CV887346

Overview
NameCV887346
Unique NameCV887346
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length605
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV887346 vs. ExPASy Swiss-Prot
Match: DRL3_ARATH (Probable disease resistance protein At1g15890 OS=Arabidopsis thaliana GN=At1g15890 PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 1.562e-33
Identity = 80/209 (38.28%), Postives = 121/209 (57.89%), Query Frame = 1
Query:    1 LSKEEAFNLFIDGVGSSILQ----VPTLNKEIINEVVEECGCLPLAIVTVAASMSGEEEIYEWQNALNELRGRLRSLNDVDTKVFGRLEFSYHRLKDEKLQQCFLYCALYPEDFAIPKDELIDHWIAEGFIEEVKDVQAKYDRGHTILNRLVNCCLLESVEDGGCVKMHDLIRDMALRITS----KSPLFMVKVGLRLQEFPSEQEWKA 603
            L  +EA+ LF   VG   LQ    +PTL ++    V E+C  LPLA+  +  +M+  E + EWQ+ ++ L         ++ K+   L+FSY  LKDEK++ CFLYC+L+PED+ + K+ELI++W+ EGFI+  +D     ++GH I+  LV   LL   E    VKMHD+IR+MAL I S    +     VK G++L   P +  W++
Sbjct:  380 LPPDEAWELFQKKVGPIPLQSHEDIPTLARK----VAEKCCGLPLALSVIGKAMASRETVQEWQHVIHVLNSSSHEFPSMEEKILPVLKFSYDDLKDEKVKLCFLYCSLFPEDYEVRKEELIEYWMCEGFIDGNEDEDGANNKGHDIIGSLVRAHLLMDGELTTKVKMHDVIREMALWIASNFGKQKETLCVKPGVQLCHIPKDINWES 584          
BLAST of CV887346 vs. ExPASy Swiss-Prot
Match: DRL15_ARATH (Probable disease resistance protein At1g61180 OS=Arabidopsis thaliana GN=At1g61180 PE=2 SV=2)

HSP 1 Score: 139.813 bits (351), Expect = 1.013e-32
Identity = 75/205 (36.59%), Postives = 119/205 (58.05%), Query Frame = 1
Query:    1 LSKEEAFNLFIDGVGSSILQVPTLNKEIINEVVEECGCLPLAIVTVAASMSGEEEIYEWQNALNELRGRLRSLNDVDTKVFGRLEFSYHRLKDEKLQQCFLYCALYPEDFAIPKDELIDHWIAEGFIEEVKDVQAKYDRGHTILNRLVNCCLLESVEDGGCVKMHDLIRDMALRITS----KSPLFMVKVGLRLQEFPSEQEWKA 603
            L  E+A+ LF + VG + L    +  E+  EV ++C  LPLA+  +  +MS +  + EW++A++         +D+  K+   L++SY  L DE ++ CFLYCAL+PED  I  ++LID+WI EGFI E + ++   ++G+ +L  L    LL  V    CV MHD++R+MAL I S    +   F+V+ G+ L E P  ++W A
Sbjct:  309 LEPEDAWELFKNKVGDNTLSSDPVIVELAREVAQKCRGLPLALNVIGETMSSKTMVQEWEHAIHVFNTSAAEFSDMQNKILPILKYSYDSLGDEHIKSCFLYCALFPEDGEIYNEKLIDYWICEGFIGEDQVIKRARNKGYAMLGTLTRANLLTKVGTYYCV-MHDVVREMALWIASDFGKQKENFVVQAGVGLHEIPKVKDWGA 512          
BLAST of CV887346 vs. ExPASy Swiss-Prot
Match: RPS5_ARATH (Disease resistance protein RPS5 OS=Arabidopsis thaliana GN=RPS5 PE=1 SV=2)

HSP 1 Score: 130.954 bits (328), Expect = 4.704e-30
Identity = 69/204 (33.82%), Postives = 120/204 (58.82%), Query Frame = 1
