EL492529
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EL492529 vs. ExPASy Swiss-Prot
Match: GLYC_CAEEL (Serine hydroxymethyltransferase OS=Caenorhabditis elegans GN=mel-32 PE=1 SV=2) HSP 1 Score: 116.701 bits (291), Expect = 3.728e-26 Identity = 62/117 (52.99%), Postives = 81/117 (69.23%), Query Frame = 1 Query: 1 VGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKK--LVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPG 345 +G++GAR E +LD+A I NKN+ PGD SAL PGGIR+G+PA+T+RGF E++F + DFIHEGV+I AKK G L+DF +F T N +VADL RVE +T+F IPG Sbjct: 391 IGVEGARAEHVLDLAHIACNKNTCPGDVSALRPGGIRLGTPALTSRGFQEQDFEKVGDFIHEGVQI---AKKYNAEAGKTLKDFKSF-TETNEPFKKDVADLAKRVEEFSTKFEIPG 503
BLAST of EL492529 vs. ExPASy Swiss-Prot
Match: GLYM_BOVIN (Serine hydroxymethyltransferase, mitochondrial OS=Bos taurus GN=SHMT2 PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 1.416e-25 Identity = 59/115 (51.30%), Postives = 81/115 (70.43%), Query Frame = 1 Query: 4 GIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKKLVQGSKLQDFMNF-VTSPNFSLMNNVADLRGRVEALTTQFPIPG 345 G+DGAR E++L++ SIT NKN+ PGD+SA+ PGG+R+G+PA+T+RGF E +F + FI EGV I LE K + +KLQDF +F + P S + +ADLR RVE FP+PG Sbjct: 390 GLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRGFLEDDFRKVVGFIDEGVNIGLEVKS--KTTKLQDFKSFLLKDPETS--HQLADLRQRVEQFARAFPMPG 500
BLAST of EL492529 vs. ExPASy Swiss-Prot
Match: GLYM_RABIT (Serine hydroxymethyltransferase, mitochondrial OS=Oryctolagus cuniculus GN=SHMT2 PE=1 SV=2) HSP 1 Score: 114.39 bits (285), Expect = 1.850e-25 Identity = 58/115 (50.43%), Postives = 82/115 (71.30%), Query Frame = 1 Query: 4 GIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKKLVQGSKLQDFMNF-VTSPNFSLMNNVADLRGRVEALTTQFPIPG 345 G+DGAR E++L++ SIT NKN+ PGD+SA+ PGG+R+G+PA+T+R F E +F + DFI EGV I LE K+ + +KLQDF +F + P S ++ADLR RV+ FP+PG Sbjct: 390 GLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVNIGLEVKR--KTAKLQDFKSFLLKDPETS--QHLADLRRRVQQFARAFPMPG 500
BLAST of EL492529 vs. ExPASy Swiss-Prot
Match: GLYM_ARATH (Serine hydroxymethyltransferase, mitochondrial OS=Arabidopsis thaliana GN=SHM1 PE=1 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 3.156e-25 Identity = 55/114 (48.25%), Postives = 81/114 (71.05%), Query Frame = 1 Query: 4 GIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPG 345 GIDG+RVEK+L+ I NKN+VPGD SA+VPGGIR+G+PA+T+RGF E++F +A++ + V I L+ K QG+KL+DF++ + S + ++ + +A LR VE QFP G Sbjct: 395 GIDGSRVEKVLEAVHIASNKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAEYFDKAVTIALKVKSEAQGTKLKDFVSAMESSS-TIQSEIAKLRHEVEEFAKQFPTIG 507
BLAST of EL492529 vs. ExPASy Swiss-Prot
Match: GLYM_HUMAN (Serine hydroxymethyltransferase, mitochondrial OS=Homo sapiens GN=SHMT2 PE=1 SV=3) HSP 1 Score: 113.235 bits (282), Expect = 4.121e-25 Identity = 56/114 (49.12%), Postives = 79/114 (69.30%), Query Frame = 1 Query: 4 GIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPG 345 G+DGAR E++L++ SIT NKN+ PGD+SA+ PGG+R+G+PA+T+R F E +F + DFI EGV I LE K + +KLQDF +F+ + +A+LR RVE FP+PG Sbjct: 390 GLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVNIGLEVKS--KTAKLQDFKSFLLKDS-ETSQRLANLRQRVEQFARAFPMPG 500
BLAST of EL492529 vs. ExPASy Swiss-Prot
