CN186277
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186277 vs. ExPASy Swiss-Prot
Match: CUL3A_XENLA (Cullin-3-A OS=Xenopus laevis GN=cul3a PE=1 SV=1) HSP 1 Score: 232.261 bits (591), Expect = 2.556e-60 Identity = 129/247 (52.23%), Postives = 170/247 (68.83%), Query Frame = -2 Query: 132 CNLPAEMSALCEKFRSYYLGTHTGRRLSWQTNMGSADIKATF------------GKG---------QKHELNVSTYQMCVLMLFNNADRLSYREIEQATEIPASDLKRCLQSLACVRG-KNVLRKEPMSKDIGEDDAFFVNDKFTSKFYKVKIGTVVA-QKESEPEKQETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNNIIAEVTKQLQSRFLANPTEIKKRIESLIERDFLERDNVDRKLYRYLA 803 CN+P E FR +YL H+GR+L+ Q +MGSAD+ ATF G G +KH L VST+QM +LMLFNN D+ ++ EI+Q T+IP +L R LQSLAC + + VL KEP SK+I F VND+FTSK ++VKI TV A Q ES+PE++ETRQ+V++DRK +IEAAIVRIMKSR+ + HN ++AEVT+QL++RFL +P IKKRIE LIER++L R DRK+Y Y+A Sbjct: 522 CNIPPAPRHAFEIFRRFYLAKHSGRQLTLQHHMGSADLNATFYGPVKKEDGSEVGVGGAQVTGSNTRKHILQVSTFQMTILMLFNNRDKYTFEEIQQETDIPERELVRALQSLACGKPTQRVLTKEPKSKEIESGHMFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLARTPEDRKVYTYVA 768
BLAST of CN186277 vs. ExPASy Swiss-Prot
Match: CUL3B_XENLA (Cullin-3-B OS=Xenopus laevis GN=cul3b PE=1 SV=1) HSP 1 Score: 231.106 bits (588), Expect = 5.694e-60 Identity = 128/247 (51.82%), Postives = 170/247 (68.83%), Query Frame = -2 Query: 132 CNLPAEMSALCEKFRSYYLGTHTGRRLSWQTNMGSADIKATF------------GKG---------QKHELNVSTYQMCVLMLFNNADRLSYREIEQATEIPASDLKRCLQSLACVRG-KNVLRKEPMSKDIGEDDAFFVNDKFTSKFYKVKIGTVVA-QKESEPEKQETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNNIIAEVTKQLQSRFLANPTEIKKRIESLIERDFLERDNVDRKLYRYLA 803 CN+P E FR +YL H+GR+L+ Q +MGSAD+ ATF G G +KH L VST+QM +LMLFNN ++ ++ EI+Q T+IP +L R LQSLAC + + VL KEP SK+I F VND+FTSK ++VKI TV A Q ES+PE++ETRQ+V++DRK +IEAAIVRIMKSR+ + HN ++AEVT+QL++RFL +P IKKRIE LIER++L R DRK+Y Y+A Sbjct: 522 CNIPPSPRHAFEIFRRFYLAKHSGRQLTLQHHMGSADLNATFYGAVKKEDGSEVGVGGAQVTGSNTRKHILQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLACGKPTQRVLTKEPKSKEIESGHMFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLARTPEDRKVYTYVA 768
BLAST of CN186277 vs. ExPASy Swiss-Prot
Match: CUL3_XENTR (Cullin-3 OS=Xenopus tropicalis GN=cul3 PE=2 SV=1) HSP 1 Score: 230.72 bits (587), Expect = 7.436e-60 Identity = 128/247 (51.82%), Postives = 170/247 (68.83%), Query Frame = -2 Query: 132 CNLPAEMSALCEKFRSYYLGTHTGRRLSWQTNMGSADIKATF------------GKG---------QKHELNVSTYQMCVLMLFNNADRLSYREIEQATEIPASDLKRCLQSLACVRG-KNVLRKEPMSKDIGEDDAFFVNDKFTSKFYKVKIGTVVA-QKESEPEKQETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNNIIAEVTKQLQSRFLANPTEIKKRIESLIERDFLERDNVDRKLYRYLA 803 CN+P E FR +YL