Query:    1 LSKEEAFNLFIDGVGSSILQVPTLNKEIINEVVEECGCLPLAIVTVAASMSGEEEIYEWQNALNELRGRLRSLNDVDTKVFGRLEFSYHRLKDEKLQQCFLYCALYPEDFAIPKDELIDHWIAEGFIEEVKDVQAKYDRGHTILNRLVNCC-LLESVEDGGCVKMHDLIRDMALRITS----KSPLFMVKVGLRLQEFPSEQEW 597
            L  EE+++LF   VG + L        +  +V  +C  LPLA+  +  +M+ +  ++EW +A++ L       + ++ ++   L++SY  L  E ++ CFLYC+L+PED+ I K+ L+D+WI+EGFI E +  +   ++G+ I+  LV  C LLE   +   VKMHD++R+MAL I+S    +    +V+ G+ L+E P  ++W
Sbjct:  313 LQPEESWDLFQMKVGKNTLGSHPDIPGLARKVARKCRGLPLALNVIGEAMACKRTVHEWCHAIDVLTSSAIDFSGMEDEILHVLKYSYDNLNGELMKSCFLYCSLFPEDYLIDKEGLVDYWISEGFINEKEGRERNINQGYEIIGTLVRACLLLEEERNKSNVKMHDVVREMALWISSDLGKQKEKCIVRAGVGLREVPKVKDW 516          
BLAST of CV887346 vs. ExPASy Swiss-Prot
Match: DRL17_ARATH (Probable disease resistance protein At1g61300 OS=Arabidopsis thaliana GN=At1g61300 PE=2 SV=2)

HSP 1 Score: 130.183 bits (326), Expect = 8.025e-30
Identity = 72/205 (35.12%), Postives = 119/205 (58.05%), Query Frame = 1
Query:    1 LSKEEAFNLFIDGVGSSILQVPTLNKEIINEVVEECGCLPLAIVTVAASMSGEEEIYEWQNALNELRGRLRSLNDVDTKVFGRLEFSYHRLKDEKLQQCFLYCALYPEDFAIPKDELIDHWIAEGFIEEVKDVQAKYDRGHTILNRLVNCCLLESVEDGGCVKMHDLIRDMALRITS----KSPLFMVKVGLRLQEFPSEQEWKA 603
            L  E+A+ LF + VG + L+   +  E+  EV ++C  LPLA+  +  +M+ +  + EW++A++ L       +++  K+   L++SY  L DE ++ CFLYCAL+PED  I  ++LID+WI EGFI E + ++   ++G+ +L  L    LL  V     V MHD++R+MAL I S    +   F+V+  + L E P  ++W A
Sbjct:  198 LEPEDAWELFKNKVGDNTLRSDPVIVELAREVAQKCRGLPLALSVIGETMASKTMVQEWEHAIDVLTRSAAEFSNMGNKILPILKYSYDSLGDEHIKSCFLYCALFPEDDEIYNEKLIDYWICEGFIGEDQVIKRARNKGYEMLGTLTLANLLTKVGTEHVV-MHDVVREMALWIASDFGKQKENFVVRARVGLHERPEAKDWGA 401          
BLAST of CV887346 vs. ExPASy Swiss-Prot
Match: DRL40_ARATH (Probable disease resistance protein At5g63020 OS=Arabidopsis thaliana GN=At5g63020 PE=2 SV=2)

HSP 1 Score: 129.798 bits (325), Expect = 1.048e-29
Identity = 73/208 (35.10%), Postives = 123/208 (59.13%), Query Frame = 1
Query:    1 LSKEEAFNLFIDGVGSSIL----QVPTLNKEIINEVVEECGCLPLAIVTVAASMSGEEEIYEWQNALNELRGRLRSLNDVDTKVFGRLEFSYHRLKDEKLQQCFLYCALYPEDFAIPKDELIDHWIAEGFIEEVKDVQAKYDRGHTILNRLVNCCLLESVEDGGCVKMHDLIRDMALRITS----KSPLFMVKVGLRLQEFPSEQEWK 600
            L+ ++A++LF   VG   L    ++PT    +   V ++C  LPLA+  +  +M+ +  + EW++A++ L       + ++ ++   L++SY  LK E+L+ CF YCAL+PED  I K++L+D+WI EGFI+  K      ++G+ I+  LV  CLL   E+   VKMHD++R+MAL I S    +   F+V+ GL+ +  P  ++WK
