CN186264

Overview
NameCN186264
Unique NameCN186264
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length771
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN186264 vs. ExPASy Swiss-Prot
Match: NTF3_TOBAC (Mitogen-activated protein kinase homolog NTF3 OS=Nicotiana tabacum GN=NTF3 PE=1 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 3.045e-52
Identity = 97/119 (81.51%), Postives = 110/119 (92.44%), Query Frame = -1
Query:  415 SRREEDLEFIDNPKARKYIKSLPYTPGTPFSRLYPNAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDPSSNPPAQVPIDLDMDEESGEEMIREMMLKEMLHYHPEAITANTEV 771
            S+REED+EFIDNPKARKYIKSLPY+PGTPFSRLYP+AHPLAIDLLQ+MLVFDP+KRISV EALQHPYMSPLYDP+++PPAQVPI+LD+DE+ GEE IREMM  E+L YHPEA TA  EV
Sbjct:  252 SQREEDIEFIDNPKARKYIKSLPYSPGTPFSRLYPHAHPLAIDLLQRMLVFDPSKRISVIEALQHPYMSPLYDPNTDPPAQVPINLDIDEDLGEETIREMMWSEILEYHPEAATAAMEV 370          
BLAST of CN186264 vs. ExPASy Swiss-Prot
Match: MAPK_PETHY (Mitogen-activated protein kinase homolog 1 OS=Petunia hybrida GN=MEK1 PE=2 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.511e-51
Identity = 95/115 (82.61%), Postives = 108/115 (93.91%), Query Frame = -1
Query:  427 SRREEDLEFIDNPKARKYIKSLPYTPGTPFSRLYPNAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDPSSNPPAQVPIDLDMDEESGEEMIREMMLKEMLHYHPEAITA 771
            S+REED+EFIDNPKARKYIKSLPY+PGTPFSRLYPNAHPLAIDLLQ+MLVFDP+KRISV EALQHPYMSPLYDP+++PPAQVPI+LD+DE+  EE IREMM +E+LHYHPEA  A
Sbjct:  252 SQREEDIEFIDNPKARKYIKSLPYSPGTPFSRLYPNAHPLAIDLLQRMLVFDPSKRISVMEALQHPYMSPLYDPNTDPPAQVPINLDIDEDLVEETIREMMWEEILHYHPEAAVA 366          
BLAST of CN186264 vs. ExPASy Swiss-Prot
Match: MPK1_ARATH (Mitogen-activated protein kinase 1 OS=Arabidopsis thaliana GN=MPK1 PE=1 SV=2)

HSP 1 Score: 200.29 bits (508), Expect = 9.797e-51
Identity = 94/119 (78.99%), Postives = 108/119 (90.76%), Query Frame = -1
Query:  415 SRREEDLEFIDNPKARKYIKSLPYTPGTPFSRLYPNAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDPSSNPPAQVPIDLDMDEESGEEMIREMMLKEMLHYHPEAITANTEV 771
            S+REEDLEFIDNPKA++YI+SLPY+PG   SRLYP AH LAIDLLQKMLVFDP+KRISV+EALQHPYM+PLYDP++NPPAQVPIDLD+DE+  EEMIREMM  EMLHYHP+A T NTE+
Sbjct:  252 SQREEDLEFIDNPKAKRYIRSLPYSPGMSLSRLYPGAHVLAIDLLQKMLVFDPSKRISVSEALQHPYMAPLYDPNANPPAQVPIDLDVDEDLREEMIREMMWNEMLHYHPQASTLNTEL 370          
BLAST of CN186264 vs. ExPASy Swiss-Prot
Match: MPK3_ORYSJ (Mitogen-activated protein kinase 3 OS=Oryza sativa subsp. japonica GN=MPK3 PE=2 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.415e-49
Identity = 90/112 (80.36%), Postives = 100/112 (89.29%), Query Frame = -1
Query:  427 EEDLEFIDNPKARKYIKSLPYTPGTPFSRLYPNAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDPSSNPPAQVPIDLDMDEESGEEMIREMMLKEMLHYHPEAITA 762
            E DLEFIDNPKAR+YIKSLPYTPG P + +YP+AHPLAIDLLQKML+FDPTKRISVTEAL+HPYMSPLYDPS+NPPAQVPIDLD+DE    +MIREMM  EMLHYHPE + A
Sbjct:  255 ESDLEFIDNPKARRYIKSLPYTPGVPLASMYPHAHPLAIDLLQKMLIFDPTKRISVTEALEHPYMSPLYDPSANPPAQVPIDLDIDENISADMIREMMWHEMLHYHPEVVAA 366          
BLAST of CN186264 vs. ExPASy Swiss-Prot
Match: MPK4_ORYSJ (Mitogen-activated protein kinase 4 OS=Oryza sativa subsp. japonica GN=MPK4 PE=2 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 5.376e-49
Identity = 89/110 (80.91%), Postives = 100/110 (90.91%), Query Frame = -1
Query:  433 EEDLEFIDNPKARKYIKSLPYTPGTPFSRLYPNAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDPSSNPPAQVPIDLDMDEESGEEMIREMMLKEMLHYHPEAI 762
            E D+EFIDNPKARKYIK+LPYTPG P + +YP AHPLAIDLLQKMLVFDP+KRISVTEAL+HPYMSPLYDPS+NPPAQVPIDLD+DE  G +MIREMM +EMLHYHPE +
Sbjct:  255 EADIEFIDNPKARKYIKTLPYTPGIPLTSMYPQAHPLAIDLLQKMLVFDPSKRISVTEALEHPYMSPLYDPSANPPAQVPIDLDIDENLGVDMIREMMWQEMLHYHPEVV 364          
BLAST of CN186264 vs. ExPASy Swiss-Prot
Match: MPK2_ARATH (Mitogen-activated protein kinase 2 OS=Arabidopsis thaliana GN=MPK2 PE=1 SV=2)

