CN186295

Overview
NameCN186295
Unique NameCN186295
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length795
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN186295 vs. ExPASy Swiss-Prot
Match: MPK13_ARATH (Mitogen-activated protein kinase 13 OS=Arabidopsis thaliana GN=MPK13 PE=1 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 2.526e-57
Identity = 103/134 (76.87%), Postives = 124/134 (92.54%), Query Frame = -3
Query:  392 IMQRDTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSLHEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNF 793
            I++R+TLFPGKDYVQQL +ITELLGSPDDSDL FLRSDNAR+YVKQLPHV KQ F +KFPN+SP+A+DLAE+MLVFDP+KRITV+EAL  PYL+SLHEINEEPTCP PF+FDFE+T+++E+DIKEL+ RE L+F
Sbjct:  227 ILRRETLFPGKDYVQQLKLITELLGSPDDSDLDFLRSDNARKYVKQLPHVQKQSFREKFPNISPMALDLAEKMLVFDPSKRITVDEALKQPYLASLHEINEEPTCPTPFSFDFEETALDEQDIKELVWRESLHF 360          
BLAST of CN186295 vs. ExPASy Swiss-Prot
Match: NTF6_TOBAC (Mitogen-activated protein kinase homolog NTF6 OS=Nicotiana tabacum GN=NTF6 PE=2 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.810e-55
Identity = 101/139 (72.66%), Postives = 120/139 (86.33%), Query Frame = -3
Query:  377 IMQRDTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSLHEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHPDHM 793
            +++R+ LFPG+DY QQL +I  LLGSP+DSDLGFLRSDNAR+YVK LP VP+ PFSQKFP++SP+A+DLAERMLVFDPAKRITVE+ALNHP+L SLHEINEEP C  PFNFDFEQ S++E+DIKELI  E L F P+ M
Sbjct:  232 LIKREPLFPGRDYAQQLGLIIALLGSPEDSDLGFLRSDNARKYVKHLPRVPRHPFSQKFPDVSPLALDLAERMLVFDPAKRITVEDALNHPFLISLHEINEEPVCDSPFNFDFEQASLSEDDIKELIWNEALKFDPNTM 370          
BLAST of CN186295 vs. ExPASy Swiss-Prot
Match: MPK6_ORYSJ (Mitogen-activated protein kinase 6 OS=Oryza sativa subsp. japonica GN=MPK6 PE=2 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 3.196e-52
Identity = 97/137 (70.80%), Postives = 115/137 (83.94%), Query Frame = -3
Query:  383 IMQRDTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSLHEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHPD 793
            I+ R  LFPG+DY+QQL +ITEL+GSPDDS LGFLRSDNARRY+KQLP  P+Q F  +F NMS  A+DL E+MLVFDP++RITV+EAL+HPYL+SLH+INEEPTCP PF+FDFEQ S  EE IKELI RE L F+PD
Sbjct:  237 IVTRQPLFPGRDYIQQLKLITELIGSPDDSSLGFLRSDNARRYMKQLPQYPRQDFRLRFRNMSAGAVDLLEKMLVFDPSRRITVDEALHHPYLASLHDINEEPTCPAPFSFDFEQPSFTEEHIKELIWRESLAFNPD 373          
BLAST of CN186295 vs. ExPASy Swiss-Prot
Match: MPK2_ORYSJ (Mitogen-activated protein kinase 2 OS=Oryza sativa subsp. japonica GN=MPK2 PE=2 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 9.298e-52
Identity = 97/137 (70.80%), Postives = 113/137 (82.48%), Query Frame = -3
Query:  383 IMQRDTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSLHEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHPD 793
            I+ R+ LFPGKDYV QL +ITEL+GSPDDS LGFLRSDNARRYV+ LP  PKQ F  +FP MS  A+DL ERMLVFDP+KRITV+EAL HPYL+SLHEI +EP CP PF+FDFEQ S+ EEDIKE+I RE L F+P+
Sbjct:  255 IVTREPLFPGKDYVHQLRLITELIGSPDDSSLGFLRSDNARRYVRSLPQYPKQQFRARFPTMSSGAMDLLERMLVFDPSKRITVDEALCHPYLASLHEIYDEPVCPAPFSFDFEQPSLTEEDIKEIIWREALKFNPE 391          
BLAST of CN186295 vs. ExPASy Swiss-Prot
Match: MPK4_ARATH (Mitogen-activated protein kinase 4 OS=Arabidopsis thaliana GN=MPK4 PE=1 SV=2)

