EL492523
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EL492523 vs. ExPASy Swiss-Prot
Match: R13A4_ARATH (60S ribosomal protein L13a-4 OS=Arabidopsis thaliana GN=RPL13AD PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 6.130e-21 Identity = 45/51 (88.24%), Postives = 47/51 (92.16%), Query Frame = 1 Query: 40 YEGVPAPYDKTKRMVIPDALKVLRLQKGHKYCLLGRLSSEVGWNYYDTITQ 192 YEGVP PYDK KRMVIPDALKVLRLQ GHKYCLLGRLSSEVGWN+YDTI + Sbjct: 110 YEGVPTPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKE 160
BLAST of EL492523 vs. ExPASy Swiss-Prot
Match: RL13A_LUPLU (60S ribosomal protein L13a OS=Lupinus luteus GN=RPL13A PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 1.366e-20 Identity = 42/51 (82.35%), Postives = 48/51 (94.12%), Query Frame = 1 Query: 40 YEGVPAPYDKTKRMVIPDALKVLRLQKGHKYCLLGRLSSEVGWNYYDTITQ 192 YEG+P P+DK KR+V+PDALKVLRLQKGHKYCLLG+LSSEVGWNYYDTI + Sbjct: 109 YEGIPPPFDKQKRLVVPDALKVLRLQKGHKYCLLGQLSSEVGWNYYDTIKE 159
BLAST of EL492523 vs. ExPASy Swiss-Prot
Match: R13A2_ARATH (60S ribosomal protein L13a-2 OS=Arabidopsis thaliana GN=RPL13AB PE=1 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 1.783e-20 Identity = 44/51 (86.27%), Postives = 47/51 (92.16%), Query Frame = 1 Query: 40 YEGVPAPYDKTKRMVIPDALKVLRLQKGHKYCLLGRLSSEVGWNYYDTITQ 192 +EGVP PYDK KRMVIPDALKVLRLQ GHKYCLLGRLSSEVGWN+YDTI + Sbjct: 110 FEGVPPPYDKVKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKE 160
BLAST of EL492523 vs. ExPASy Swiss-Prot
Match: R13A3_ARATH (60S ribosomal protein L13a-3 OS=Arabidopsis thaliana GN=RPL13AC PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 2.329e-20 Identity = 43/51 (84.31%), Postives = 47/51 (92.16%), Query Frame = 1 Query: 40 YEGVPAPYDKTKRMVIPDALKVLRLQKGHKYCLLGRLSSEVGWNYYDTITQ 192 +EG+P PYDK KRMVIPDALKVLRLQ GHKYCLLGRLSSEVGWN+YDTI + Sbjct: 110 FEGIPPPYDKIKRMVIPDALKVLRLQSGHKYCLLGRLSSEVGWNHYDTIKE 160
BLAST of EL492523 vs. ExPASy Swiss-Prot
Match: R13A1_ARATH (60S ribosomal protein L13a-1 OS=Arabidopsis thaliana GN=RPL13AA PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 2.329e-20 Identity = 43/51 (84.31%), Postives = 47/51 (92.16%), Query Frame = 1 Query: 40 YEGVPAPYDKTKRMVIPDALKVLRLQKGHKYCLLGRLSSEVGWNYYDTITQ 192 +EGVP PYDK KRMV+PDALKVLRLQ GHKYCLLGRLSSEVGWN+YDTI + Sbjct: 110 FEGVPTPYDKIKRMVVPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKE 160
BLAST of EL492523 vs. ExPASy Swiss-Prot
Match: RL13A_PICMA (60S ribosomal protein L13a OS=Picea mariana GN=RPL13A PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 3.363e-19 Identity = 41/51 (80.39%), Postives = 47/51 (92.16%), Query Frame = 1 Query: 40 YEGVPAPYDKTKRMVIPDALKVLRLQKGHKYCLLGRLSSEVGWNYYDTITQ 192 +EGVP PYD+ KRMVIPDALKVLRLQ GHKYCLLGRLS EVGW+++DTIT+ Sbjct: 110 FEGVPPPYDRKKRMVIPDALKVLRLQPGHKYCLLGRLSKEVGWHHFDTITE 160
BLAST of EL492523 vs. ExPASy Swiss-Prot
Match: RL16_NEUCR (60S ribosomal protein L16 OS=Neurospora crassa GN=rpl-16 PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 8.573e-15 Identity = 33/51 (64.71%), Postives = 42/51 (82.35%), Query Frame = 1 Query: 40 YEGVPAPYDKTKRMVIPDALKVLRLQKGHKYCLLGRLSSEVGWNYYDTITQ 192 +EGVP PYDK K+MV+P AL+VLRLQ G K+C +GRLSSEVGW Y D +++ Sbjct: 107 FEGVPPPYDKKKKMVVPQALRVLRLQPGRKFCTVGRLSSEVGWKYEDVVSR 157
BLAST of EL492523 vs. ExPASy Swiss-Prot
Match: RL13A_CYAPA (60S ribosomal protein L13a OS=Cyanophora paradoxa PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.910e-14 Identity = 33/51 (64.71%), Postives = 43/51 (84.31%), Query Frame = 1 Query: 40 YEGVPAPYDKTKRMVIPDALKVLRLQKGHKYCLLGRLSSEVGWNYYDTITQ 192 +EGVP PYDK KRMVIP AL+VLRL+ G K+C+LGRL++EVGW + D +T+ Sbjct: 104 FEGVPPPYDKMKRMVIPQALRVLRLKPGRKFCVLGRLATEVGWRHSDLVTR 154
BLAST of EL492523 vs. ExPASy Swiss-Prot
Match: RL16A_SCHPO (60S ribosomal protein L16-A OS=Schizosaccharomyces pombe GN=rpl16a PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.112e-13 Identity = 31/50 (62.00%), Postives = 41/50 (82.00%), Query Frame = 1 Query: 43 EGVPAPYDKTKRMVIPDALKVLRLQKGHKYCLLGRLSSEVGWNYYDTITQ 192 EG+P P+DK KR+V+P AL+VLRL+ G KYC +GRLSSEVGW Y D +++ Sbjct: 107 EGIPPPFDKQKRVVVPAALRVLRLKPGRKYCTVGRLSSEVGWKYSDIVSK 156
BLAST of EL492523 vs. ExPASy Swiss-Prot
Match: RL16B_SCHPO (60S ribosomal protein L16-B OS=Schizosaccharomyces pombe GN=rpl16b PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.758e-13 Identity = 31/50 (62.00%), Postives = 40/50 (80.00%), Query Frame = 1 Query: 43 EGVPAPYDKTKRMVIPDALKVLRLQKGHKYCLLGRLSSEVGWNYYDTITQ 192 EG+P P+DK KR+V+P AL+VLRL+ G KYC +GRLSSEVGW Y D + + Sbjct: 107 EGIPPPFDKQKRVVVPAALRVLRLKPGRKYCTVGRLSSEVGWKYNDIVAK 156 The following BLAST results are available for this feature:
BLAST of EL492523 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >EL492523 ID=EL492523; Name=EL492523; organism=Citrus sinensis; type=EST; length=203bpback to top |