HSP 1 Score: 194.126 bits (492), Expect = 7.021e-49
Identity = 94/123 (76.42%), Postives = 107/123 (86.99%), Query Frame = -1
Query:  409 SRREEDLEFIDNPKARKYIKSLPYTPGTPFSRLYPNAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDPSSNPPAQVPIDLDMDEES--GEEMIREMMLKEMLHYHPEAITANTEVCS 771
            S+REEDLEFIDNPKA++YI+SLPY+PG  FSRLYP A+ LAIDLLQKMLV DP+KRISVTEALQHPYM+PLYDPS+NPPAQVPIDLD+DE+   G EMIRE+M KEM+HYHPEA T N    S
Sbjct:  252 SQREEDLEFIDNPKAKRYIESLPYSPGISFSRLYPGANVLAIDLLQKMLVLDPSKRISVTEALQHPYMAPLYDPSANPPAQVPIDLDVDEDEDLGAEMIRELMWKEMIHYHPEAATINNNEVS 374          
BLAST of CN186264 vs. ExPASy Swiss-Prot
Match: MPK7_ARATH (Mitogen-activated protein kinase 7 OS=Arabidopsis thaliana GN=MPK7 PE=2 SV=2)

HSP 1 Score: 170.244 bits (430), Expect = 1.086e-41
Identity = 81/116 (69.83%), Postives = 96/116 (82.76%), Query Frame = -1
Query:  424 SRREEDLEFIDNPKARKYIKSLPYTPGTPFSRLYPNAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDPSSNPPAQVPIDLDMDEESGEEMIREMMLKEMLHYHPEAITAN 771
            S++E D+ FIDNPKAR++IKSLPY+ GT  S LYP A+PLAIDLLQ+MLVFDPTKRISVT+AL HPYM+ L+DP SNPPA VPI LD+DE   E +IREMM  EML+YHPEA  +N
Sbjct:  252 SQQESDIRFIDNPKARRFIKSLPYSRGTHLSNLYPQANPLAIDLLQRMLVFDPTKRISVTDALLHPYMAGLFDPGSNPPAHVPISLDIDENMEEPVIREMMWNEMLYYHPEAEISN 367          
BLAST of CN186264 vs. ExPASy Swiss-Prot
Match: MPK14_ARATH (Mitogen-activated protein kinase 14 OS=Arabidopsis thaliana GN=MPK14 PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 8.332e-34
Identity = 70/113 (61.95%), Postives = 90/113 (79.65%), Query Frame = -1
Query:  436 SRREEDLEFIDNPKARKYIKSLPYTPGTPFSRLYPNAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDPSSNPPAQVPI-DLDMDEESGEEMIREMMLKEMLHYHPEA 771
            S+++ DL+FIDN KAR++IKSLP++ GT FS +YP+A+PLAIDLLQ+MLVFDPTKRISV++AL HPYM  L +P  NP   VP+  L++DE    +MIREMM +EMLHY P A
Sbjct:  249 SQQDWDLQFIDNQKARRFIKSLPFSKGTHFSHIYPHANPLAIDLLQRMLVFDPTKRISVSDALLHPYMEGLLEPECNPSENVPVSSLEIDENMEGDMIREMMWEEMLHYLPRA 361          
BLAST of CN186264 vs. ExPASy Swiss-Prot
Match: ERKA_DROME (Mitogen-activated protein kinase ERK-A OS=Drosophila melanogaster GN=rl PE=1 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 5.602e-22
Identity = 49/109 (44.95%), Postives = 73/109 (66.97%), Query Frame = -1
Query:  448 SRREEDLEFIDNPKARKYIKSLPYTPGTPFSRLYPNAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDPSSNPPAQVPIDLDMD-EESGEEMIREMMLKEMLHY 771
            S   +DLE I N KAR Y++SLP+ P  P+++L+PNA  LA+DLL KML F+P KRI V EAL HPY+   YDP   P A+VP  ++M+ ++   + ++ ++ +E L +
Sbjct:  309 SPSRDDLECIINEKARNYLESLPFKPNVPWAKLFPNADALALDLLGKMLTFNPHKRIPVEEALAHPYLEQYYDPGDEPVAEVPFRINMENDDISRDALKSLIFEETLKF 417          
BLAST of CN186264 vs. ExPASy Swiss-Prot
Match: MK01_XENLA (Mitogen-activated protein kinase 1 OS=Xenopus laevis GN=mapk1 PE=1 SV=3)

