CV887320

Overview
NameCV887320
Unique NameCV887320
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length899
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV887320 vs. ExPASy Swiss-Prot
Match: COMT1_CAPCH (Caffeic acid 3-O-methyltransferase OS=Capsicum chinense GN=COMT PE=2 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.540e-40
Identity = 83/186 (44.62%), Postives = 117/186 (62.90%), Query Frame = -3
Query:  322 MSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCXRMILQKHPFICEGVNFDLPEVVAEAPSIPGVTHFGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGKHRTEQEFKQLGLSAGFPHLRALYVDYFHTLLEFQK 879
            MS  +   M  +L+ Y GF+G+  +VDVGG  G    MI+ K+P I +G+NFDLP V+ +APS PGV   GGDMF S+P ADAIFMKW+   W+DD C  +++NCY+ALPA GK+I  E +LP+  + S  T++ + GDI +M  +   GK RTE++F+ L     F   R +   Y   ++EF K
Sbjct:  176 MSDHTTLSMKKILEDYTGFEGLNSIVDVGGGTGATVNMIVSKYPSI-KGINFDLPHVIRDAPSYPGVEQVGGDMFVSVPKADAIFMKWICHDWSDDHCIKLLKNCYEALPANGKVIIVECILPEAPDTSAATKSKVHGDI-IMLAHNPGGKERTEKDFEALANWGWFSRFRKVCCAYHTWVMEFNK 359          
BLAST of CV887320 vs. ExPASy Swiss-Prot
Match: COMT1_MEDSA (Caffeic acid 3-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 3.432e-40
Identity = 85/192 (44.27%), Postives = 122/192 (63.54%), Query Frame = -3
Query:  322 LMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCXRMILQKHPFICEGVNFDLPEVVAEAPSIPGVTHFGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGKHRTEQEFKQLGLSAGFPHLRALYVDYFHT-LLEFQK 894
            +  K MS  S   M  +L+ Y GF+G+K LVDVGG  G     I+ K+P I +G+NFDLP V+ +APS PGV H GGDMF SIP ADA+FMKW+   W+D+ C   ++NCY+ALP  GK+I  E +LP   + S  T+ ++  D+ +M  +   GK RT++EF+ L   AGF   + ++ + F+T ++EF K
Sbjct:  175 VFNKGMSDHSTITMKKILETYTGFEGLKSLVDVGGGTGAVINTIVSKYPTI-KGINFDLPHVIEDAPSYPGVEHVGGDMFVSIPKADAVFMKWICHDWSDEHCLKFLKNCYEALPDNGKVIVAECILPVAPDSSLATKGVVHIDV-IMLAHNPGGKERTQKEFEDLAKGAGFQGFK-VHCNAFNTYIMEFLK 363          
BLAST of CV887320 vs. ExPASy Swiss-Prot
Match: COMT1_MAIZE (Caffeic acid 3-O-methyltransferase OS=Zea mays PE=3 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 5.854e-40
Identity = 84/191 (43.98%), Postives = 113/191 (59.16%), Query Frame = -3
Query:  322 LMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCXRMILQKHPFICEGVNFDLPEVVAEAPSIPGVTHFGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGKHRTEQEFKQLGLSAGFPHLRALYVDYFHTLLEFQK 894
            +  + M   SV     +LD Y GF+GV  LVDVGG  G     I  +HP I  GVNFDLP V++EAP  PGV H GGDMF S+PA DAI MKW+L  W+D  C  +++NCY ALP  GK+I  E VLP ++  + + + +   D+ +M  +   GK R E+EF++L   AGF   +A Y+      +EF K
Sbjct:  176 VFNEGMKNHSVIITKKLLDFYTGFEGVSTLVDVGGGVGATLHAITSRHPHI-SGVNFDLPHVISEAPPFPGVRHVGGDMFASVPAGDAILMKWILHDWSDAHCATLLKNCYDALPENGKVIVVECVLPVNTEATPKAQGVFHVDM-IMLAHNPGGKERYEREFRELAKGAGFSGFKATYIYANAWAIEFIK 364          
BLAST of CV887320 vs. ExPASy Swiss-Prot
