CN186221

Overview
NameCN186221
Unique NameCN186221
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length513
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN186221 vs. ExPASy Swiss-Prot
Match: VPE_CITSI (Vacuolar-processing enzyme OS=Citrus sinensis PE=2 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 1.391e-41
Identity = 80/83 (96.39%), Postives = 80/83 (96.39%), Query Frame = -3
Query:  263 EILNTVRPAGQPLVDDWGCLKSLVRTFELHCPPLSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 511
            EILNTVRPAGQPLVDDWGCLKSLVRTFE HC  LSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA
Sbjct:  412 EILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 494          
BLAST of CN186221 vs. ExPASy Swiss-Prot
Match: VPE1_PHAVU (Vacuolar-processing enzyme OS=Phaseolus vulgaris PE=1 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 4.960e-31
Identity = 61/83 (73.49%), Postives = 68/83 (81.93%), Query Frame = -3
Query:  263 EILNTVRPAGQPLVDDWGCLKSLVRTFELHCPPLSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 511
            E+LN VRPAG  LVDDW CLK++VRTFE HC  LSQYGMKHMRS AN+CN GI KE+M EASAQAC  IP+ PWSSL +GFSA
Sbjct:  402 ELLNAVRPAGSALVDDWDCLKTMVRTFETHCGSLSQYGMKHMRSFANMCNVGIKKEQMREASAQACVTIPANPWSSLQRGFSA 484          
BLAST of CN186221 vs. ExPASy Swiss-Prot
Match: VPE_VICSA (Vacuolar-processing enzyme OS=Vicia sativa PE=1 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 2.462e-30
Identity = 60/83 (72.29%), Postives = 68/83 (81.93%), Query Frame = -3
Query:  263 EILNTVRPAGQPLVDDWGCLKSLVRTFELHCPPLSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 511
            E+L+ VRPAG PLVD+W CLK++V+TFE HC  LSQYGMKHMRS ANICN GI  E MAEASAQAC +IP+ PWSSL  GFSA
Sbjct:  411 ELLDVVRPAGSPLVDNWDCLKTMVKTFETHCGSLSQYGMKHMRSFANICNAGIPNEPMAEASAQACASIPANPWSSLQGGFSA 493          
BLAST of CN186221 vs. ExPASy Swiss-Prot
Match: VPEG_ARATH (Vacuolar-processing enzyme gamma-isozyme OS=Arabidopsis thaliana GN=At4g32940 PE=2 SV=2)

HSP 1 Score: 129.413 bits (324), Expect = 9.354e-30
Identity = 58/83 (69.88%), Postives = 68/83 (81.93%), Query Frame = -3
Query:  263 EILNTVRPAGQPLVDDWGCLKSLVRTFELHCPPLSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 511
            E+LN VR AGQPLVDDW CLK+ VR FE HC  LSQYG+KHMRS ANICN GI  E+M EA++QAC  +P+GPWSSL++GFSA
Sbjct:  412 EVLNKVRSAGQPLVDDWNCLKNQVRAFERHCGSLSQYGIKHMRSFANICNAGIQMEQMEEAASQACTTLPTGPWSSLNRGFSA 494          
BLAST of CN186221 vs. ExPASy Swiss-Prot
Match: VPEA_ARATH (Vacuolar-processing enzyme alpha-isozyme OS=Arabidopsis thaliana GN=At2g25940 PE=2 SV=2)

HSP 1 Score: 128.642 bits (322), Expect = 1.596e-29
Identity = 57/82 (69.51%), Postives = 67/82 (81.71%), Query Frame = -3
Query:  263 ILNTVRPAGQPLVDDWGCLKSLVRTFELHCPPLSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 508
            +LN VRP+G+PLVDDW CLKSLVR FE HC  LSQYG+KHMRS+AN+CN GI   +M EA+ QAC  IP+ PWSSLD+GFSA
Sbjct:  397 VLNKVRPSGEPLVDDWDCLKSLVRAFERHCGSLSQYGIKHMRSIANMCNAGIQMRQMEEAAMQACPTIPTSPWSSLDRGFSA 478          
BLAST of CN186221 vs. ExPASy Swiss-Prot
Match: VPE_RICCO (Vacuolar-processing enzyme OS=Ricinus communis PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 2.728e-21
Identity = 46/82 (56.10%), Postives = 55/82 (67.07%), Query Frame = -3
Query:  263 ILNTVRPAGQPLVDDWGCLKSLVRTFELHCPPLSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 508
            IL +VR  G PLVDDWGCLKS+VR FE  C  L+QYGMKHMR+ ANICN G+    M EA   AC    +G W   ++G+SA
Sbjct:  416 ILKSVREPGSPLVDDWGCLKSMVRVFETCCGSLTQYGMKHMRTFANICNAGVSHTSMEEACNAACSGHDAGQWHPTNQGYSA 497          
BLAST of CN186221 vs. ExPASy Swiss-Prot
Match: VPE_SOYBN (Vacuolar-processing enzyme OS=Glycine max PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 2.309e-20
Identity = 44/82 (53.66%), Postives = 57/82 (69.51%), Query Frame = -3
Query:  263 ILNTVRPAGQPLVDDWGCLKSLVRTFELHCPPLSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 508
            +L +VR  G  LVDDW CLKS+VR FE HC  L+QYGMKHMR+ ANICN+G+ +  M EA   ACE   +G +   ++G+SA
Sbjct:  414 VLQSVRAPGSSLVDDWTCLKSMVRVFETHCGTLTQYGMKHMRAFANICNSGVSEASMEEACLAACEGYNAGLFHPSNRGYSA 495          
BLAST of CN186221 vs. ExPASy Swiss-Prot
Match: VPEB_ARATH (Vacuolar-processing enzyme beta-isozyme OS=Arabidopsis thaliana GN=At1g62710 PE=2 SV=3)