Sbjct:  311 LAPDDAWDLFTKKVGEITLGSHPEIPT----VARTVAKKCRGLPLALNVIGETMAYKRTVQEWRSAIDVLTSSAAEFSGMEDEILPILKYSYDNLKSEQLKLCFQYCALFPEDHNIEKNDLVDYWIGEGFIDRNKG--KAENQGYEIIGILVRSCLLME-ENQETVKMHDVVREMALWIASDFGKQKENFIVQAGLQSRNIPEIEKWK 511          
BLAST of CV887346 vs. ExPASy Swiss-Prot
Match: DRL16_ARATH (Probable disease resistance protein At1g61190 OS=Arabidopsis thaliana GN=At1g61190 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 2.335e-29
Identity = 72/209 (34.45%), Postives = 119/209 (56.94%), Query Frame = 1
Query:    1 LSKEEAFNLFIDGVGSSILQVPTLNKEIINEVVEECGCLPLAIVTVAASMSGEEEIYEWQNALNELRGRLRSLNDVDTKVFGRLEFSYHRLKDEKLQQCFLYCALYPEDFAIPKDELIDHWIAEGFIEEVKDVQAKYDRGHTILNRLVNCCLLESVEDGGCVK----MHDLIRDMALRITS----KSPLFMVKVGLRLQEFPSEQEWKA 603
            L  E+A+ LF + VG + L+   +   +  EV ++C  LPLA+  +  +M+ +  + EW++A++ L       +D+  K+   L++SY  L+DE ++ CFLYCAL+PED  I    LI+ WI EGFI E + ++   ++G+ +L  L+   LL    D G VK    MHD++R+MAL I S    +   ++V+  + L E P  ++W A
Sbjct:  310 LEPEDAWELFKNKVGDNTLRSDPVIVGLAREVAQKCRGLPLALSCIGETMASKTMVQEWEHAIDVLTRSAAEFSDMQNKILPILKYSYDSLEDEHIKSCFLYCALFPEDDKIDTKTLINKWICEGFIGEDQVIKRARNKGYEMLGTLIRANLL--TNDRGFVKWHVVMHDVVREMALWIASDFGKQKENYVVRARVGLHEIPKVKDWGA 516          
BLAST of CV887346 vs. ExPASy Swiss-Prot
Match: DRL28_ARATH (Probable disease resistance protein At4g27220 OS=Arabidopsis thaliana GN=At4g27220 PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 5.201e-29
Identity = 74/200 (37.00%), Postives = 118/200 (59.00%), Query Frame = 1
Query:    1 LSKEEAFNLFIDGVGSSILQVPTLNKEIINEVVEECGCLPLAIVTVAASMSGEEEIYEWQNALNELRGRLRSLNDVDTKVFGRLEFSYHRLKDEKLQQCFLYCALYPEDFAIPKDELIDHWIAEGFIEEVKDVQAKYDRGHTILNRLVNCCLLESVEDGGCVKMHDLIRDMAL-RITSKSPLF--MVKVGLRLQEFPSEQ 591
            L ++EA+ LF   VG          K I  +V  EC  LPLAI+T+  ++ G+ ++  W++ LN L+    S+ D + K+FG L+ SY  L+D  ++ CFL+CAL+PED++I   ELI +W+AEG ++     +   + G T++ RL + CLLE  +    VKMHD++RD A+  ++S+   F  +V  G  L EFP ++
Sbjct:  272 LQEKEAWELFCHNVGEVANSDNV--KPIAKDVSHECCGLPLAIITIGRTLRGKPQVEVWKHTLNLLKRSAPSI-DTEEKIFGTLKLSYDFLQDN-MKSCFLFCALFPEDYSIKVSELIMYWVAEGLLDGQHHYEDMMNEGVTLVERLKDSCLLEDGDSCDTVKMHDVVRDFAIWFMSSQGEGFHSLVMAGRGLIEFPQDK 467          
BLAST of CV887346 vs. ExPASy Swiss-Prot
Match: DRL23_ARATH (Putative disease resistance protein At4g10780 OS=Arabidopsis thaliana GN=At4g10780 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 8.872e-29