HSP 1 Score: 201.06 bits (510), Expect = 6.027e-51
Identity = 94/135 (69.63%), Postives = 113/135 (83.70%), Query Frame = -3
Query:  386 MQRDTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSLHEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHP 790
            M R+ LFPGKDYV QL +ITEL+GSPDDS LGFLRSDNARRYV+QLP  P+Q F+ +FPNMS  A+DL E+MLVFDP++RITV+EAL HPYL+ LH+INEEP C  PFNFDFEQ ++ EE+IKELI RE + F+P
Sbjct:  238 MTREPLFPGKDYVHQLRLITELIGSPDDSSLGFLRSDNARRYVRQLPQYPRQNFAARFPNMSAGAVDLLEKMLVFDPSRRITVDEALCHPYLAPLHDINEEPVCVRPFNFDFEQPTLTEENIKELIYRETVKFNP 372          
BLAST of CN186295 vs. ExPASy Swiss-Prot
Match: MPK11_ARATH (Mitogen-activated protein kinase 11 OS=Arabidopsis thaliana GN=MPK11 PE=1 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 2.290e-50
Identity = 94/136 (69.12%), Postives = 113/136 (83.09%), Query Frame = -3
Query:  386 IMQRDTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSLHEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHP 793
            IM R+ LFPG+DYVQQL +ITEL+GSPDDS LGFLRSDNARRYV+QLP  P+Q F+ +FPNMS  A+DL ++MLVFDP +RITV+EAL HPYL+ LHE NEEP C  PF+FDFEQ S+ EE+IKELI RE + F+P
Sbjct:  234 IMTREPLFPGRDYVQQLRLITELIGSPDDSSLGFLRSDNARRYVRQLPQYPRQNFAARFPNMSVNAVDLLQKMLVFDPNRRITVDEALCHPYLAPLHEYNEEPVCVRPFHFDFEQPSLTEENIKELIYRESVKFNP 369          
BLAST of CN186295 vs. ExPASy Swiss-Prot
Match: MMK2_MEDSA (Mitogen-activated protein kinase homolog MMK2 OS=Medicago sativa GN=MMK2 PE=2 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 6.663e-50
Identity = 90/137 (65.69%), Postives = 112/137 (81.75%), Query Frame = -3
Query:  383 IMQRDTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSLHEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHPD 793
            I+ R  LFPG+DYV QL ++TEL+GSPDD+ LGFLRS+NARRYV+QLP  PKQ FS +FPNMSP A+DL E+ML+FDP+KRI V+EAL HPY++ LH+INEEP C  PF+FDFE+    EEDIKELI +E + F+PD
Sbjct:  231 IVTRQPLFPGRDYVHQLRLVTELIGSPDDASLGFLRSENARRYVRQLPQYPKQNFSARFPNMSPGAVDLLEKMLIFDPSKRIKVDEALCHPYMAPLHDINEEPVCARPFSFDFEEPMFTEEDIKELIWKESVRFNPD 367          
BLAST of CN186295 vs. ExPASy Swiss-Prot
Match: MPK12_ARATH (Mitogen-activated protein kinase 12 OS=Arabidopsis thaliana GN=MPK12 PE=1 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.620e-46
Identity = 89/138 (64.49%), Postives = 105/138 (76.09%), Query Frame = -3
Query:  380 IMQRDTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSLHEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHPDH 793
            IM    LFPGKDYV QL +ITEL+GSPD+S LGFLRSDNARRYV+QLP  PKQ F+ +FP M   AIDL ERMLVFDP +RI+V+EAL H YLS  H++ +EP C  PF+FDFE  S  EE IKELI +E + F+PDH
Sbjct:  235 IMTGQPLFPGKDYVHQLRLITELVGSPDNSSLGFLRSDNARRYVRQLPRYPKQQFAARFPKMPTTAIDLLERMLVFDPNRRISVDEALGHAYLSPHHDVAKEPVCSTPFSFDFEHPSCTEEHIKELIYKESVKFNPDH 372          
BLAST of CN186295 vs. ExPASy Swiss-Prot
Match: MPK5_ARATH (Mitogen-activated protein kinase 5 OS=Arabidopsis thaliana GN=MPK5 PE=2 SV=2)

HSP 1 Score: 177.563 bits (449), Expect = 7.136e-44
Identity = 85/136 (62.50%), Postives = 106/136 (77.94%), Query Frame = -3
Query:  386 IMQRDTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSLHEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHP 793