H+GR+L+ Q +MGSAD+ ATF G G +KH L VST+QM +LMLFNN ++ ++ EI+Q T+IP +L R LQSLAC + + VL KEP SK+I F VND+FTSK ++VKI TV A Q ES+PE++ETRQ+V++DRK +IEAAIVRIMKSR+ + HN ++AEVT+QL++RFL +P IKKRIE LIER++L R DRK+Y Y+A Sbjct: 522 CNIPPAPRHAFEIFRRFYLAKHSGRQLTLQHHMGSADLNATFYGPVKKEDGSEVGVGGAQVTGSNTRKHILQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLACGKPTQRVLTKEPKSKEIESGHMFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLARTPEDRKVYTYVA 768
BLAST of CN186277 vs. ExPASy Swiss-Prot
Match: CUL3_MOUSE (Cullin-3 OS=Mus musculus GN=Cul3 PE=1 SV=1) HSP 1 Score: 230.72 bits (587), Expect = 7.436e-60 Identity = 128/247 (51.82%), Postives = 170/247 (68.83%), Query Frame = -2 Query: 132 CNLPAEMSALCEKFRSYYLGTHTGRRLSWQTNMGSADIKATF------------GKG---------QKHELNVSTYQMCVLMLFNNADRLSYREIEQATEIPASDLKRCLQSLACVRG-KNVLRKEPMSKDIGEDDAFFVNDKFTSKFYKVKIGTVVA-QKESEPEKQETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNNIIAEVTKQLQSRFLANPTEIKKRIESLIERDFLERDNVDRKLYRYLA 803 CN+P E FR +YL H+GR+L+ Q +MGSAD+ ATF G G +KH L VST+QM +LMLFNN ++ ++ EI+Q T+IP +L R LQSLAC + + VL KEP SK+I F VND+FTSK ++VKI TV A Q ES+PE++ETRQ+V++DRK +IEAAIVRIMKSR+ + HN ++AEVT+QL++RFL +P IKKRIE LIER++L R DRK+Y Y+A Sbjct: 522 CNIPPAPRHAFEIFRRFYLAKHSGRQLTLQHHMGSADLNATFYGPVKKEDGSEVGVGGAQVTGSNTRKHILQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLACGKPTQRVLTKEPKSKEIESGHIFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLARTPEDRKVYTYVA 768
BLAST of CN186277 vs. ExPASy Swiss-Prot
Match: CUL3_HUMAN (Cullin-3 OS=Homo sapiens GN=CUL3 PE=1 SV=2) HSP 1 Score: 230.72 bits (587), Expect = 7.436e-60 Identity = 128/247 (51.82%), Postives = 170/247 (68.83%), Query Frame = -2 Query: 132 CNLPAEMSALCEKFRSYYLGTHTGRRLSWQTNMGSADIKATF------------GKG---------QKHELNVSTYQMCVLMLFNNADRLSYREIEQATEIPASDLKRCLQSLACVRG-KNVLRKEPMSKDIGEDDAFFVNDKFTSKFYKVKIGTVVA-QKESEPEKQETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNNIIAEVTKQLQSRFLANPTEIKKRIESLIERDFLERDNVDRKLYRYLA 803 CN+P E FR +YL H+GR+L+ Q +MGSAD+ ATF G G +KH L VST+QM +LMLFNN ++ ++ EI+Q T+IP +L R LQSLAC + + VL KEP SK+I F VND+FTSK ++VKI TV A Q ES+PE++ETRQ+V++DRK +IEAAIVRIMKSR+ + HN ++AEVT+QL++RFL +P IKKRIE LIER++L R DRK+Y Y+A Sbjct: 522 CNIPPAPRHAFEIFRRFYLAKHSGRQLTLQHHMGSADLNATFYGPVKKEDGSEVGVGGAQVTGSNTRKHILQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLACGKPTQRVLTKEPKSKEIENGHIFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLARTPEDRKVYTYVA 768
BLAST of CN186277 vs. ExPASy Swiss-Prot