Match: COMT1_CAPAN (Caffeic acid 3-O-methyltransferase OS=Capsicum annuum GN=COMT PE=2 SV=2)

HSP 1 Score: 164.851 bits (416), Expect = 5.854e-40
Identity = 83/191 (43.46%), Postives = 116/191 (60.73%), Query Frame = -3
Query:  322 LMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCXRMILQKHPFICEGVNFDLPEVVAEAPSIPGVTHFGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGKHRTEQEFKQLGLSAGFPHLRALYVDYFHTLLEFQK 894
            +  + MS  S   M  +L+ Y GF+G+  +VDVGG  G    MI+ K+P I +G+NFDL  V+ +AP+ PGV H G DMF S+P ADAIFMKW+   W+D+ C   ++NCY+ALPA GK++  E +LP+  + S  T+  +  DI VM  +   GK RTE+EF+ L   AGF   R     Y   ++EF K
Sbjct:  171 VFNRGMSDHSTMTMKKILEDYKGFEGLNSIVDVGGGTGATVNMIVSKYPSI-KGINFDLSHVIEDAPAYPGVEHVGRDMFVSVPKADAIFMKWICHDWSDEHCLKFLKNCYEALPANGKVLVAECILPETPDTSAATKNAVHVDI-VMLAHNPGGKERTEKEFEALAKGAGFTGFRRACCAYQTWVMEFHK 359          
BLAST of CV887320 vs. ExPASy Swiss-Prot
Match: COMT1_COFCA (Caffeic acid 3-O-methyltransferase OS=Coffea canephora PE=2 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 1.304e-39
Identity = 82/176 (46.59%), Postives = 113/176 (64.20%), Query Frame = -3
Query:  367 LMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCXRMILQKHPFICEGVNFDLPEVVAEAPSIPGVTHFGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGKHRTEQEFKQLGLSAGFPHLR 894
            +  + MS  S   M  +L+ Y GF+G+K +VDVGG  G    MI+ K+P I +G+NF+LP VV +APS  GV H GGDMF S+P  DAIFMKW+   W+DD C+ +++NCY+ALP  GK+I  E VLP+  + S  T+ ++  D+ VM  +   GK RTE+EF+ L   AGF   R
Sbjct:  162 VFNQGMSNHSTITMKKILEVYRGFEGLKTVVDVGGGTGATLNMIISKYPTI-KGINFELPHVVEDAPSHSGVEHVGGDMFVSVPKGDAIFMKWICHDWSDDHCRKLLKNCYQALPDNGKVILAECVLPEAPDTSLATQNVVHVDV-VMLAHNPGGKERTEKEFEALAKGAGFKEFR 335          
BLAST of CV887320 vs. ExPASy Swiss-Prot
Match: COMT1_POPTM (Caffeic acid 3-O-methyltransferase 1 OS=Populus tremuloides GN=OMT1 PE=1 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 3.794e-39
Identity = 82/191 (42.93%), Postives = 115/191 (60.21%), Query Frame = -3
Query:  322 LMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCXRMILQKHPFICEGVNFDLPEVVAEAPSIPGVTHFGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGKHRTEQEFKQLGLSAGFPHLRALYVDYFHTLLEFQK 894
            +  K MS  S   M  +L+ Y GF+G+  LVDVGG  G     I+ K+P I +G+NFDLP V+ +APS PGV H GGDMF S+P ADA+FMKW+   W+D  C   ++NCY ALP  GK+I  E +LP   + S  T+ ++  D+ +M  +   GK RTE+EF+ L   AGF     +   +   ++EF+K
Sbjct:  175 VFNKGMSDHSTITMKKILETYKGFEGLTSLVDVGGGTGAVVNTIVSKYPSI-KGINFDLPHVIEDAPSYPGVEHVGGDMFVSVPKADAVFMKWICHDWSDAHCLKFLKNCYDALPENGKVILVECILPVAPDTSLATKGVVHVDV-IMLAHNPGGKERTEKEFEGLAKGAGFQGFEVMCCAFNTHVIEFRK 363          
BLAST of CV887320 vs. ExPASy Swiss-Prot
Match: COMT1_OCIBA (Caffeic acid 3-O-methyltransferase 1 OS=Ocimum basilicum GN=COMT1 PE=2 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 3.794e-39
Identity = 82/191 (42.93%), Postives = 114/191 (59.69%), Query Frame = -3