HSP 1 Score: 102.834 bits (255), Expect = 2.129e-21
Identity = 50/111 (45.05%), Postives = 71/111 (63.96%), Query Frame = -1
Query:  442 SRREEDLEFIDNPKARKYIKSLPYTPGTPFSRLYPNAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDPSSNPPAQVPIDLDMD-EESGEEMIREMMLKEMLHYHP 771
            S  +EDL  I N KAR Y+ SLP+    P++RL+PNA P A+DLL KML F+P KRI V  AL HPY+   YDPS  P A+ P   +M+ ++  +E ++E++ +E   + P
Sbjct:  249 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADPKALDLLDKMLTFNPHKRIEVEAALAHPYLEQYYDPSDEPVAEAPFKFEMELDDLPKETLKELIFEETARFQP 359          
The following BLAST results are available for this feature:
BLAST of CN186264 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 155
Match NameE-valueIdentityDescription
NTF3_TOBAC3.045e-5281.51Mitogen-activated protein kinase homolog NTF3 OS=N... [more]
MAPK_PETHY1.511e-5182.61Mitogen-activated protein kinase homolog 1 OS=Petu... [more]
MPK1_ARATH9.797e-5178.99Mitogen-activated protein kinase 1 OS=Arabidopsis ... [more]
MPK3_ORYSJ1.415e-4980.36Mitogen-activated protein kinase 3 OS=Oryza sativa... [more]
MPK4_ORYSJ5.376e-4980.91Mitogen-activated protein kinase 4 OS=Oryza sativa... [more]
MPK2_ARATH7.021e-4976.42Mitogen-activated protein kinase 2 OS=Arabidopsis ... [more]
MPK7_ARATH1.086e-4169.83Mitogen-activated protein kinase 7 OS=Arabidopsis ... [more]
MPK14_ARATH8.332e-3461.95Mitogen-activated protein kinase 14 OS=Arabidopsis... [more]
ERKA_DROME5.602e-2244.95Mitogen-activated protein kinase ERK-A OS=Drosophi... [more]
MK01_XENLA2.129e-2145.05Mitogen-activated protein kinase 1 OS=Xenopus laev... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002K03_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002K03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186264 ID=CN186264; Name=CN186264; organism=Citrus sinensis; type=EST; length=771bp
TTTTTTTTTTTTTTTTCATTGTTAACTTACTCTCATGTATCCCCATTTTA
ATTTACAAAAAATAAGTTCATACACAAACAGCACCCCTCTTATATACAAA
TTAAACAGGGCCACCTACGGTACAGTACAGCGCTCAAACTCATAACCATA
CTTTAAAACAAAACAAAAAAAACAAAACGAAACAAAACAAAACAAAATTA
TTAGCAGCCCTACTAATGACTAATGCCATGTTTCTTCTGGATTATTAAAA
AACAGGAAACAGAATGCAAATAAATAACTGTCATCAGCTGAAGTAGCTTA
CTAAGGCGAAGGAATTCTTCGTTGATTGCACGAGCTAGCCAGCAAGCAAG
CAAACCCAAACAGTTCTCCCCATTCCTCACTGTTAAGCCAAGGAAGACAA
GATTAGGAGGAGCACACCTCAGTGTTGGCTGTAATTGCCTCGGGGTGGTA
ATGCAGCATTTCCTTCAACATCATTTCCCTTATCATCTCTTCCCCTGATT
CCTCATCCATATCAAGATCAATAGGCACCTGAGCTGGAGGGTTAGAGCTA
GGATCATACAGTGGGGACATGTAAGGGTGTTGGAGTGCTTCAGTAACACT
AATCCTCTTTGTAGGGTCAAAAACAAGCATCTTTTGCAGCAGATCAATAG
CTAAAGGATGCGCATTCGGGTAAAGACGGGAAAAGGGAGTCCCAGGTGTA
TACGGAAGCGATTTAATGTATTTCCTCGCCTTTGGGTTGTCAATAAACTC
AAGATCCTCCTCCCTTCGGCT
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