Match: CUL3_DICDI (Cullin-3 OS=Dictyostelium discoideum GN=culC PE=3 SV=1) HSP 1 Score: 229.565 bits (584), Expect = 1.657e-59 Identity = 125/260 (48.08%), Postives = 165/260 (63.46%), Query Frame = -2 Query: 132 SVTCNLPAEMSALCEKFRSYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYREIEQATEIPASDLKRCLQSLACVRGKNVLRKEPM---------------------------------SKDIGEDDAFFVNDKFTSKFYKVKIGTVVAQKESEPEKQETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNNIIAEVTKQLQSRFLANPTEIKKRIESLIERDFLERDNVDRKLYRYLA 812 + CNLP E+ CE F+SYYL H GR L WQTNMG+A+IKA F + HEL VS+YQM +L+LFN+ +L+++EI T IP DLKR L +L + K + R+ P SK I E D F N KF SK ++VK+ VV QKE+ E++ETR +V+EDRK QIEA+IVRIMK+R+ L+H+N+++EV KQLQSRF+ NP +KKRIESLIER++LER DRK+Y Y+A Sbjct: 512 TANCNLPREILLCCEAFKSYYLSNHNGRLLLWQTNMGTAEIKANF-PSKSHELQVSSYQMVILLLFNDQSKLTFKEIADQTGIPTIDLKRNLLALTNPKNKILDRELPSTTSSTTTTTTTATSSSTSTSPSSSSSSISTPTPSKSIDESDVFAFNTKFKSKLFRVKVMAVV-QKETPVEEKETRDKVDEDRKHQIEASIVRIMKARKTLEHSNLVSEVIKQLQSRFVPNPVIVKKRIESLIEREYLERSKQDRKIYNYMA 769
BLAST of CN186277 vs. ExPASy Swiss-Prot
Match: CUL3_CAEEL (Cullin-3 OS=Caenorhabditis elegans GN=cul-3 PE=1 SV=2) HSP 1 Score: 199.904 bits (507), Expect = 1.406e-50 Identity = 114/259 (44.02%), Postives = 161/259 (62.16%), Query Frame = -2 Query: 132 PSVTCN---LPAEMSALCEKFRSYYLGTHTGRRLSWQTNMGSADIKATF--------------------GKGQKHE------LNVSTYQMCVLMLFNNADRLSYREIEQATEIPASDLKRCLQSLACVRGKN--VLRKEPMSKDIGEDDAFFVNDKFTSKFYKVKIGTVVAQKESEPEKQETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNNIIAEVTKQLQSRFLANPTEIKKRIESLIERDFLERDNVDRKLYRYLA 815 P+V CN LP E+S E F YY HTGR+L+ T +G+AD+KATF G+ K L V+T+QM +L+ FN+ +R+S +++ +IP +LKR LQSLA + ++RK I D F VND F SK +VK+ V + ESEPE +ETRQ+VE+DRK ++EAAIVRIMK+R+ L+HNN++AEVT+QL+ RF+ +P IK+RIE+LIER++L RD D + Y+Y+A Sbjct: 519 PTVQCNPVVLPQELSVAYEMFTQYYTEKHTGRKLTINTLLGNADVKATFYPPPKASMSNEENGPGPSSSGESMKERKPEHKILQVNTHQMIILLQFNHHNRISCQQLMDELKIPERELKRNLQSLALGKASQRILVRKNKGKDAIDMSDEFAVNDNFQSKLTRVKVQMVTGKVESEPEIRETRQKVEDDRKLEVEAAIVRIMKARKKLNHNNLVAEVTQQLRHRFMPSPIIIKQRIETLIEREYLARDEHDHRAYQYIA 777
BLAST of CN186277 vs. ExPASy Swiss-Prot
Match: CUL4B_HUMAN (Cullin-4B OS=Homo sapiens GN=CUL4B PE=1 SV=3) HSP 1 Score: 196.052 bits (497), Expect = 2.030e-49 Identity = 105/223 (47.09%), Postives = 148/223 (66.37%), Query Frame = -2 Query: 132 NLPAEMSALCEKFRSYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYREIEQATEIPASDLKRCLQSLACVRGKNVLRKEPMSKDIGEDDAFFVNDKFTSKFYKVKIGTVVAQKESEPEKQETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNNIIAEVTKQLQSRFLANPTEIKKRIESLIERDFLERDNVDRKLYRYLA 800 +LP EM L E F+++YLG H+GR+L WQ+ +G +KA F +G+K EL VS +Q VL++FN + S EI+QAT I +L+R LQSLAC + + VL K P KDI + D F ND F K +++KI + KE+ E+ T +RV +DR+ QI+AAIVRIMK R+ L HN +++EV QL +F P ++KKRIESLI+RD++ERD + Y Y+A Sbjct: 678 HLPPEMVKLQEIFKTFYLGKHSGRKLQWQSTLGHCVLKAEFKEGKK-ELQVSLFQTLVLLMFNEGEEFSLEEIKQATGIEDGELRRTLQSLACGKAR-VLAKNPKGKDIEDGDKFICNDDFKHKLFRIKINQI-QMKETVEEQASTTERVFQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQL--KFPVKPADLKKRIESLIDRDYMERDKENPNQYNYIA 895
