CV887322

Overview
NameCV887322
Unique NameCV887322
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length720
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV887322 vs. ExPASy Swiss-Prot
Match: CAH2_FLALI (Carbonic anhydrase 2 (Fragment) OS=Flaveria linearis PE=2 SV=1)

HSP 1 Score: 302.368 bits (773), Expect = 1.618e-81
Identity = 144/178 (80.90%), Postives = 159/178 (89.33%), Query Frame = -2
Query:  186 GQSPKFLVFACSDSRVCPSHILNFQPGEAFMVRNIANMVPPYDQKKYSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDNGTTASDFIEEWVKICSSAKSKVKKECNDLSFEEQCKNCEKEAVNVSLGNLLTYPFVRESVVKNTLALKGAHYDFVNGKFELWDLDFNILPSV 719
            GQSPKFLVFACSDSRVCPSHIL+FQPGEAF+VRNIANMVPPYD  K+SGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPD+GT ASDFIE+WVK+   AKSKVK  CN+L F + C  CEKEAVNVSLGNLLTYPFVR+++V   L+LKGAHYDFVNG F+LW+LDF I PS+
Sbjct:   11 GQSPKFLVFACSDSRVCPSHILDFQPGEAFVVRNIANMVPPYDTIKHSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDDGTPASDFIEQWVKLGLPAKSKVKANCNNLEFADLCTKCEKEAVNVSLGNLLTYPFVRDALVNKKLSLKGAHYDFVNGAFDLWNLDFGISPSL 188          
BLAST of CV887322 vs. ExPASy Swiss-Prot
Match: CAHC_SPIOL (Carbonic anhydrase, chloroplastic OS=Spinacia oleracea PE=1 SV=2)

HSP 1 Score: 285.804 bits (730), Expect = 1.567e-76
Identity = 135/180 (75.00%), Postives = 154/180 (85.56%), Query Frame = -2
Query:  180 GQSPKFLVFACSDSRVCPSHILNFQPGEAFMVRNIANMVPPYDQKKYSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDNGTTASDFIEEWVKICSSAKSKVKKECNDLSFEEQCKNCEKEAVNVSLGNLLTYPFVRESVVKNTLALKGAHYDFVNGKFELWDLDFNILPSVSV 719
            GQ+PKF+VFACSDSRVCPSH+L+FQPGEAFMVRNIANMVP +D+ KY+G GAAIEYAVLHLKVENIVVIGHS CGGIKGLMS PD G T +DFIE+WVKIC  AK KV  E  + +F EQC +CEKEAVNVSLGNLLTYPFVR+ +VK TLAL+G +YDFVNG FELW L++ + PS SV
Sbjct:  140 GQAPKFMVFACSDSRVCPSHVLDFQPGEAFMVRNIANMVPVFDKDKYAGVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMSFPDAGPTTTDFIEDWVKICLPAKHKVLAEHGNATFAEQCTHCEKEAVNVSLGNLLTYPFVRDGLVKKTLALQGGYYDFVNGSFELWGLEYGLSPSQSV 319          
BLAST of CV887322 vs. ExPASy Swiss-Prot
Match: CAHC_TOBAC (Carbonic anhydrase, chloroplastic OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 284.648 bits (727), Expect = 3.492e-76
Identity = 137/180 (76.11%), Postives = 155/180 (86.11%), Query Frame = -2
Query:  180 GQSPKFLVFACSDSRVCPSHILNFQPGEAFMVRNIANMVPPYDQKKYSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDNGTTASDFIEEWVKICSSAKSKVKKECNDLSFEEQCKNCEKEAVNVSLGNLLTYPFVRESVVKNTLALKGAHYDFVNGKFELWDLDFNILPSVSV 719
            GQSPKF+VFACSDSRVCPSH+LNFQPGEAF+VRNIANMVP YD+ +YSG GAAIEYAVLHLKVENIVVIGHS CGGIKGLMS+P +G+ ++ FIE+WVKI   AK+KV+ E  D  F +QC  CEKEAVNVSLGNLLTYPFVRE +VK TLALKG HYDFVNG FELW L+F + PS+SV
Sbjct:  142 GQSPKFMVFACSDSRVCPSHVLNFQPGEAFVVRNIANMVPAYDKTRYSGVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMSLPADGSESTAFIEDWVKIGLPAKAKVQGEHVDKCFADQCTACEKEAVNVSLGNLLTYPFVREGLVKKTLALKGGHYDFVNGGFELWGLEFGLSPSLSV 321          
BLAST of CV887322 vs. ExPASy Swiss-Prot
Match: CAH2_ARATH (Carbonic anhydrase 2 OS=Arabidopsis thaliana GN=CA2 PE=1 SV=2)

