CV998096
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV998096 vs. ExPASy Swiss-Prot
Match: RSP41_ARATH (Arginine/serine-rich-splicing factor RSP41 OS=Arabidopsis thaliana GN=RSP41 PE=1 SV=2) HSP 1 Score: 204.142 bits (518), Expect = 8.849e-52 Identity = 102/142 (71.83%), Postives = 114/142 (80.28%), Query Frame = 1 Query: 481 GFAFIYMDDERDAEDAIRGLDRTEFGRKGRRLRVEWTKHEXXXXXXXXXXXXXXXXTNTRPSKTLFVINFDPYHTRTRDLERHFEPYGKIISVRIRRNFAFVQYEVQEDATRALDATNMSKLTDRVISVEYAVRDDDDRRNG 906 GFAF+YM+DERDAEDAIR LDR E+GR GRRLRVEWTK++ + RPSKTLFVINFD +TRTRDLERHFEPYGKI++VRIRRNFAF+QYE QEDATRALDATN SKL D+VISVEYAV+DDD R NG Sbjct: 36 GFAFVYMEDERDAEDAIRALDRFEYGRTGRRLRVEWTKNDRGGAGRSGGSRRSS--SGLRPSKTLFVINFDAQNTRTRDLERHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDATNSSKLMDKVISVEYAVKDDDSRGNG 175 HSP 2 Score: 75.485 bits (184), Expect = 4.722e-13 Identity = 31/39 (79.49%), Postives = 39/39 (100.00%), Query Frame = 3 Query: 51 MRPIFCGNFEYDARQSDLERLFRRYGKVDRVDMKSGFSW 167 M+P+FCGNFEYDAR+SDLERLFR+YGKV+RVDMK+GF++ Sbjct: 1 MKPVFCGNFEYDARESDLERLFRKYGKVERVDMKAGFAF 39
BLAST of CV998096 vs. ExPASy Swiss-Prot
Match: RSP40_ARATH (Arginine/serine-rich-splicing factor RSP40 OS=Arabidopsis thaliana GN=RSP40 PE=1 SV=2) HSP 1 Score: 203.756 bits (517), Expect = 1.156e-51 Identity = 103/142 (72.54%), Postives = 115/142 (80.99%), Query Frame = 1 Query: 481 GFAFIYMDDERDAEDAIRGLDRTEFGRKGRRLRVEWTKHEXXXXXXXXXXXXXXXXTNTRPSKTLFVINFDPYHTRTRDLERHFEPYGKIISVRIRRNFAFVQYEVQEDATRALDATNMSKLTDRVISVEYAVRDDDDRRNG 906 GFAF+YM+DERDAEDAIR LDR EFGRKGRRLRVEWTK E ++ RPSKTLFVINFD +TRTRDLE+HFEPYGKI++VRIRRNFAF+QYE QEDATRALDA+N SKL D+VISVEYAV+DDD R NG Sbjct: 36 GFAFVYMEDERDAEDAIRALDRFEFGRKGRRLRVEWTKSERGGDKRSGGGSRRSS-SSMRPSKTLFVINFDADNTRTRDLEKHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDASNNSKLMDKVISVEYAVKDDDARGNG 176 HSP 2 Score: 73.9442 bits (180), Expect = 1.374e-12 Identity = 30/39 (76.92%), Postives = 38/39 (97.44%), Query Frame = 3 Query: 51 MRPIFCGNFEYDARQSDLERLFRRYGKVDRVDMKSGFSW 167 M+P+FCGNFEYDAR+ DLERLFR+YGKV+RVDMK+GF++ Sbjct: 1 MKPVFCGNFEYDAREGDLERLFRKYGKVERVDMKAGFAF 39
BLAST of CV998096 vs. ExPASy Swiss-Prot
Match: RSP31_ARATH (Arginine/serine-rich-splicing factor RSP31 OS=Arabidopsis thaliana GN=RSP31 PE=1 SV=2) HSP 1 Score: 171.785 bits (434), Expect = 4.867e-42 Identity = 85/147 (57.82%), Postives = 107/147 (72.79%), Query Frame = 1 Query: 472 ISEGFAFIYMDDERDAEDAIRGLDRTEFGRKGRRLRVEWTKHEXXXXXXXXXXXXXXXXTNTRPSKTLFVINFDPYHTRTRDLERHFEPYGKIISVRIRRNFAFVQYEVQEDATRALDATNMSKLTDRVISVEYAVRDDDDR--RNG 906 + G+AF+Y +DERDAEDAIR LD FG + RRL VEW K E +N +P+KTLFVINFDP T+ D+E+HFEPYGK+ +VRIRRNF+FVQ+E QEDAT+AL+AT SK+ DRV+SVEYA++DDD+R RNG Sbjct: 33 MKSGYAFVYFEDERDAEDAIRKLDNFPFGYEKRRLSVEWAKGERGRPRGDAKAP-----SNLKPTKTLFVINFDPIRTKEHDIEKHFEPYGKVTNVRIRRNFSFVQFETQEDATKALEATQRSKILDRVVSVEYALKDDDERDDRNG 174 HSP 2 Score: 68.5514 bits (166), Expect = 5.772e-11 Identity = 29/39 (74.36%), Postives = 36/39 (92.31%), Query Frame = 3 Query: 51 MRPIFCGNFEYDARQSDLERLFRRYGKVDRVDMKSGFSW 167 MRP+F GNFEY+ RQSDLERLF +YG+VDRVDMKSG+++ Sbjct: 1 MRPVFVGNFEYETRQSDLERLFDKYGRVDRVDMKSGYAF 39 The following BLAST results are available for this feature:
BLAST of CV998096 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CV998096 ID=CV998096; Name=CV998096; organism=Citrus sinensis; type=EST; length=907bpback to top |