CN186285
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186285 vs. ExPASy Swiss-Prot
Match: BH028_ARATH (Transcription factor bHLH28 OS=Arabidopsis thaliana GN=BHLH28 PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 6.376e-26 Identity = 91/260 (35.00%), Postives = 125/260 (48.08%), Query Frame = 2 Query: 5 FAIGDGSVL-GRVPFSGDYVWLTGDHELQLYECERVKEARMHGIQTLVCVSTACGVVELGSSDLIKEDWSLVQLAKSLFGPVIATMLTKQVNLNSES-QLQLXXXXXXXXXXXXXVAPLLDIGMFSGAGAPXXXXXXXQKEWSLEENSKQQT--REVSGEVIKKEQLAAGFXXXXXXXXXXXXXXHFVSGFTDI--NVTSKKRGRKPTSGRESPLNHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKE 766 ++ G+GS L G+ S + V +TG + C+R K+ G+QT++C+ + GV+EL S++ I+ + L + LFG + + N NSE QL G P Q ++L ++ T R G+V+ + + V T + KKRGRKP GR+ PLNHVEAER RRE+LNHRFYALR+VVPNVSKMDK SLL DAV YI E Sbjct: 147 WSFGNGSGLAGKAFASYNPVLVTGSDLIYGSGCDRAKQGGDVGLQTILCIPSHNGVLELASTEEIRPNSDLFNRIRFLFGG--SKYFSGAPNSNSELFPFQLESSCSSTV-----------------TGNPNPSPVYLQNRYNLNFSTSSSTLARAPCGDVLSFGENVKQSFENRNPNTYSDQIQNVVPHATVMLEKKKGKKRGRKPAHGRDKPLNHVEAERMRREKLNHRFYALRAVVPNVSKMDKTSLLEDAVCYINE 387
BLAST of CN186285 vs. ExPASy Swiss-Prot
Match: AIB_ARATH (Transcription factor ABA-INDUCIBLE bHLH-TYPE OS=Arabidopsis thaliana GN=AIB PE=2 SV=2) HSP 1 Score: 107.457 bits (267), Expect = 8.618e-23 Identity = 50/60 (83.33%), Postives = 56/60 (93.33%), Query Frame = 2 Query: 587 KKRGRKPTSGRESPLNHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKE 766 +KRGRKP +GRE PLNHVEAERQRRE+LN RFYALRSVVPN+SKMDKASLL DA++YIKE Sbjct: 380 RKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAISYIKE 439
BLAST of CN186285 vs. ExPASy Swiss-Prot
Match: RAP1_ARATH (Transcription factor MYC2 OS=Arabidopsis thaliana GN=RAP1 PE=1 SV=2) HSP 1 Score: 107.071 bits (266), Expect = 1.126e-22 Identity = 51/60 (85.00%), Postives = 55/60 (91.67%), Query Frame = 2 Query: 587 KKRGRKPTSGRESPLNHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKE 766 KKRGRKP +GRE PLNHVEAERQRRE+LN RFYALR+VVPNVSKMDKASLL DA+AYI E Sbjct: 437 KKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAYINE 496
BLAST of CN186285 vs. ExPASy Swiss-Prot
Match: BH004_ARATH (Transcription factor MYC4 OS=Arabidopsis thaliana GN=BHLH4 PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.244e-21 Identity = 48/60 (80.00%), Postives = 55/60 (91.67%), Query Frame = 2 Query: 587 KKRGRKPTSGRESPLNHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKE 766 +KRGRKP +GRE PLNHVEAERQRRE+LN RFY+LR+VVPNVSKMDKASLL DA++YI E Sbjct: 401 RKRGRKPANGREEPLNHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYISE 460
BLAST of CN186285 vs. ExPASy Swiss-Prot
Match: ATR2_ARATH (Transcription factor ATR2 OS=Arabidopsis thaliana GN=ATR2 PE=1 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.244e-21 Identity = 48/60 (80.00%), Postives = 55/60 (91.67%), Query Frame = 2 Query: 587 KKRGRKPTSGRESPLNHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKE 766 +KRGRKP +GRE PLNHVEAERQRRE+LN RFY+LR+VVPNVSKMDKASLL DA++YI E Sbjct: 400 RKRGRKPANGREEPLNHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYINE 459
BLAST of CN186285 vs. ExPASy Swiss-Prot
Match: BH003_ARATH (Transcription factor bHLH3 OS=Arabidopsis thaliana GN=BHLH3 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 8.066e-21 Identity = 47/60 (78.33%), Postives = 54/60 (90.00%), Query Frame = 2 Query: 587 KKRGRKPTSGRESPLNHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKE 766 +KRGRKP +GRE LNHVEAERQRRE+LN RFYALR+VVPN+SKMDKASLLADA+ YI + Sbjct: 305 RKRGRKPANGREEALNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLADAITYITD 364
BLAST of CN186285 vs. ExPASy Swiss-Prot
Match: BH013_ARATH (Transcription factor bHLH13 OS=Arabidopsis thaliana GN=BHLH13 PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.797e-20 Identity = 48/64 (75.00%), Postives = 54/64 (84.38%), Query Frame = 2 Query: 575 NVTSKKRGRKPTSGRESPLNHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKE 766 N +KRGR+P +GR LNHVEAERQRRE+LN RFYALRSVVPN+SKMDKASLL DAV+YI E Sbjct: 414 NNRPRKRGRRPANGRAEALNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAVSYINE 477
BLAST of CN186285 vs. ExPASy Swiss-Prot
Match: BH014_ARATH (Transcription factor bHLH14 OS=Arabidopsis thaliana GN=BHLH14 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 9.550e-14 Identity = 35/45 (77.78%), Postives = 44/45 (97.78%), Query Frame = 2 Query: 629 LNHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIK 763 L+HVEAE+QRRE+LNHRFYALR++VP VS+MDKASLL+DAV+YI+ Sbjct: 248 LSHVEAEKQRREKLNHRFYALRAIVPKVSRMDKASLLSDAVSYIE 292 The following BLAST results are available for this feature:
BLAST of CN186285 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN186285 ID=CN186285; Name=CN186285; organism=Citrus sinensis; type=EST; length=766bpback to top |