HSP 1 Score: 282.337 bits (721), Expect = 1.733e-75
Identity = 133/180 (73.89%), Postives = 152/180 (84.44%), Query Frame = -2
Query:  180 GQSPKFLVFACSDSRVCPSHILNFQPGEAFMVRNIANMVPPYDQKKYSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDNGTTASDFIEEWVKICSSAKSKVKKECNDLSFEEQCKNCEKEAVNVSLGNLLTYPFVRESVVKNTLALKGAHYDFVNGKFELWDLDFNILPSVSV 719
            GQSPK++VFACSDSRVCPSH+L+F PG+AF+VRNIANMVPP+D+ KY+G GAAIEYAVLHLKVENIVVIGHS CGGIKGLMS P +G  ++DFIE+WVKIC  AKSKV  E    +FE+QC  CE+EAVNVSL NLLTYPFVRE VVK TLALKG +YDFVNG FELW+L F I P  S+
Sbjct:   80 GQSPKYMVFACSDSRVCPSHVLDFHPGDAFVVRNIANMVPPFDKVKYAGVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMSFPLDGNNSTDFIEDWVKICLPAKSKVLAESESSAFEDQCGRCEREAVNVSLANLLTYPFVREGVVKGTLALKGGYYDFVNGSFELWELQFGISPVHSI 259          
BLAST of CV887322 vs. ExPASy Swiss-Prot
Match: CAHC_ARATH (Carbonic anhydrase, chloroplastic OS=Arabidopsis thaliana GN=CA1 PE=1 SV=2)

HSP 1 Score: 280.026 bits (715), Expect = 8.600e-75
Identity = 132/180 (73.33%), Postives = 152/180 (84.44%), Query Frame = -2
Query:  180 GQSPKFLVFACSDSRVCPSHILNFQPGEAFMVRNIANMVPPYDQKKYSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDNGTTASDFIEEWVKICSSAKSKVKKECNDLSFEEQCKNCEKEAVNVSLGNLLTYPFVRESVVKNTLALKGAHYDFVNGKFELWDLDFNILPSVSV 719
            GQSPK++VFACSDSRVCPSH+L+FQPG+AF+VRNIANMVPP+D+ KY G GAAIEYAVLHLKVENIVVIGHS CGGIKGLMS P +G  ++DFIE+WVKIC  AKSKV  E  D +FE+QC  CE+EAVNVSL NLLTYPFVRE +VK TLALKG +YDFV G FELW L+F +  + SV
Sbjct:  157 GQSPKYMVFACSDSRVCPSHVLDFQPGDAFVVRNIANMVPPFDKVKYGGVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMSFPLDGNNSTDFIEDWVKICLPAKSKVISELGDSAFEDQCGRCEREAVNVSLANLLTYPFVREGLVKGTLALKGGYYDFVKGAFELWGLEFGLSETSSV 336          
BLAST of CV887322 vs. ExPASy Swiss-Prot
Match: CAH1_FLALI (Carbonic anhydrase 1 OS=Flaveria linearis PE=2 SV=1)

HSP 1 Score: 278.485 bits (711), Expect = 2.502e-74
Identity = 130/180 (72.22%), Postives = 149/180 (82.78%), Query Frame = -2
Query:  180 GQSPKFLVFACSDSRVCPSHILNFQPGEAFMVRNIANMVPPYDQKKYSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDNGTTASDFIEEWVKICSSAKSKVKKECNDLSFEEQCKNCEKEAVNVSLGNLLTYPFVRESVVKNTLALKGAHYDFVNGKFELWDLDFNILPSVSV 719
            GQSPKF+VFACSDSRVCPSH+L+FQPGEAF+VRN+ANMVPP+D+ KYSG GAA+EYAVLHLKV+ I VIGHS CGGIKGLM+ PD G  ++DFIE+WVK+C  AKSKV  E N    ++QC  CEKEAVNVSLGNLLTYPFVR+ +  NTLALKG HYDFVNG FELW LDF +    SV
Sbjct:  151 GQSPKFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANMVPPFDKTKYSGVGAAVEYAVLHLKVQEIFVIGHSRCGGIKGLMTFPDEGPHSTDFIEDWVKVCLPAKSKVVAEHNGTHLDDQCVQCEKEAVNVSLGNLLTYPFVRDGLRNNTLALKGGHYDFVNGTFELWALDFGLSSPTSV 330          
BLAST of CV887322 vs. ExPASy Swiss-Prot
Match: CAHX_FLAPR (Carbonic anhydrase OS=Flaveria pringlei PE=2 SV=1)