            IM R+ LFPGKDYV QL +ITEL+GSPD + L FLRS NAR+YVK+LP  P+Q FS +FP+M+  AIDL E+MLVFDP KRITVEEAL +PYLS+LH++N+EP C   F+F FE  S  EE+IKEL+  E + F+P
Sbjct:  237 IMTREPLFPGKDYVHQLKLITELIGSPDGASLEFLRSANARKYVKELPKFPRQNFSARFPSMNSTAIDLLEKMLVFDPVKRITVEEALCYPYLSALHDLNDEPVCSNHFSFHFEDPSSTEEEIKELVWLESVKFNP 372          
BLAST of CN186295 vs. ExPASy Swiss-Prot
Match: MMK1_MEDSA (Mitogen-activated protein kinase homolog MMK1 OS=Medicago sativa GN=MMK1 PE=1 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.346e-42
Identity = 79/138 (57.25%), Postives = 109/138 (78.99%), Query Frame = -3
Query:  380 IMQRDTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSLHEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHPDH 793
            +M R  LFPG+D+V QL ++ EL+G+P + DLGFL ++NA+RY++QLP   +Q F +KFP++ P AIDL E+ML FDP KRITVE+AL HPYL+SLH+I++EP C  PF+FDFEQ ++ EE +KELI RE L F+P++
Sbjct:  249 LMDRKPLFPGRDHVHQLRLLMELIGTPSEDDLGFL-NENAKRYIRQLPPYRRQSFQEKFPHVHPEAIDLVEKMLTFDPRKRITVEDALAHPYLTSLHDISDEPVCMTPFSFDFEQHALTEEQMKELIYREALAFNPEY 385          
The following BLAST results are available for this feature:
BLAST of CN186295 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 169
Match NameE-valueIdentityDescription
MPK13_ARATH2.526e-5776.87Mitogen-activated protein kinase 13 OS=Arabidopsis... [more]
NTF6_TOBAC1.810e-5572.66Mitogen-activated protein kinase homolog NTF6 OS=N... [more]
MPK6_ORYSJ3.196e-5270.80Mitogen-activated protein kinase 6 OS=Oryza sativa... [more]
MPK2_ORYSJ9.298e-5270.80Mitogen-activated protein kinase 2 OS=Oryza sativa... [more]
MPK4_ARATH6.027e-5169.63Mitogen-activated protein kinase 4 OS=Arabidopsis ... [more]
MPK11_ARATH2.290e-5069.12Mitogen-activated protein kinase 11 OS=Arabidopsis... [more]
MMK2_MEDSA6.663e-5065.69Mitogen-activated protein kinase homolog MMK2 OS=M... [more]
MPK12_ARATH2.620e-4664.49Mitogen-activated protein kinase 12 OS=Arabidopsis... [more]
MPK5_ARATH7.136e-4462.50Mitogen-activated protein kinase 5 OS=Arabidopsis ... [more]
MMK1_MEDSA1.346e-4257.25Mitogen-activated protein kinase homolog MMK1 OS=M... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002K21_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002K21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186295 ID=CN186295; Name=CN186295; organism=Citrus sinensis; type=EST; length=795bp
TTTTTTTTTTTTTTTTATCTCGATTATTACTTTCTTCTTCTGTTTCGATA
AAATTGAATTTACACTATACAAACACATCCAAACCAAAGGAGGCTAGGAG
CAAACGGCCTTCTTTTATAAGTCCCAAATTACAAACCCCAACTGGGAACT
TCACTGTTGAAATTAACTAATCCGGTAACTTGTATTATATGATAAACTGC
CATAAAGCCATTCCACCCTACTAAAATCAGAAGGGAGAACCTATCTCCCA
AATTTTCTGCTTATGCAGAGTTCCCTAATTGCATACGACATACATGCTAG
CTTTGCAAACCATAATCAACCTTGACATCACTCCAATGAACCGATCAACG
GAAACAAAGGTCAAAGATTACTCGAGCATGTGATCTGGGTGGAAGTTCAA
ACACTCTCTCAATATGAGCTCCTTTATATCTTCTTCATTCATGGATGTCT
GTTCAAAATCAAAGTTGAAAGGATACGGACAGGTAGGCTCCTCATTGATC
TCATGAAGACTTGATAGATATGGATGGTTTAATGCTTCCTCCACTGTTAT
GCGTTTGGCCGGATCGAAAACTAGCATTCTCTCTGCAAGGTCAATTGCCA
CGGGAGACATATTGGGGAACTTCTGAGAAAAGGGTTGCTTGGGGACATGT
GGAAGCTGCTTAACATATCTCCGGGCATTATCACTTCTTAGGAATCCAAG
ATCTGAATCATCCGGTGAACCTAATAGCTCAGTTATCATTGTCAACTGTT
GAACGTAGTCTTTACCAGGAAAAAGAGTATCCCTTTGCATAATCT
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