CV887352

Overview
NameCV887352
Unique NameCV887352
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length851
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV887352 vs. ExPASy Swiss-Prot
Match: ANK1_HUMAN (Ankyrin-1 OS=Homo sapiens GN=ANK1 PE=1 SV=3)

HSP 1 Score: 75.485 bits (184), Expect = 4.262e-13
Identity = 60/198 (30.30%), Postives = 88/198 (44.44%), Query Frame = 2
Query:  293 QVNAK---DDTPLHVAAKFGHSDIVRFLVER------AKLTQHENEELESRVGAAWQIIRMTNKEKN---------TALHEAVCHQNVDVVEILTKEDPDYPYSANNYGKTPLYMAAESRSSNMVLALLENSASMSHDGPNGKTALHAAAKEFRFGDAAXXXXXXXXXXXXXETDQYGWTPIHYAAYHGNYKTINLLL 832
            +VNAK   D TPLH AA+ GH+++V+ L+E       A    H    + +R G    ++ +  KE +         T LH A  +  V V E+L + D  +P +A   G TPL++A    + ++V  LL    S      NG T LH AAK+                         G TP+H AA  G+ + + LLL
Sbjct:  462 KVNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDA-HPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQ---NQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLL 655          

HSP 2 Score: 75.0998 bits (183), Expect = 5.567e-13
Identity = 54/178 (30.34%), Postives = 84/178 (47.19%), Query Frame = 2
Query:  299 NAKDDTPLHVAAKFGHSDIVRFLVERAKLTQHENEELESRVGAAWQIIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNYGKTPLYMAAESRSSNMVLALLENSASMSHDGPNGKTALHAAAKEFRFGDAAXXXXXXXXXXXXXETDQYGWTPIHYAAYHGNYKTINLLL 832
            N K +TPLH+AA+ GH+++ ++L++            +++V A         K+  T LH A    + ++V++L + + + P  A   G TPL++AA       VLALLE  AS +     G T LH AAK   +G                   + G TP+H A +H N   + LLL
Sbjct:  434 NVKVETPLHMAARAGHTEVAKYLLQN-----------KAKVNAK-------AKDDQTPLHCAARIGHTNMVKLLLENNAN-PNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAK---YGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLL 589          

HSP 3 Score: 70.0922 bits (170), Expect = 1.791e-11
Identity = 60/198 (30.30%), Postives = 85/198 (42.93%), Query Frame = 2
Query:  254 VAEILEKCPLLLLQVNAKDDTPLHVAAKFGHSDIVRFLVERAKLTQHENEELESRVGAAWQIIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNYGKTPLYMAAESRSSNMVLALLENSASMSHDGPNGKTALHAAAKEFRFGDAAXXXXXXXXXXXXXETDQYGWTPIHYAAYHGNYKTINLLLETDQH 847
            V E+L K    +  V     TPLHVA+  GH  IV+ L++R       N ++E                  T LH A    + +V + L +        A +  +TPL+ AA    +NMV  LLEN+A+ +     G T LH AA+E   G                   + G+TP+H AA +G  +   LLLE D H
Sbjct:  386 VMELLLKTGASIDAVTESGLTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVE------------------TPLHMAARAGHTEVAKYLLQNKAKVNAKAKD-DQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAARE---GHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAH 561          
BLAST of CV887352 vs. ExPASy Swiss-Prot
Match: ANK1_MOUSE (Ankyrin-1 OS=Mus musculus GN=Ank1 PE=1 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.791e-11
Identity = 53/178 (29.78%), Postives = 80/178 (44.94%), Query Frame = 2
Query:  299 NAKDDTPLHVAAKFGHSDIVRFLVERAKLTQHENEELESRVGAAWQIIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNYGKTPLYMAAESRSSNMVLALLENSASMSHDGPNGKTALHAAAKEFRFGDAAXXXXXXXXXXXXXETDQYGWTPIHYAAYHGNYKTINLLL 832
            N K +TPLH+AA+ GH+++ ++L++            +++  A         K+  T LH A    +  +V++L  E+   P  A   G TPL+ AA     +  LALLE  AS +     G T LH AAK   +G                   + G TP+H A +H N   + LLL
Sbjct:  430 NVKVETPLHMAARAGHTEVAKYLLQN-----------KAKANAK-------AKDDQTPLHCAARIGHTGMVKLLL-ENGASPNLATTAGHTPLHTAAREGHVDTALALLEKEASQACMTKKGFTPLHVAAK---YGKVRLAELLLEHDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLL 585          

HSP 2 Score: 69.707 bits (169), Expect = 2.339e-11
Identity = 61/193 (31.61%), Postives = 88/193 (45.60%), Query Frame = 2
Query:  302 AKDD-TPLHVAAKFGHSDIVRFLVER------AKLTQHENEELESRVGAAWQIIRMTNKEKN---------TALHEAVCHQNVDVVEILTKEDPDYPYSANNYGKTPLYMAAESRSSNMVLALLENSASMSHDGPNGKTALHAAAKEFRFGDAAXXXXXXXXXXXXXETDQYGWTPIHYAAYHGNYKTINLLL 832
            AKDD TPLH AA+ GH+ +V+ L+E       A    H      +R G     + +  KE +         T LH A  +  V + E+L + D  +P +A   G TPL++A    + ++V  LL    S      NG T LH AAK+ +   A              E+ Q G TP+H AA  G+ + + LLL
Sbjct:  463 AKDDQTPLHCAARIGHTGMVKLLLENGASPNLATTAGHTPLHTAAREGHVDTALALLEKEASQACMTKKGFTPLHVAAKYGKVRLAELLLEHDA-HPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQIEVA--RSLLQYGGSANAESVQ-GVTPLHLAAQEGHTEMVALLL 651          