BLAST of CN186277 vs. ExPASy Swiss-Prot
Match: CUL3_SCHPO (Cullin-3 OS=Schizosaccharomyces pombe GN=cul3 PE=1 SV=2) HSP 1 Score: 192.971 bits (489), Expect = 1.718e-48 Identity = 99/230 (43.04%), Postives = 149/230 (64.78%), Query Frame = -2 Query: 132 VTCNLPAEMSALCEKFRSYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADR---LSYREIEQATEIPASDLKRCLQSLACVRGKNVLRKEPMSKDIGEDDAFFVNDKFTSKFYKVKIGTVVAQK-ESEPEKQETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNNIIAEVTKQLQSRFLANPTEIKKRIESLIERDFLERDNVDRKLYRYLA 809 + CN P + A ++F +YL HTGR+L W +MGSAD++ F K +K++LNVST +L+LF + L + EI + T I DLKR LQSLAC + K +L K+P +++ D F+ N+ F S ++KI TV + E + E++ T ++V+E RK Q +A IVR+MK R+V +HN ++AEVT+QL RF +P IK+RIE+LIER++L+R + ++Y YLA Sbjct: 558 IKCNFPKVLLAQIDQFTDFYLSKHTGRKLLWYPSMGSADVRVNF-KDRKYDLNVSTIASVILLLFQDLKENQCLIFEEILEKTNIEVGDLKRNLQSLACAKYK-ILLKDPKGREVNAGDKFYFNENFVSNLARIKISTVAQTRVEDDSERKRTLEKVDESRKHQADACIVRVMKDRKVCEHNQLMAEVTRQLNPRFHPSPMMIKRRIEALIEREYLQRQADNGRIYEYLA 785
BLAST of CN186277 vs. ExPASy Swiss-Prot
Match: CUL4A_MOUSE (Cullin-4A OS=Mus musculus GN=Cul4a PE=2 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 1.114e-47 Identity = 103/223 (46.19%), Postives = 147/223 (65.92%), Query Frame = -2 Query: 132 NLPAEMSALCEKFRSYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYREIEQATEIPASDLKRCLQSLACVRGKNVLRKEPMSKDIGEDDAFFVNDKFTSKFYKVKIGTVVAQKESEPEKQETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNNIIAEVTKQLQSRFLANPTEIKKRIESLIERDFLERDNVDRKLYRYLA 800 +LP EM L E F+++YLG H+GR+L WQT +G A +KA F +G+K E VS +Q VL++FN D S+ EI+ AT I S+L+R LQSLAC + + VL K P K++ + D F N F K +++KI + KE+ E+ T +RV +DR+ QI+AAIVRIMK R+ L HN +++E+ QL +F P ++KKRIESLI+RD++ERD Y Y+A Sbjct: 542 HLPPEMVRLQEVFKTFYLGKHSGRKLQWQTTLGHAVLKADFKEGKK-EFQVSLFQTLVLLMFNEGDGFSFEEIKMATGIEDSELRRTLQSLACGKAR-VLIKSPKGKEVEDGDKFIFNADFKHKLFRIKINQ-IQMKETVEEQVSTTERVFQDRQYQIDAAIVRIMKMRKTLGHNLLVSELYNQL--KFPVKPGDLKKRIESLIDRDYMERDKDSPNQYHYVA 759 The following BLAST results are available for this feature:
BLAST of CN186277 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 36
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186277 ID=CN186277; Name=CN186277; organism=Citrus sinensis; type=EST; length=816bpback to top |