Identity = 73/206 (35.44%), Postives = 115/206 (55.83%), Query Frame = 1
Query:    1 LSKEEAFNLFIDGVGSSILQVPTLNKEIINEVVEECGCLPLAIVTVAASMSGEEEIYEWQNALNELRGRLRSLNDVDTKVFGRLEFSYHRLKDEKLQQCFLYCALYPEDFAIPKDELIDHWIAEGFIEEVKDVQAKYDRGHTILNRLVNCCLL-ESVEDGGCVKMHDLIRDMALRITS----KSPLFMVKVGLRLQEFPSEQEWKA 603
            LS  +A+ LF + VG   L       E+  +V  +C  LPLA+  +  +M+G+  + EW +A++ L       + +D  +   L++SY  L D+ ++ CF YCALYPED++I K  LID+WI EGFI+     +   ++G+ IL  LV  CLL E  ++   VKMHD++R+MAL   S         +V+ G  L++ P  ++W A
Sbjct:  310 LSTNDAWELFQEKVGQISLGSHPDILELAKKVAGKCRGLPLALNVIGETMAGKRAVQEWHHAVDVLTSYAAEFSGMDDHILLILKYSYDNLNDKHVRSCFQYCALYPEDYSIKKYRLIDYWICEGFIDGNIGKERAVNQGYEILGTLVRACLLSEEGKNKLEVKMHDVVREMALWTLSDLGKNKERCIVQAGSGLRKVPKVEDWGA 515          
BLAST of CV887346 vs. ExPASy Swiss-Prot
Match: DRL1_ARATH (Probable disease resistance protein At1g12280 OS=Arabidopsis thaliana GN=At1g12280 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 8.872e-29
Identity = 72/206 (34.95%), Postives = 118/206 (57.28%), Query Frame = 1
Query:    1 LSKEEAFNLFIDGVGSSILQVPTLNKEIINEVVEECGCLPLAIVTVAASMSGEEEIYEWQNALNELRGRLRSLNDVDTKVFGRLEFSYHRLKDEKLQQCFLYCALYPEDFAIPKDELIDHWIAEGFIEEVKDVQAKYDRGHTILNRLVNCC-LLESVEDGGCVKMHDLIRDMALRITS----KSPLFMVKVGLRLQEFPSEQEWKA 603
            L   EA+ LF   VG + L+      E+  +V  +C  LPLA+  +  +M+ +  + EW+NA++ L         ++ ++   L++SY  L  E+++ CFLYC+L+PED+ + K+ LID+WI EGFI+E +  +    +G+ I+  LV  C LLE   +   VKMHD++R+MAL I S         +V+VG+ L+E P  + W +
Sbjct:  313 LEPNEAWELFQMKVGENTLKGHPDIPELARKVAGKCCGLPLALNVIGETMACKRMVQEWRNAIDVLSSYAAEFPGME-QILPILKYSYDNLNKEQVKPCFLYCSLFPEDYRMEKERLIDYWICEGFIDENESRERALSQGYEIIGILVRACLLLEEAINKEQVKMHDVVREMALWIASDLGEHKERCIVQVGVGLREVPKVKNWSS 517          
BLAST of CV887346 vs. ExPASy Swiss-Prot
Match: DRL20_ARATH (Probable disease resistance protein At1g63360 OS=Arabidopsis thaliana GN=At1g63360 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.159e-28
Identity = 72/206 (34.95%), Postives = 115/206 (55.83%), Query Frame = 1
Query:    1 LSKEEAFNLFIDGVGSSILQVPTLNKEIINEVVEECGCLPLAIVTVAASMSGEEEIYEWQNALNELRGRLRSLNDVDTKVFGRLEFSYHRLKDEKLQQCFLYCALYPEDFAIPKDELIDHWIAEGFIEEVKDVQAKYDRGHTILNRLVNCCLLESVEDGG---CVKMHDLIRDMALRITS----KSPLFMVKVGLRLQEFPSEQEW 597
