CN186204

Overview
NameCN186204
Unique NameCN186204
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length611
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CN186204 vs. ExPASy Swiss-Prot
Match: CNGT2_ARATH (Cytokinin-N-glucosyltransferase 2 OS=Arabidopsis thaliana GN=UGT76C2 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.398e-13
Identity = 30/68 (44.12%), Postives = 54/68 (79.41%), Query Frame = -1 
Query:  408 SDVWKVGLHLERKLERGEVERAIRRVMVDAEGREMRNRAEILKEKLDLCTKQGSFSYQSLENLISYIL 611
            SD+WK+G+HLE ++E+ E+E+A+R +M ++EG ++R R ++LK++++   KQG  S+QS+E L ++IL
Sbjct:  381 SDIWKIGIHLEGRIEKKEIEKAVRVLMEESEGNKIRERMKVLKDEVEKSVKQGGSSFQSIETLANHIL 448
[Close]
BLAST of CN186204 vs. ExPASy Swiss-Prot
Match: CNGT1_ARATH (Cytokinin-N-glucosyltransferase 1 OS=Arabidopsis thaliana GN=UGT76C1 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.190e-12
Identity = 31/67 (46.27%), Postives = 52/67 (77.61%), Query Frame = -1 
Query:  411 SDVWKVGLHLERKLERGEVERAIRRVMVDAEGREMRNRAEILKEKLDLCTKQGSFSYQSLENLISYI 611
            S+VW+VG+HLE ++ER E+ERA+ R+MV+++G E+R R ++L++++    KQG  SY+SL+ L+  I
Sbjct:  388 SEVWRVGIHLEGRIERREIERAVIRLMVESKGEEIRGRIKVLRDEVRRSVKQGGSSYRSLDELVDRI 454
The following BLAST results are available for this feature:
BLAST of CN186204 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
CNGT2_ARATH2.398e-1344.12Cytokinin-N-glucosyltransferase 2 OS=Arabidopsis t... [more]
CNGT1_ARATH1.190e-1246.27Cytokinin-N-glucosyltransferase 1 OS=Arabidopsis t... [more]
back to top
Properties
Property NameValue
Genbank descriptionUCRCS05_0002I12_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002I12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186204 ID=CN186204; Name=CN186204; organism=Citrus sinensis; type=EST; length=611bp
TTTTTTTTTTTTTTTTTCAAACCAACTCACGTCTTTATTCAGCTCACAAA
TACAAATCCGACTTTTGATTTCCTGTAAGGATCAGAAATATCCAACAAAT
GCACAAACTTCGGACACTGTTAATGCAAGAAGACTAGAAGAGAGTGCAGG
TCACTATCTTATCAGCTTTTTCTTCAACACCCCACAATTATTGCAAAAAA
AAAAAAAAAATCCCCTTAAACAATATAAACTTGGCCTTGCTACGGATTTT
GGATAAGTCCTTCAAGTTTCACTCCTTGGGTTGGGGAACGCTGATCACAT
AAATATTCAGAAAGATCTCATTGAATACGGCCGGGACATGCCATGTTTTA
ATTTTCATACTGCCCTTATTAGAAAGATAGATGTAAGTATTGGAAAATCT
AGTATGACAAAATGTAACTAATCAAGTTTTCTAGAGATTGATATGAAAAA
CTGCCTTGCTTTGTACAAAGATCCAGTTTTTCCTTCAGAATCTCAGCTCT
GTTCCTCATTTCCCGCCCCTCGGCATCCACCATTACTCTTCTAATTGCCC
TTTCAACCTCCCCTCTCTCCAGCTTCCTTTCCAAATGCAAACCAACTTTC
CAAACATCACT
back to top