HSP 1 Score: 277.33 bits (708), Expect = 5.575e-74
Identity = 130/180 (72.22%), Postives = 149/180 (82.78%), Query Frame = -2
Query:  180 GQSPKFLVFACSDSRVCPSHILNFQPGEAFMVRNIANMVPPYDQKKYSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDNGTTASDFIEEWVKICSSAKSKVKKECNDLSFEEQCKNCEKEAVNVSLGNLLTYPFVRESVVKNTLALKGAHYDFVNGKFELWDLDFNILPSVSV 719
            GQSPKF+VFACSDSRVCPSH+L+FQPGEAF+VRN+ANMVPP+D+ KYSG GAA+EYAVLHLKV+ I VIGHS CGGIKGLM+ PD G  ++DFIE+WVK+C  AKSKV  E N    ++QC  CEKEAVNVSLGNLLTYPFVR+ +  NTLALKG HYDFVNG FELW LDF +    SV
Sbjct:  150 GQSPKFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANMVPPFDKTKYSGVGAAVEYAVLHLKVQEIFVIGHSRCGGIKGLMTFPDEGPHSTDFIEDWVKVCLPAKSKVVAEHNGTHLDDQCVLCEKEAVNVSLGNLLTYPFVRDGLRNNTLALKGGHYDFVNGTFELWALDFGLSSPTSV 329          
BLAST of CV887322 vs. ExPASy Swiss-Prot
Match: CAHX_FLABR (Carbonic anhydrase OS=Flaveria brownii PE=2 SV=1)

HSP 1 Score: 277.33 bits (708), Expect = 5.575e-74
Identity = 130/180 (72.22%), Postives = 149/180 (82.78%), Query Frame = -2
Query:  180 GQSPKFLVFACSDSRVCPSHILNFQPGEAFMVRNIANMVPPYDQKKYSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDNGTTASDFIEEWVKICSSAKSKVKKECNDLSFEEQCKNCEKEAVNVSLGNLLTYPFVRESVVKNTLALKGAHYDFVNGKFELWDLDFNILPSVSV 719
            GQSPKF+VFACSDSRVCPSH+L+FQPGEAF+VRN+ANMVPP+D+ KYSG GAA+EYAVLHLKV+ I VIGHS CGGIKGLM+ PD G  ++DFIE+WVK+C  AKSKV  E N    ++QC  CEKEAVNVSLGNLLTYPFVR+ +  NTLALKG HYDFVNG FELW LDF +    SV
Sbjct:  151 GQSPKFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANMVPPFDKTKYSGVGAAVEYAVLHLKVQEIFVIGHSRCGGIKGLMTFPDEGPHSTDFIEDWVKVCLPAKSKVVAEHNGTHLDDQCVLCEKEAVNVSLGNLLTYPFVRDGLRNNTLALKGGHYDFVNGTFELWALDFGLSSPTSV 330          
BLAST of CV887322 vs. ExPASy Swiss-Prot
Match: CAHX_FLABI (Carbonic anhydrase OS=Flaveria bidentis PE=2 SV=2)