Match: GLYM_SOLTU (Serine hydroxymethyltransferase, mitochondrial OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 5.383e-25 Identity = 57/114 (50.00%), Postives = 80/114 (70.18%), Query Frame = 1 Query: 4 GIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPG 345 GIDG+RVEK+L+ I NKN+VPGD SA+VPGGIR+G+PA+T+RGF E++FV +ADF V+I ++ K QG+KL+DF+ + S + + + +A LR VE QFP G Sbjct: 396 GIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFLEEDFVKVADFFDAAVKIAVKVKAETQGTKLKDFVATLES-SAPIKSEIAKLRHDVEEYAKQFPTIG 508
BLAST of EL492529 vs. ExPASy Swiss-Prot
Match: GLYC_CAEBR (Serine hydroxymethyltransferase OS=Caenorhabditis briggsae GN=mel-32 PE=3 SV=3) HSP 1 Score: 112.079 bits (279), Expect = 9.181e-25 Identity = 61/117 (52.14%), Postives = 79/117 (67.52%), Query Frame = 1 Query: 1 VGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKK--LVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPG 345 +G++GAR E ILD+A I NKN+ PGD SAL PGGIR+G+PA+T+RGF E++F + DFIHEGV+I AKK G L+DF F T+ N VA+L RVE + +F IPG Sbjct: 395 IGVEGARAEHILDLAHIACNKNTCPGDVSALRPGGIRLGTPALTSRGFKEQDFEKVGDFIHEGVQI---AKKYNAEAGKTLKDFKAF-TATNEQFKQEVAELAKRVEEFSGKFEIPG 507
BLAST of EL492529 vs. ExPASy Swiss-Prot
Match: GLYM_PEA (Serine hydroxymethyltransferase, mitochondrial OS=Pisum sativum PE=1 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 1.015e-23 Identity = 51/114 (44.74%), Postives = 81/114 (71.05%), Query Frame = 1 Query: 4 GIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPG 345 GIDG+RVEK+L++ I NKN+VPGD SA+VPGGIR+G+PA+T+RGF E++FV +A++ V + L+ K +G+KL+DF+ + + ++ + + ++ L+ VE QFP G Sbjct: 396 GIDGSRVEKVLELVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFVKVAEYFDAAVSLALKVKAESKGTKLKDFVEALQTSSY-VQSEISKLKHDVEEFAKQFPTIG 508
BLAST of EL492529 vs. ExPASy Swiss-Prot
Match: GLYN_FLAPR (Serine hydroxymethyltransferase 2, mitochondrial OS=Flaveria pringlei PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 4.265e-22 Identity = 53/114 (46.49%), Postives = 76/114 (66.67%), Query Frame = 1 Query: 4 GIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPG 345 GIDG+RVEK+L+ I NKN+VPGD SA+VPGGIR+G+PA+T+RGF E++F +A V++ ++ K QG+KL+DF+ + S F + ++ LR VE QFP G Sbjct: 396 GIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYLFDLAVKLAVKIKGEAQGTKLKDFVAAMQSSAF--QSEISKLRHDVEEYAKQFPTIG 507
BLAST of EL492529 vs. ExPASy Swiss-Prot
Match: GLYM_FLAPR (Serine hydroxymethyltransferase 1, mitochondrial OS=Flaveria pringlei PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 4.265e-22 Identity = 51/114 (44.74%), Postives = 78/114 (68.42%), Query Frame = 1 Query: 4 GIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPG 345 GIDG++VEK+L+ I NKN+VPGD SA+VPGGIR+G+PA+T+RGF E++F +A F V++ ++ K +G+KL+DF+ + S ++ + ++ LR VE QFP G Sbjct: 396 GIDGSKVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDLAVKLAVKIKGEAKGTKLKDFVTAMESS--AIQSEISKLRHDVEEYAKQFPTIG 507 The following BLAST results are available for this feature:
BLAST of EL492529 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 41
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Sequences
The
following sequences are available for this feature:
EST sequence >EL492529 ID=EL492529; Name=EL492529; organism=Citrus sinensis; type=EST; length=382bpback to top |