HSP 1 Score: 97.0561 bits (240), Expect = 5.145e-20
Identity = 43/65 (66.15%), Postives = 49/65 (75.38%), Query Frame = -3
Query:  314 ILNTVRPAGQPLVDDWGCLKSLVRTFELHCPPLSQYGMKHMRSLANICNTGIGKEKMAEASAQAC 508
            +LN VR  G PLVDDW CLKS+VR FE HC  L+QYGMKHMR+ AN+CN G+ KE M EAS  AC
Sbjct:  403 VLNLVREPGLPLVDDWECLKSMVRVFEEHCGSLTQYGMKHMRAFANVCNNGVSKELMEEASTAAC 467          
BLAST of CN186221 vs. ExPASy Swiss-Prot
Match: LEGU_CANEN (Legumain OS=Canavalia ensiformis PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 1.497e-19
Identity = 43/82 (52.44%), Postives = 55/82 (67.07%), Query Frame = -3
Query:  263 ILNTVRPAGQPLVDDWGCLKSLVRTFELHCPPLSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 508
            +L++VR  G PLVDDW CLKS+VR FE HC  L+QYGMKHMR+  N+CN+G+ K  M EA   AC    +G     + G+SA
Sbjct:  394 VLHSVRAPGLPLVDDWTCLKSMVRVFETHCGSLTQYGMKHMRAFGNVCNSGVSKASMEEACKAACGGYDAGLLYPSNTGYSA 475          
BLAST of CN186221 vs. ExPASy Swiss-Prot
Match: VPE2_PHAVU (Vacuolar-processing enzyme OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 5.688e-19
Identity = 42/82 (51.22%), Postives = 55/82 (67.07%), Query Frame = -3
Query:  263 ILNTVRPAGQPLVDDWGCLKSLVRTFELHCPPLSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 508
            +L +VR  G PLVDDW CLKS+VR +E HC  L+QYGMKHMR+ ANICN+G+ +  M +A   AC    +G     + G+SA
Sbjct:  412 VLRSVRTTGLPLVDDWTCLKSMVRVYETHCGSLTQYGMKHMRAFANICNSGVSETSMEKACVAACGGYHAGLLHPSNTGYSA 493          
The following BLAST results are available for this feature:
BLAST of CN186221 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
VPE_CITSI1.391e-4196.39Vacuolar-processing enzyme OS=Citrus sinensis PE=2... [more]
VPE1_PHAVU4.960e-3173.49Vacuolar-processing enzyme OS=Phaseolus vulgaris P... [more]
VPE_VICSA2.462e-3072.29Vacuolar-processing enzyme OS=Vicia sativa PE=1 SV... [more]
VPEG_ARATH9.354e-3069.88Vacuolar-processing enzyme gamma-isozyme OS=Arabid... [more]
VPEA_ARATH1.596e-2969.51Vacuolar-processing enzyme alpha-isozyme OS=Arabid... [more]
VPE_RICCO2.728e-2156.10Vacuolar-processing enzyme OS=Ricinus communis PE=... [more]
VPE_SOYBN2.309e-2053.66Vacuolar-processing enzyme OS=Glycine max PE=2 SV=... [more]
VPEB_ARATH5.145e-2066.15Vacuolar-processing enzyme beta-isozyme OS=Arabido... [more]
LEGU_CANEN1.497e-1952.44Legumain OS=Canavalia ensiformis PE=1 SV=1[more]
VPE2_PHAVU5.688e-1951.22Vacuolar-processing enzyme OS=Phaseolus vulgaris P... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS05_0002I22_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002I22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186221 ID=CN186221; Name=CN186221; organism=Citrus sinensis; type=EST; length=513bp
TTTTTTTTTTTTTTAGCATAAAATAGCATCGCATACATCCAAAATATATT
CTATCAAATTACAACTGCGGTCTGGCAGGGAAGAGCTTTTAAATATAATA
ATTACAAGGAAGCAATCACCAGCCAAATGAAAATAGACATTGCCATAAAT
GGAAGCAATCATCAGCCAAATGAAAATAGATATTGCCATATTGGGGGCTG
TAAGGAAAACTAACATATTTCAAGACTGGCTTATGATATTCGCACAGTTC
TCGGCTTCTTTATGCACTGAATCCTTTGTCGAGAGAACTCCAAGGACCAG
AAGGAATATTTTCACAGGCTTGTGCTGATGCTTCAGCCATCTTCTCTTTC
CCAATTCCTGTATTACAGATGTTTGCAAGAGAACGCATGTGCTTCATTCC
ATATTGCGATAGAGGGGGGCAGTGCAACTCAAAAGTCCTCACCAGTGATT
TGAGGCAGCCCCAGTCATCAACAAGAGGCTGACCAGCAGGTCGAACAGTG
TTCAAGATCTCTG
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