal biosynthesis protein PDX1.1 OS=... [more]
PDX12_ORYSJ6.772e-5469.13Probable pyridoxal biosynthesis protein PDX1.2 OS=... [more]
PDX1_GINBI1.668e-5267.79Probable pyridoxal biosynthesis protein PDX1 OS=Gi... [more]
PDX11_ARATH2.845e-5269.13Pyridoxal biosynthesis protein PDX1.1 OS=Arabidops... [more]
PDX12_ARATH7.505e-4559.33Probable pyridoxal biosynthesis protein PDX1.2 OS=... [more]
PDXS_ROSS11.849e-4350.60Pyridoxal biosynthesis lyase pdxS OS=Roseiflexus s... [more]
PDXS_CHLSY2.414e-4355.70Pyridoxal biosynthesis lyase pdxS OS=Chloroflexus ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-095-B02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665744 ID=EY665744; Name=EY665744; organism=Citrus sinensis; type=EST; length=873bp
CCCGCGTCCGCACAACTTTCGTATCCCCTTCGTATGCGGCTGCCGGAACT
TGGGGGAAGCTTTGAGGAGGATTCGCGAAGGCGCGGCGATGATAAGAACG
AAGGGCGAGGCCGGAACGGGGAATATTATCGAAGCGGTGAGGCACGTGCG
GTCTGTGATGGGGGATATTAGGGTTCTGAGGAACATGGACGATGACGAGG
TGTTCACTTTCGCAAAGAAGATAGCGGCGCCGTACGACTTGGTGATGCAG
ACGAAGCAGCTGGGGCGGTTGCCGGTGGTGCACTTCGCAGCGGGAGGAGT
GGCGACGCCGGCGGATGCAGCGATGATGATGCAACTTGGATGCGACGGAG
TGTTTGTCGGGTCGGGCGTGTTTAAGAGCGGGGAACCGGTGAAGCGGGCC
CAGGGAATTGTACGGGGGGTGACTCATTACAGTGACCCGGAGGTGTTGGG
GGAGGTGGAACCTGCCGGTTGCGCGACGCCCTGGGGGCTCTTATTTCTCA
GCGCACCCAACGATGCAGAAGTCCCACATCCCTCTCACACAAAATCATAC
TAAGACCATCCACAACCCCCTTATATGCACTATTATACTTTCCGACACCC
CTATTCCCGTACGCAAACTGTGATCGCCCCGGATACGCCCGCGCCTTCTG
CCCGACATTCGGGGCACCCCCCAGCTCCCCACCGCTCTGTCGCTTTTCTA
CTTTGTTGCTCGTGCCTTCTCCTAATTTGCCCCTCGTCCTCCATCTTCAT
CTCTGCCCCCTATTCTGTTCCTGCCACATGCGTCATCTGCACACGTCAGC
ATCTGTACCTTTGATCTGCACATAAAGACACGTCTACGAAGCGGGAAATT
TTCCTCATGTTTCCTCGCCCCAG
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