            L +  AF+LF   VG + L       ++   V ++C  LPLA+  +  +MS +  I EW++A++ L         ++ KV   L++SY  LK E+++   LYCALYPED  I K++LI+HWI E  I+  + ++   D+G+ I+  LV   LL   +DG     V MHD++R+MAL I S    +   F+V+ G+ ++E P  + W
Sbjct:  309 LEENVAFDLFQKKVGQTTLGSDPGIPQLARIVAKKCCGLPLALNVIGETMSCKRTIQEWRHAIHVLNSYAAEFIGMEDKVLPLLKYSYDNLKGEQVKSSLLYCALYPEDAKILKEDLIEHWICEEIIDGSEGIEKAEDKGYEIIGCLVRASLLMEWDDGDGRRAVCMHDVVREMALWIASELGIQKEAFIVRAGVGVREIPKIKNW 514          
The following BLAST results are available for this feature:
BLAST of CV887346 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
DRL3_ARATH1.562e-3338.28Probable disease resistance protein At1g15890 OS=A... [more]
DRL15_ARATH1.013e-3236.59Probable disease resistance protein At1g61180 OS=A... [more]
RPS5_ARATH4.704e-3033.82Disease resistance protein RPS5 OS=Arabidopsis tha... [more]
DRL17_ARATH8.025e-3035.12Probable disease resistance protein At1g61300 OS=A... [more]
DRL40_ARATH1.048e-2935.10Probable disease resistance protein At5g63020 OS=A... [more]
DRL16_ARATH2.335e-2934.45Probable disease resistance protein At1g61190 OS=A... [more]
DRL28_ARATH5.201e-2937.00Probable disease resistance protein At4g27220 OS=A... [more]
DRL23_ARATH8.872e-2935.44Putative disease resistance protein At4g10780 OS=A... [more]
DRL1_ARATH8.872e-2934.95Probable disease resistance protein At1g12280 OS=A... [more]
DRL20_ARATH1.159e-2834.95Probable disease resistance protein At1g63360 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_030G04_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_030_T3_G04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV887346 ID=CV887346; Name=CV887346; organism=Citrus sinensis; type=EST; length=605bp
CTTTCTAAAGAGGAGGCATTTAATTTGTTCATAGACGGAGTTGGTAGTAG
CATTTTGCAAGTTCCAACTTTGAATAAAGAAATCATAAACGAAGTTGTTG
AGGAATGTGGTTGTTTACCGCTGGCAATTGTAACTGTAGCTGCTTCCATG
AGCGGCGAAGAAGAAATTTATGAATGGCAAAATGCGCTCAATGAATTGCG
TGGACGGCTGAGAAGTTTGAATGACGTAGATACTAAAGTGTTTGGGCGAT
TAGAATTCAGTTACCATCGCTTGAAAGATGAAAAGCTCCAACAGTGCTTC
TTGTATTGTGCATTGTATCCTGAAGACTTTGCCATTCCAAAGGATGAGCT
GATAGATCATTGGATTGCAGAAGGGTTTATCGAAGAAGTGAAGGATGTCC
AAGCAAAATATGATAGAGGGCATACTATATTGAACAGGCTTGTAAATTGC
TGCTTATTGGAAAGCGTCGAAGATGGAGGTTGTGTGAAGATGCATGATCT
TATAAGAGACATGGCGTTACGCATTACAAGCAAGAGTCCTTTATTCATGG
TGAAAGTTGGCCTACGTTTGCAAGAATTTCCCAGTGAACAAGAATGGAAA
GCGAA
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