HSP 3 Score: 67.781 bits (164), Expect = 8.887e-11
Identity = 60/198 (30.30%), Postives = 83/198 (41.92%), Query Frame = 2
Query:  254 VAEILEKCPLLLLQVNAKDDTPLHVAAKFGHSDIVRFLVERAKLTQHENEELESRVGAAWQIIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNYGKTPLYMAAESRSSNMVLALLENSASMSHDGPNGKTALHAAAKEFRFGDAAXXXXXXXXXXXXXETDQYGWTPIHYAAYHGNYKTINLLLETDQH 847
            V E+L K    +  V     TPLHVA+  GH  IV+ L++R       N ++E                  T LH A    + +V + L +        A +  +TPL+ AA    + MV  LLEN AS +     G T LH AA+E     A              +    G+TP+H AA +G  +   LLLE D H
Sbjct:  382 VMELLLKTGASIDAVTESGLTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVE------------------TPLHMAARAGHTEVAKYLLQNKAKANAKAKD-DQTPLHCAARIGHTGMVKLLLENGASPNLATTAGHTPLHTAAREGHVDTALALLEKEASQACMTKK---GFTPLHVAAKYGKVRLAELLLEHDAH 557          
BLAST of CV887352 vs. ExPASy Swiss-Prot
Match: ANK3_HUMAN (Ankyrin-3 OS=Homo sapiens GN=ANK3 PE=1 SV=3)

HSP 1 Score: 68.9366 bits (167), Expect = 3.989e-11
Identity = 58/197 (29.44%), Postives = 95/197 (48.22%), Query Frame = 2
Query:  290 LQVNAKDD-TPLHVAAKFGHSDIVRFLVER------AKLTQHENEELESRVG----AAWQI-----IRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNYGKTPLYMAAESRSSNMVLALLENSASMSHDGPNGKTALHAAAKEFRFGDAAXXXXXXXXXXXXXETDQYGWTPIHYAAYHGNYKTINLLL 832
            ++  AKDD TPLH++A+ G +DIV+ L+++      A  + +    L +R G    AA+ +     + +T K+  T LH A  +  ++V  +L ++    P +A   G TPL++AA   +  + L LL+  AS      NG T LH AAK+ +   A                 + G   +H AA  G+   ++LLL
Sbjct:  492 VEAKAKDDQTPLHISARLGKADIVQQLLQQGASPNAATTSGYTPLHLSAREGHEDVAAFLLDHGASLSITTKKGFTPLHVAAKYGKLEVANLLLQKSAS-PDAAGKSGLTPLHVAAHYDNQKVALLLLDQGASPHAAAKNGYTPLHIAAKKNQMDIAT---TLLEYGADANAVTRQGIASVHLAAQEGHVDMVSLLL 684          
The following BLAST results are available for this feature:
BLAST of CV887352 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
ANK1_HUMAN4.262e-1330.30Ankyrin-1 OS=Homo sapiens GN=ANK1 PE=1 SV=3[more]
ANK1_MOUSE1.791e-1129.78Ankyrin-1 OS=Mus musculus GN=Ank1 PE=1 SV=2[more]
ANK3_HUMAN3.989e-1129.44Ankyrin-3 OS=Homo sapiens GN=ANK3 PE=1 SV=3[more]
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Properties
Property NameValue
Genbank descriptionUCRCS04_2_030G07_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_030_T3_G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV887352 ID=CV887352; Name=CV887352; organism=Citrus sinensis; type=EST; length=851bp
GTAATAGATCAACTTCGCCAAAATGAATCCTGTTTCCATTGAGATTGAGG
AAGCTCCGTTATTGGACAGCAATCGTGAAATTAAGCAGCAAATGGACCCA
ATTTTTTTCAACGCTGCAGCTGCGGGCAATTCGGAACCGTTCAAAGATAT
GGCAGGAGAGGAAATTAAGAGCTTGTTAACAGCAAAGACCGAAAACACAA
TCCTGCATATCAACATCATATCCCAAGAAAGGGAAAACGTGTCAACGAAG
TTCGTAGCAGAAATACTTGAGAAATGCCCATTGCTGCTACTACAAGTTAA
TGCCAAAGACGATACTCCACTTCACGTTGCGGCAAAATTCGGCCATTCTG
ATATAGTGAGGTTTCTTGTCGAAAGAGCAAAATTAACTCAACATGAAAAT
GAAGAGCTAGAGAGCAGGGTAGGAGCTGCCTGGCAGATTATTAGGATGAC
AAATAAGGAGAAGAATACAGCACTCCACGAGGCAGTGTGTCACCAAAACG
TCGATGTGGTGGAAATACTGACGAAAGAAGACCCTGATTATCCATATTCT
GCAAATAATTACGGCAAAACGCCACTCTACATGGCTGCTGAGTCTCGGTC
TTCTAATATGGTGCTTGCCTTATTGGAAAACAGCGCATCAATGTCTCATG
ATGGCCCCAACGGAAAGACGGCTTTACATGCTGCAGCAAAGGAATTTCGT
TTCGGTGATGCTGCATTACCAAAATTACTTGAGAAAAAGAAGAATCTGAT
CAAAGAAACAGACCAATATGGGTGGACTCCAATTCATTACGCTGCATATC
ATGGAAATTACAAGACGATAAATTTGCTATTAGAAACCGATCAACATGCT
T
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