EY665718

Overview
NameEY665718
Unique NameEY665718
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length870
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY665718 vs. ExPASy Swiss-Prot
Match: YOCS_BACSU (Uncharacterized sodium-dependent transporter yocS OS=Bacillus subtilis GN=yocS PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.572e-16
Identity = 72/231 (31.17%), Postives = 109/231 (47.19%), Query Frame = 2 
Query:   62 QFVVKPILGYIFVTISVSVFGL--PTPIGAGIMLVSCVSGAQLSNYATFLTDPPLAPLSIVMTSLSTATAVFVTPLLSLLLIGKRLPVDVKGMVSSILQIVVVPIAAGLLLNRFFPRICNAIRPFLPPLSVLVTACCVGAPLAINIESVMSPFGXXXXXXXXXFHLSAFVAGYVVTGLAFAEAHDVKALQRTLSYETGMQSSLLALALTNRFFQDPLSECAASLSLQYSWH 748
            Q+ + P++ +         FGL  P  I  G++LV C  G   SN  TFL     A LS+ +T++ST  A  VTPLL +L   + LPV    +  SILQ V+ PI AGL++  FF +        LP +SV+     V A ++ N E+++   G          +   ++ G++   L   +       Q+ ++ E GMQ+S L  AL    F  PLS  A   ++   WH
Sbjct:   77 QYTIMPLVAFGLA------FGLHLPAEIAVGVILVGCCPGGTASNVMTFLAKGNTA-LSVAVTTISTLLAPVVTPLLIMLFAKEWLPVSPGSLFISILQAVLFPIIAGLIVKMFFRKQVAKAVHALPLVSVIGIVAIVSAVVSGNRENLLQS-GLLIFSVVILHNGIGYLLGFLCAKLLKMDYPS----QKAIAIEVGMQNSGLGAALATAHF-SPLS--AVPSAIFSVWH 292
The following BLAST results are available for this feature:
BLAST of EY665718 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
YOCS_BACSU5.572e-1631.17Uncharacterized sodium-dependent transporter yocS ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-102-092-G09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665718 ID=EY665718; Name=EY665718; organism=Citrus sinensis; type=EST; length=870bp
TGAGTACGGTCGGGAATTCCGGGTCGACCCCGCGTCCGGCTATTTTTGCT
GGTTATCTTTTCAATTTGTGGTGAAGCCTATTCTGGGATATATTTTTGTC
ACGATTTCAGTTTCAGTTTTTGGTCTTCCTACTCCCATAGGTGCAGGAAT
TATGTTGGTTTCTTGTGTTAGTGGGGCGCAGCTCTCAAATTATGCAACTT
TTCTGACAGACCCTCCACTGGCCCCCCTCAGCATTGTGATGACATCATTG
TCTACCGCTACTGCAGTTTTTGTTACGCCACTCTTATCACTCTTGCTTAT
TGGAAAGAGACTGCCTGTTGATGTAAAAGGAATGGTGTCCAGCATTTTGC
AGATTGTAGTTGTGCCAATTGCTGCAGGTTTGCTTTTGAATCGGTTTTTC
CCCCGCATTTGTAATGCTATTCGGCCATTCTTGCCTCCACTTTCAGTACT
TGTGACAGCTTGCTGTGTTGGAGCACCGCTTGCCATTAACATTGAGTCTG
TTATGTCCCCTTTTGGACTCACTATTTTGTTGCTCATTATTACATTTCAC
TTGTCAGCATTTGTTGCTGGTTATGTCGTTACTGGTTTGGCCTTCGCTGA
GGCACATGATGTGAAAGCACTGCAAAGAACCCTATCCTATGAGACAGGAA
TGCAGAGCAGTCTCCTGGCCCTGGCATTAACTAATAGATTTTTCCAAGAT
CCTCTAAGTGAGTGTGCCGCCAGCTTATCTCTACAGTATTCATGGCATTG
GATGGGCCTTCTTTCTTGTCATGGTTTTGGGGAAAAAAAAGTGAATAAAG
GGAAAAAAAAAGTTTTGCAACTGGTTATTTTACCCCAAATTTTTTCCTGG
GGAAAAAACTTTTTTGAAAT
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