CV887333
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV887333 vs. ExPASy Swiss-Prot
Match: FBK23_ARATH (F-box/kelch-repeat protein At1g57790 OS=Arabidopsis thaliana GN=At1g57790 PE=2 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 2.551e-39 Identity = 79/164 (48.17%), Postives = 114/164 (69.51%), Query Frame = -3 Query: 308 NKLVFCNGIFYCLSLTGWLGVFDPVKRDWGVLVVPPPKCPENFFAKNWWKGKFMVEHKGDILVIYTCCSENPIIFKLDQSKMAWEEMKTLDGLTLFASFLSSQSRADL-PGIMRNSVYFSKVRFFGKRCISYSLNDSRYYPRKQCYDWGEQDPFENIWIEPPED 796 N +VF NG+FYCL+ + VFDP R W VL VPPP+CP++ K+W +GKFMV +KGDILVI T +++P++FKLD ++ WEE TL LT+F S S +SR + G++RNSVYF ++ + K+ + YS ++ RY+ R+ DWG+Q +NIWIEPP++ Sbjct: 187 NNVVFSNGVFYCLNQRNHVAVFDPSLRTWNVLDVPPPRCPDD---KSWNEGKFMVGYKGDILVIRTYENKDPLVFKLDLTRGIWEEKDTLGSLTIFVSRKSCESRTYVKDGMLRNSVYFPELCYNEKQSVVYSFDEGRYHLREHDLDWGKQLSSDNIWIEPPKN 347
BLAST of CV887333 vs. ExPASy Swiss-Prot
Match: FB204_ARATH (F-box protein At3g56470 OS=Arabidopsis thaliana GN=At3g56470 PE=2 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 2.393e-29 Identity = 73/174 (41.95%), Postives = 100/174 (57.47%), Query Frame = -3 Query: 314 NRLPFVSSIWNKLVFCNGIFYCLSLTGWLGVFDPVKRDWGVLVVPPPKCPENFFAKNWWKGKFMVEHKGDILVIYTCCSENPIIFKLDQSKMAWEEMKTLDGLTLFASFLSSQSRAD---LPGIMRNSVYFSKVRFFGKRCISYSLNDSRYYPRKQCYDWGEQDPFENIWIEPP 826 NRL + + ++VF NG+FYCL+ TG L +FDP W VL PPK P + G FM EH+G+I +IY NP + KLD + W E KTL GLT++AS LSS+SRA+ GI N + S F + CI Y +++ + C+ W +Q+P+ENIWI PP Sbjct: 193 NRLQRNFNTFEQIVFSNGVFYCLTNTGCLALFDPSLNYWNVLPGRPPKRPGS-------NGCFMTEHQGEIFLIYMYRHMNPTVLKLDLTSFEWAERKTLGGLTIYASALSSESRAEQQKQSGIW-NCLCLSVFHGFKRTCIYYKVDEE----SEVCFKWKKQNPYENIWIMPP 354
BLAST of CV887333 vs. ExPASy Swiss-Prot
Match: FB217_ARATH (F-box protein At4g00893 OS=Arabidopsis thaliana GN=At4g00893 PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 4.513e-28 Identity = 64/168 (38.10%), Postives = 102/168 (60.71%), Query Frame = -3 Query: 305 NKLVFCNGIFYCLSLTGWLGVFDPVKRDWGVLVVPPPKCPENFFAKNWWKGK--FMVEHKGDILVIYTCCSENPIIFKLDQSKMAWEEMK--TLDGLTLFASFLSSQSRADLPGIMRNSVYFSKVRFFGKRCISYSLNDSRYYPRKQCYDWGEQDPFENIWIEPPEDI 796 + LV+ FYC + G L F+P R+W + +CP + W GK F+VE KG++ V++TC +E P+++KL M W+E+ TLDG+T F SF +S+ R +LP MRN+VYFS+ + K C+S+S ++SRY K+ W E P +++WI+ P+++ Sbjct: 219 SNLVYRRDRFYCFNAEGTLYSFEPSYREWSYICADKLRCPYVHENQYMWCGKAVFLVEKKGELFVMFTCSNEKPMVYKL--FSMKWKELSRTTLDGMTFFVSFYNSELRNNLPW-MRNNVYFSRFGYNRKHCVSFSFDESRYNTPKEWEQWVELCPPQSLWIDTPKNV 383
BLAST of CV887333 vs. ExPASy Swiss-Prot
Match: FBK62_ARATH (F-box/kelch-repeat protein At3g18720 OS=Arabidopsis thaliana GN=At3g18720 PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 8.531e-19 Identity = 64/167 (38.32%), Postives = 88/167 (52.69%), Query Frame = -3 Query: 308 NKLVFCNGIFYCLSLTGWLGVFDPVKRDWGVLVVPPPKCPENFFAKNWW--KGKFMVEHKGDILVIYTCCSENP--IIFKLDQSKMAWEEMKTLDGLTLFASFLSSQSRADLPGIMRNSVYFSKVRFFGKRCISYSLNDSRYYPRKQCYDWGEQDPFENIWIEPPED 796 N+ +F NG+FYCLS +G L VFDP + W VL V P + F + + FM EH+GDI V+ T N + FKL+ WEEMK +GLT+F+S +S +RA LP RN +Y S + F K S + + YY YD + W++PP D Sbjct: 231 NRCIFSNGMFYCLSTSGRLSVFDPSRETWNVLPVKPCRA----FRRKIMLVRQVFMTEHEGDIFVVTTRRVNNRKLLAFKLNLQGNVWEEMKVPNGLTVFSSDATSLTRAGLPEEERNILYSSDIDDFVK-----SSHPTFYY-----YDC-------SAWLQPPHD 376
BLAST of CV887333 vs. ExPASy Swiss-Prot
Match: FB49_ARATH (F-box protein At1g49360 OS=Arabidopsis thaliana GN=At1g49360 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 9.761e-15 Identity = 59/184 (32.07%), Postives = 90/184 (48.91%), Query Frame = -3 Query: 296 LVFCNGIFYCLSLTGWLGVFDPVKRDWGVLVVPP-PKCPENFFAKNWWKGKFMVEHKGDILVIYTCCSENPIIFKLDQSKMAWEEMKTLDGLTLFASFLSSQSRADLPGIMRNSVYFSKVRFFGKR------CISYSLNDSRY--YPRKQCYD----------WGEQDPFENIWIEPPEDISAF 790 +++ +G+FY S T LGVFDP R W VL V P P P + ++M E++G I ++ S P++++L++ + WE+ +TLDG ++F S S L G M N +YF RF +R C + +Y Y R C D WG++ +WIEPP IS + Sbjct: 294 ILYSDGLFYTASETA-LGVFDPTARTWNVLPVQPIPMAPRSI--------RWMTEYEGHIFLV-DASSLEPMVYRLNRLESVWEKKETLDGSSIFLSDGSCVMTYGLTGSMSNILYFWS-RFINERRSTKSPCPFSRNHPYKYSLYSRSSCEDPEGYYFEYLTWGQK---VGVWIEPPHSISIY 463 The following BLAST results are available for this feature:
BLAST of CV887333 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CV887333 ID=CV887333; Name=CV887333; organism=Citrus sinensis; type=EST; length=828bpback to top |