EY665721

Overview
NameEY665721
Unique NameEY665721
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length888
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY665721 vs. ExPASy Swiss-Prot
Match: ATG2_USTMA (Autophagy-related protein 2 OS=Ustilago maydis GN=ATG2 PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.568e-13
Identity = 47/148 (31.76%), Postives = 71/148 (47.97%), Query Frame = 2 
Query:  158 LPFLEKFDIWPVFVRVDYTPSRVDLAALRGGKYVELVNLVPWKGVELKLKHVHTVGIYGWGGVCETVIGEWLEDISQNHIHKXXXXXXXXXXXXSCWFRGWKAGSLRAENYRKDKRGL*RGWKEVRLRFLEVLSLEAVGLGGNFGEGS 601
            LPF++  ++ P+ +++DY P RVD   LR GK +EL+N   ++G E+ L+HV   GI GW  + +T+   W  D+  N +              +          L  E Y KD R L RG +     F +  +LEAV LG     G+
Sbjct: 1775 LPFVQFAEVLPIKIKLDYKPKRVDYNLLRQGKTIELMNFFHFEGSEMVLRHVTLRGINGWARLFDTLNDIWTPDVKANQLADFLSGLGPIRSLVNVGAGLADLVLLPIEQYHKDGRVL-RGVQRGAAGFAKTTALEAVKLGARLATGT 1921
The following BLAST results are available for this feature:
BLAST of EY665721 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
ATG2_USTMA4.568e-1331.76Autophagy-related protein 2 OS=Ustilago maydis GN=... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-102-092-G12-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665721 ID=EY665721; Name=EY665721; organism=Citrus sinensis; type=EST; length=888bp
GTTCTGTATACTGGGTCGACCCACGCNNNNNCCNCNCNTCTNGANNAACA
ATGAGGAGGACCCTTCTTTCGGTTGTCNTNNNGATTTCTCTTTTAAAAGA
GAGNGGATGTTAAAGAGNAGAAANNNGGGGGGGNANANNANGGNGGAGGA
AGGANNGTTACCTTTTTTGGAGAAGTTTGATATATGGCCTGTTTTTGTTC
GGGTTGATTATACTCCAAGTCGTGTTGATCTAGCAGCATTAAGAGGTGGA
AAGTATGTGGAACTTGTAAATCTTGTGCCCTGGAAGGGGGTCGAGCTGAA
GCTTAAGCATGTTCACACTGTTGGCATCTATGGTTGGGGCGGTGTTTGTG
AAACAGTAATAGGCGAGTGGTTGGAAGATATTTCCCAGAATCATATTCAT
AAAGTGTTGCGAGGCCTGGTGGGGGGGGGGGGGGTTGGTAGCTGTTGGTT
CCGGGGCTGGAAAGCTGGTTCATTGCGAGCTGAGAACTATAGAAAGGATA
AGAGGGGACTGTAAAGGGGATGGAAAGAGGTACGATTGCGGTTTTTAGAA
GTATTATCGCTTGAAGCTGTTGGACTTGGGGGAAATTTTGGAGAAGGGAG
CTCATGATATTTTTGTTCAAGCAGAGTTTATTTTTAAAAGGGTAGATGAT
GGGGGCTGGGCGGGTAGCAAAAAAGTAGGGGGGAAAATGGTAGGGGAGAA
TGAAACGTAAAGGGGGGCCGACGGGGAATTGGAGAGGGATAATTAAGAGT
GCAAGAGGGTGGAGTAGGGGAGAGATTGGCTTTGAGGATGTGTTAGAAAG
GGCAATTGTGAATAAGGTAACAAAAGGGGGGGGAGAGGGGTTGGTGAATG
GTATTTGGGACATAGGAAGAAATGAGGGAGAATAGGAA
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