Query:  322 LMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCXRMILQKHPFICEGVNFDLPEVVAEAPSIPGVTHFGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGKHRTEQEFKQLGLSAGFPHLRALYVDYFHTLLEFQK 894
            +  + MS  S   M  +L+ Y GF G+K +VDVGG  G    MI+ K+P I +G+NFDLP V+ +APS PGV H GGDMF S+P  DAIFMKW+   W+D+ C   ++NCY ALP  GK+I  E VLP+  +    T+ ++  D+ +M  +   GK RTE+EF+ L  +AGF         Y   ++E  K
Sbjct:  173 VFNQGMSNHSTITMKKILETYTGFDGLKTVVDVGGGTGATLNMIVSKYPSI-KGINFDLPHVIEDAPSYPGVEHVGGDMFVSVPKGDAIFMKWICHDWSDEHCVKFLKNCYDALPQNGKVILAECVLPEAPDTGLATKNVVHIDV-IMLAHNPGGKERTEKEFQGLAKAAGFKQFNKACCAYNTWIMELLK 361          
BLAST of CV887320 vs. ExPASy Swiss-Prot
Match: COMT1_POPKI (Caffeic acid 3-O-methyltransferase 1 OS=Populus kitakamiensis GN=HOMT1 PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 6.472e-39
Identity = 82/191 (42.93%), Postives = 115/191 (60.21%), Query Frame = -3
Query:  322 LMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCXRMILQKHPFICEGVNFDLPEVVAEAPSIPGVTHFGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGKHRTEQEFKQLGLSAGFPHLRALYVDYFHTLLEFQK 894
            +  K MS  S   M  +L+ Y GF+G+  LVDVGG  G     I+ K+P I +G+NFDLP V+ +APS PGV H GGDMF S+P ADA+FMKW+   W+D  C   ++NCY ALP  GK+I  E +LP   + S  T+ ++  D+ +M  +   GK RTE+EF+ L   AGF     +   +   ++EF+K
Sbjct:  175 VFNKGMSDHSTITMKKILETYKGFEGLTSLVDVGGGTGAVVNTIVSKYPSI-KGINFDLPHVIEDAPSYPGVEHVGGDMFVSVPNADAVFMKWICHDWSDAHCLKFLKNCYDALPENGKVILVECILPVAPDTSLATKGVVHVDV-IMLAHNPGGKERTEKEFEGLANGAGFQGFEVMCCAFNTHVIEFRK 363          
BLAST of CV887320 vs. ExPASy Swiss-Prot
Match: COMT2_POPTM (Caffeic acid 3-O-methyltransferase 2 OS=Populus tremuloides GN=OMT2 PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 8.453e-39
Identity = 80/191 (41.88%), Postives = 117/191 (61.26%), Query Frame = -3
Query:  322 LMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCXRMILQKHPFICEGVNFDLPEVVAEAPSIPGVTHFGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGKHRTEQEFKQLGLSAGFPHLRALYVDYFHTLLEFQK 894
            +  K MS  S   M  +L+ Y GF+G+  LVDVGG  G     I+ K+P I +G+NFDLP V+A+AP+ PGV + GGDMF S+P ADA+FMKW+   W+D+ C   ++NCY ALP  GK+I  E +LP   + S  T+ ++  D+ +M  +   GK RT++EF+ L   AGF     +   +   ++EF+K
Sbjct:  174 VFNKGMSVHSKMAMKKILETYKGFEGLASLVDVGGGTGAVVSTIVSKYPSI-KGINFDLPHVIADAPAFPGVENVGGDMFVSVPKADAVFMKWICHDWSDEHCLTFLKNCYDALPENGKVILVECILPVAPDTSLATKGVMHVDV-IMLAHNPGGKERTDREFESLARGAGFKGFEVMCCAFNTHVIEFRK 362          
BLAST of CV887320 vs. ExPASy Swiss-Prot
Match: COMT3_POPKI (Caffeic acid 3-O-methyltransferase 3 OS=Populus kitakamiensis GN=HOMT3 PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 1.104e-38
Identity = 80/191 (41.88%), Postives = 117/191 (61.26%), Query Frame = -3
