CV887369
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV887369 vs. ExPASy Swiss-Prot
Match: CNDH2_XENLA (Condensin-2 complex subunit H2 OS=Xenopus laevis GN=ncaph2 PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.835e-17 Identity = 51/128 (39.84%), Postives = 75/128 (58.59%), Query Frame = 1 Query: 70 SDVRFT--VQPERELQANWEVDLAKKLEDYLLKICSGQVTASESLDSISVNFAEAALLVQGSVQVYSRKVEYLYNLVLHALEFISQKSQQDQIEGTPVQAEESGSHAVAGEENDFFWGFDDVPVEVKN 447 ++ RFT +QP R+L NWEVD+A +L +YL ++ Q+ S ++NFAEAALL+QGS +YS+KVEYLY+LV AL+FIS K + Q E+ + + + F DD+ + N Sbjct: 4 AESRFTHLLQPVRDLTKNWEVDVAAQLGEYLEEL--DQICISFDGGKTTMNFAEAALLIQGSACIYSKKVEYLYSLVYQALDFISNKKRVQQPTSVGADGEDKDATFAHRNDEEEFLSLDDIDSKKTN 129
BLAST of CV887369 vs. ExPASy Swiss-Prot
Match: CNDH2_XENTR (Condensin-2 complex subunit H2 OS=Xenopus tropicalis GN=ncaph2 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.838e-16 Identity = 49/122 (40.16%), Postives = 72/122 (59.02%), Query Frame = 1 Query: 70 SDVRFT--VQPERELQANWEVDLAKKLEDYLLKICSGQVTASESLDSISVNFAEAALLVQGSVQVYSRKVEYLYNLVLHALEFISQKSQQDQIEGTPVQAEESGSHAVAGEENDFFWGFDDV 429 ++ RFT +QP R+L NWEVD+A +L +YL ++ Q+ S ++NFAEAALL+QGS +YS+KVEYLY+LV AL+FIS K + Q + + + + F DD+ Sbjct: 4 AESRFTHLLQPIRDLTKNWEVDVAAQLGEYLEEL--DQICISFDGGKTTMNFAEAALLIQGSACIYSKKVEYLYSLVYQALDFISNKKRDQQPASVGADGVDKDATFAHRNDEEEFLSLDDI 123
BLAST of CV887369 vs. ExPASy Swiss-Prot
Match: CNDH2_HUMAN (Condensin-2 complex subunit H2 OS=Homo sapiens GN=NCAPH2 PE=1 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.838e-16 Identity = 54/126 (42.86%), Postives = 74/126 (58.73%), Query Frame = 1 Query: 88 VQPERELQANWEVDLAKKLEDYLLKICSGQVTASESLDSISVNFAEAALLVQGSVQVYSRKVEYLYNLVLHALEFISQKSQQDQIEGTPV-QAEESGSHAVAGEENDFFWGFDDVP-----VEVKN 447 +QP R+L NWEVD+A +L +YL ++ Q+ S ++NF EAALL+QGS VYS+KVEYLY+LV AL+FIS K + Q+ +A S V E + F DD P V++KN Sbjct: 12 LQPIRDLTKNWEVDVAAQLGEYLEEL--DQICISFDEGKTTMNFIEAALLIQGSACVYSKKVEYLYSLVYQALDFISGKRRAKQLSSVQEDRANGVASSGVPQEAENEFLSLDDFPDSRTNVDLKN 135
BLAST of CV887369 vs. ExPASy Swiss-Prot
Match: CNDH2_MOUSE (Condensin-2 complex subunit H2 OS=Mus musculus GN=Ncaph2 PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 4.094e-16 Identity = 57/137 (41.61%), Postives = 78/137 (56.93%), Query Frame = 1 Query: 73 DVRFT--VQPERELQANWEVDLAKKLEDYLLKICSGQVTASESLDSISVNFAEAALLVQGSVQVYSRKVEYLYNLVLHALEFISQKSQQDQIEGTPVQAEESGSHAVAGEE-----NDFFWGFDDVP-----VEVKN 447 +VRF +QP R+L NWEVD+A +L +YL ++ Q+ S ++NF EAALL+QGS VYS+KVEYLY+LV AL+FIS K + Q+ +E GS E + F DD P V++KN Sbjct: 5 EVRFAHLLQPIRDLTKNWEVDVAAQLGEYLEEL--DQICISFDEGKTTMNFIEAALLIQGSACVYSKKVEYLYSLVYQALDFISGKRRAKQLS----LVQEDGSKKTVNSETPCETENEFLSLDDFPDSRANVDLKN 135
BLAST of CV887369 vs. ExPASy Swiss-Prot
Match: CNDH2_BOVIN (Condensin-2 complex subunit H2 OS=Bos taurus GN=NCAPH2 PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 4.094e-16 Identity = 50/113 (44.25%), Postives = 68/113 (60.18%), Query Frame = 1 Query: 94 PERELQANWEVDLAKKLEDYLLKICSGQVTASESLDSISVNFAEAALLVQGSVQVYSRKVEYLYNLVLHALEFISQKSQQDQIEGTPVQAEESGSHAVAGEE-NDFFWGFDDV 429 P R+L NWEVD+A +L +YL ++ Q+ S ++NF EAALL+QGS VYS+KVEYLY+LV AL+FIS K Q Q+ TP + + A +E F DD+ Sbjct: 14 PIRDLTRNWEVDVAAQLGEYLEEL--DQICISFDKGKTTMNFIEAALLIQGSACVYSKKVEYLYSLVYQALDFISGKKQAKQLSSTPEDGTIGDASSRAPQEAEQKFRALDDL 124
BLAST of CV887369 vs. ExPASy Swiss-Prot
Match: CNDH2_DANRE (Condensin-2 complex subunit H2 OS=Danio rerio GN=ncaph2 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.832e-14 Identity = 51/148 (34.46%), Postives = 84/148 (56.76%), Query Frame = 1 Query: 88 VQPERELQANWEVDLAKKLEDYLLKICSGQVTASESLDSISVNFAEAALLVQGSVQVYSRKVEYLYNLVLHALEFISQKSQQDQIEGTPVQAEESGSHAVAGEENDFFWGFDDVPVEVKNCLDSPNGKDTS--LNLFVKPPANLVVLE 525 +QP R+L NW++DLA +L +YL ++ Q+T S +NFAEAALL+QGS +Y RKVE L+ LV L++IS K+++ +G+ ++ + A +G E D FD++ + + KD + + + PP +L+ E Sbjct: 12 LQPLRDLTKNWDIDLASQLGEYLEEL--DQMTISFDGGKTMMNFAEAALLIQGSTCIYGRKVELLHTLVFQTLDYISNKNKKRDKQGS--SSDGNQEQAPSGSEGD-GCEFDEIEQDENVNTHNITMKDPTEPVRIIRLPPESLIPAE 154 The following BLAST results are available for this feature:
BLAST of CV887369 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CV887369 ID=CV887369; Name=CV887369; organism=Citrus sinensis; type=EST; length=848bpback to top |