HSP 1 Score: 275.018 bits (702), Expect = 2.767e-73
Identity = 129/180 (71.67%), Postives = 148/180 (82.22%), Query Frame = -2
Query:  180 GQSPKFLVFACSDSRVCPSHILNFQPGEAFMVRNIANMVPPYDQKKYSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDNGTTASDFIEEWVKICSSAKSKVKKECNDLSFEEQCKNCEKEAVNVSLGNLLTYPFVRESVVKNTLALKGAHYDFVNGKFELWDLDFNILPSVSV 719
            GQSPKF+VFACSDSRVCPSH+L+FQPGEAF+VRN+ANMVPP+D+ KYSG GAA+EYAVLHLKV+ I VIGHS CGGIKGLM+ PD G  ++DFIE+WVK+C  AKSKV  E N    ++QC  CEKEAVNVSLGNLLTYPFVR+ +   TLALKG HYDFVNG FELW LDF +    SV
Sbjct:  151 GQSPKFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANMVPPFDKTKYSGVGAAVEYAVLHLKVQEIFVIGHSRCGGIKGLMTFPDEGPHSTDFIEDWVKVCLPAKSKVVAEHNGTHLDDQCVLCEKEAVNVSLGNLLTYPFVRDGLRNKTLALKGGHYDFVNGTFELWALDFGLSSPTSV 330          
BLAST of CV887322 vs. ExPASy Swiss-Prot
Match: CAHC_PEA (Carbonic anhydrase, chloroplastic OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 274.248 bits (700), Expect = 4.719e-73
Identity = 130/180 (72.22%), Postives = 149/180 (82.78%), Query Frame = -2
Query:  180 GQSPKFLVFACSDSRVCPSHILNFQPGEAFMVRNIANMVPPYDQKKYSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDNGTTASDFIEEWVKICSSAKSKVKKECNDLSFEEQCKNCEKEAVNVSLGNLLTYPFVRESVVKNTLALKGAHYDFVNGKFELWDLDFNILPSVSV 719
            GQSP F+VFACSDSRVCPSH+L+FQPGEAF+VRN+AN+VPPYDQ KY+G GAAIEYAVLHLKV NIVVIGHS CGGIKGL+S P +GT ++DFIEEWVKI   AK+KVK +  D  F E C +CEKEAVN SLGNLLTYPFVRE +V  TLALKG +YDFV G FELW L+F +  + SV
Sbjct:  149 GQSPPFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANLVPPYDQAKYAGTGAAIEYAVLHLKVSNIVVIGHSACGGIKGLLSFPFDGTYSTDFIEEWVKIGLPAKAKVKAQHGDAPFAELCTHCEKEAVNASLGNLLTYPFVREGLVNKTLALKGGYYDFVKGSFELWGLEFGLSSTFSV 328          
The following BLAST results are available for this feature:
BLAST of CV887322 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
CAH2_FLALI1.618e-8180.90Carbonic anhydrase 2 (Fragment) OS=Flaveria linear... [more]
CAHC_SPIOL1.567e-7675.00Carbonic anhydrase, chloroplastic OS=Spinacia oler... [more]
CAHC_TOBAC3.492e-7676.11Carbonic anhydrase, chloroplastic OS=Nicotiana tab... [more]
CAH2_ARATH1.733e-7573.89Carbonic anhydrase 2 OS=Arabidopsis thaliana GN=CA... [more]
CAHC_ARATH8.600e-7573.33Carbonic anhydrase, chloroplastic OS=Arabidopsis t... [more]
CAH1_FLALI2.502e-7472.22Carbonic anhydrase 1 OS=Flaveria linearis PE=2 SV=... [more]
CAHX_FLAPR5.575e-7472.22Carbonic anhydrase OS=Flaveria pringlei PE=2 SV=1[more]
CAHX_FLABR5.575e-7472.22Carbonic anhydrase OS=Flaveria brownii PE=2 SV=1[more]
CAHX_FLABI2.767e-7371.67Carbonic anhydrase OS=Flaveria bidentis PE=2 SV=2[more]
CAHC_PEA4.719e-7372.22Carbonic anhydrase, chloroplastic OS=Pisum sativum... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_030F02_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_030_T7_F02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV887322 ID=CV887322; Name=CV887322; organism=Citrus sinensis; type=EST; length=720bp
ATTTCATTACAACTGGAATAAAGGAAAACACGGTACAATATTTGAGCCAA
ATACAAGAAGCTAAAATGCTTATTTGTTTCTTGAGGACATGTACAAGTAC
AAACGCACAATACAATATGAGCTTTAATGTGAAATATCATCGAAGCTAGG
GCAACCGGGTATTATGCATCAGGAGCTCAGACAGATACAGAAGGTAAAAT
GTTGAAGTCAAGATCCCAAAGCTCAAATTTTCCATTGACGAAATCATAAT
GTGCTCCCTTCAGCGCCAGGGTGTTCTTCACCACGCTCTCTCTCACAAAT
GGGTATGTCAATAGGTTTCCAAGGGACACATTCACAGCCTCCTTTTCACA
GTTCTTGCATTGCTCCTCAAAACTCAAATCATTGCATTCTTTTTTCACCT
TGGACTTGGCAGATGAACAGATTTTGACCCACTCTTCTATGAAATCACTC
GCAGTGGTCCCATTATCAGGGATAGACATGAGCCCCTTTATACCACCACA
GCAACTGTGTCCAATGACTACAATATTCTCCACCTTCAGATGTAGCACCG
CATATTCAATGGCTGCACCTGCTCCAGAGTATTTTTTCTGGTCATATGGA
GGGACCATATTGGCAATGTTTCGAACCATAAACGCCTCTCCTGGTTGAAA
ATTGAGGATATGGGATGGACATACTCGAGAGTCTGAGCATGCAAATACCA
GAAACTTGGGGCTTTGGCCT
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