Query:  322 LMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCXRMILQKHPFICEGVNFDLPEVVAEAPSIPGVTHFGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGKHRTEQEFKQLGLSAGFPHLRALYVDYFHTLLEFQK 894
            +  K MS  S   M  +L+ Y GF+G+  LVDVGG  G     I+ K+P I +G+NFDLP V+A+AP+ PGV + GGDMF S+P ADA+FMKW+   W+D+ C  +++NCY ALP  GK+I  E +LP   + S  T+ ++  D  +M  +   GK RT++EF+ L   AGF     +   +   ++EF+K
Sbjct:  174 VFNKGMSDHSKMAMKKILESYKGFEGLASLVDVGGGTGAVVSTIVSKYPSI-KGINFDLPHVIADAPAFPGVENVGGDMFVSVPKADAVFMKWICHDWSDEHCLRLLKNCYDALPENGKVILVECILPVAPDTSLATKGVMHVDA-IMLAHNPGGKERTDKEFEGLARGAGFKGFEVMCCAFNTHVIEFRK 362          
The following BLAST results are available for this feature:
BLAST of CV887320 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 39
Match NameE-valueIdentityDescription
COMT1_CAPCH1.540e-4044.62Caffeic acid 3-O-methyltransferase OS=Capsicum chi... [more]
COMT1_MEDSA3.432e-4044.27Caffeic acid 3-O-methyltransferase OS=Medicago sat... [more]
COMT1_MAIZE5.854e-4043.98Caffeic acid 3-O-methyltransferase OS=Zea mays PE=... [more]
COMT1_CAPAN5.854e-4043.46Caffeic acid 3-O-methyltransferase OS=Capsicum ann... [more]
COMT1_COFCA1.304e-3946.59Caffeic acid 3-O-methyltransferase OS=Coffea canep... [more]
COMT1_POPTM3.794e-3942.93Caffeic acid 3-O-methyltransferase 1 OS=Populus tr... [more]
COMT1_OCIBA3.794e-3942.93Caffeic acid 3-O-methyltransferase 1 OS=Ocimum bas... [more]
COMT1_POPKI6.472e-3942.93Caffeic acid 3-O-methyltransferase 1 OS=Populus ki... [more]
COMT2_POPTM8.453e-3941.88Caffeic acid 3-O-methyltransferase 2 OS=Populus tr... [more]
COMT3_POPKI1.104e-3841.88Caffeic acid 3-O-methyltransferase 3 OS=Populus ki... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_030F01_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_030_T3_F01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV887320 ID=CV887320; Name=CV887320; organism=Citrus sinensis; type=EST; length=899bp
TTTTTTTTTAGTAGGAAATTAAATTTATTAAAAAGAAAGAAAGCAAACGA
CAAAGGAAAAAAGAAATACATATCTATGAGATATGAGTTCAATGGTGTGA
GCTCAATATACAAAATACATGTCTATGAAATATGAGCTCAATAATTTATG
CTAATGATAAATTATTATTATTATTATTATTATTTTTATTTTGGTAGGCA
GCTAGTGCTAACCGCCTACTCAACATTTATAATTCATAGCAAGTTATTCC
ATCCTAGGCAACCACAGAAGCTCCATCACAAATATTCCCCACGTCTTTCA
AGGATCCAGAAACTAAAATTACTTTTGGAACTCAAGAAGAGTGTGAAAAT
AATCGACATAAAGAGCTCTCAAGTGTGGAAAACCAGCAGAGAGACCAAGT
TGCTTAAACTCTTGTTCAGTCCTGTGTTTACCTTTGGCCCTGTAAATGGT
CATAACAAAAATGTCCCCTTCTAAGAGAGCACGCGTCCTCTGACTTTCGT
TTGAATCATCGGGCAGCACGGGCTCACAAGCAATCAGTTTTCCTCCTGCC
GGAAGAGCCTTGTAACAGTTCTCCATTATCAGCTTGCATTCATCATCAGT
CCATGTAGTTAAAACCCACTTCATAAAGATAGCATCAGCGGCAGGAATGG
ACTTAAACATGTCCCCACCAAAATGGGTCACTCCAGGGATACTTGGAGCT
TCGGCAACAACCTCAGGCAAATCAAAATTGACCCCTTCACATATAAAAGG
ATGTTTCTGTAATATCATCCTCANGCAATCGCCTGCACTCCCACCCACAT
CAACCAATCGCTTCACACCTTTGAACCCATCGTAACCGTCCAAAACGGAC
GTCATGAACGGCACGGACACTCCCGACATGGCTTTTCGCATCAAGCCGT
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