CV887310

Overview
NameCV887310
Unique NameCV887310
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length338
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV887310 vs. ExPASy Swiss-Prot
Match: SUT12_ARATH (Sulfate transporter 1.2 OS=Arabidopsis thaliana GN=SULTR1;2 PE=1 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 6.459e-47
Identity = 93/112 (83.04%), Postives = 104/112 (92.86%), Query Frame = 1
Query:    1 AVSISFAKILLQVTRPRTAILGKVPRTTVYRNIQQYPEATKVPGVLIVRVDSAIYFSNSNYVKERILRWLEDEEEEVKAATYQPRIQFLIVEMSPVTDIDTSGIHALEGLHR 336
            AVSISFAKILLQVTRPRTA+LG +PRT+VYRNIQQYPEAT VPGVL +RVDSAIYFSNSNYV+ERI RWL +EEE+VKAA+  PRIQFLI+EMSPVTDIDTSGIHALE L++
Sbjct:  488 AVSISFAKILLQVTRPRTAVLGNIPRTSVYRNIQQYPEATMVPGVLTIRVDSAIYFSNSNYVRERIQRWLHEEEEKVKAASL-PRIQFLIIEMSPVTDIDTSGIHALEDLYK 598          
BLAST of CV887310 vs. ExPASy Swiss-Prot
Match: SUT13_ARATH (Sulfate transporter 1.3 OS=Arabidopsis thaliana GN=SULTR1;3 PE=2 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 2.714e-45
Identity = 91/112 (81.25%), Postives = 101/112 (90.18%), Query Frame = 1
Query:    1 AVSISFAKILLQVTRPRTAILGKVPRTTVYRNIQQYPEATKVPGVLIVRVDSAIYFSNSNYVKERILRWLEDEEEEVKAATYQPRIQFLIVEMSPVTDIDTSGIHALEGLHR 336
            AV ISFAKILLQVTRPRTAILGK+P T+VYRNI QYPEAT++PGVL +RVDSAIYFSNSNYV+ERI RWL DEEE V+AA   PRIQFLI+EMSPVTDIDTSGIHALE L++
Sbjct:  491 AVGISFAKILLQVTRPRTAILGKIPGTSVYRNINQYPEATRIPGVLTIRVDSAIYFSNSNYVRERIQRWLTDEEEMVEAARL-PRIQFLIIEMSPVTDIDTSGIHALEDLYK 601          
BLAST of CV887310 vs. ExPASy Swiss-Prot
Match: SUT2_STYHA (High affinity sulfate transporter 2 OS=Stylosanthes hamata GN=ST2 PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 6.917e-41
Identity = 83/112 (74.11%), Postives = 98/112 (87.50%), Query Frame = 1
Query:    1 AVSISFAKILLQVTRPRTAILGKVPRTTVYRNIQQYPEATKVPGVLIVRVDSAIYFSNSNYVKERILRWLEDEEEEVKAATYQPRIQFLIVEMSPVTDIDTSGIHALEGLHR 336
            AV+ISFAKILLQVTRPRTA+LGK+P T+VYRNIQQYP+A ++PG+LI+RVDSAIYFSNSNY+KERILRWL DE  + +  +  P IQ LIVEMSPVTDIDTSGIHA E L++
Sbjct:  498 AVAISFAKILLQVTRPRTAVLGKLPGTSVYRNIQQYPKAEQIPGMLIIRVDSAIYFSNSNYIKERILRWLIDEGAQ-RTESELPEIQHLIVEMSPVTDIDTSGIHAFEELYK 608          
BLAST of CV887310 vs. ExPASy Swiss-Prot
Match: SUT1_STYHA (High affinity sulfate transporter 1 OS=Stylosanthes hamata GN=ST1 PE=2 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 7.647e-40
Identity = 81/112 (72.32%), Postives = 96/112 (85.71%), Query Frame = 1
Query:    1 AVSISFAKILLQVTRPRTAILGKVPRTTVYRNIQQYPEATKVPGVLIVRVDSAIYFSNSNYVKERILRWLEDEEEEVKAATYQPRIQFLIVEMSPVTDIDTSGIHALEGLHR 336
            AV+ISFAKILLQVTRPRTA+LGK+P T+VYRNIQQYP+A ++PG+LI+RVDSAIYFSNSNY+KERILRWL DE  + +  +  P IQ LI EMSPV DIDTSGIHA E L++
Sbjct:  503 AVAISFAKILLQVTRPRTAVLGKLPGTSVYRNIQQYPKAAQIPGMLIIRVDSAIYFSNSNYIKERILRWLIDEGAQ-RTESELPEIQHLITEMSPVPDIDTSGIHAFEELYK 613          
BLAST of CV887310 vs. ExPASy Swiss-Prot
Match: SUT11_ARATH (Sulfate transporter 1.1 OS=Arabidopsis thaliana GN=SULTR1;1 PE=2 SV=2)

HSP 1 Score: 153.295 bits (386), Expect = 3.552e-37
Identity = 74/110 (67.27%), Postives = 91/110 (82.73%), Query Frame = 1
Query:    1 AVSISFAKILLQVTRPRTAILGKVPRTTVYRNIQQYPEATKVPGVLIVRVDSAIYFSNSNYVKERILRWLEDEEEEVKAATYQPRIQFLIVEMSPVTDIDTSGIHALEGL 330
            AV ISFAKILLQVTRPRT +LGK+P + VYRN  QYP+A ++PG+LI+RVDSAIYFSNSNYV+ER  RW+ +E+E  K     P I+F+I+EMSPVTDIDTSGIH++E L
Sbjct:  483 AVVISFAKILLQVTRPRTTVLGKLPNSNVYRNTLQYPDAAQIPGILIIRVDSAIYFSNSNYVRERASRWVREEQENAKEYG-MPAIRFVIIEMSPVTDIDTSGIHSIEEL 591          
BLAST of CV887310 vs. ExPASy Swiss-Prot
Match: SUT31_ARATH (Sulfate transporter 3.1 OS=Arabidopsis thaliana GN=SULTR3;1 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 9.696e-27
Identity = 52/104 (50.00%), Postives = 84/104 (80.77%), Query Frame = 1
Query:    1 AVSISFAKILLQVTRPRTAILGKVPRTTVYRNIQQYPEATKVPGVLIVRVDSAIYFSNSNYVKERILRWLEDEEEEVKAATYQPRIQFLIVEMSPVTDIDTSGI 312
            AV+IS A++LL V+RP+TA+ G +P + +YRN +QYP +  VPG+LI+ +D+ IYF+N++Y++ERI+RW+++EEE VK +  +  +Q++I++MS V +IDTSGI
Sbjct:  479 AVAISIARLLLFVSRPKTAVKGNIPNSMIYRNTEQYPSSRTVPGILILEIDAPIYFANASYLRERIIRWIDEEEERVKQSG-ESSLQYIILDMSAVGNIDTSGI 581          
BLAST of CV887310 vs. ExPASy Swiss-Prot
Match: SUT3_STYHA (Low affinity sulfate transporter 3 OS=Stylosanthes hamata GN=ST3 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 2.821e-26
Identity = 54/113 (47.79%), Postives = 84/113 (74.34%), Query Frame = 1
Query:    1 AVSISFAKILLQVTRPRTAILGKVPRTTVYRNIQQYPEATKVPGVLIVRVDS-AIYFSNSNYVKERILRWLEDEEEEVKAATYQPRIQFLIVEMSPVTDIDTSGIHALEGLHR 336
            A+SISFAKILLQ  RP   +LG++P T  Y ++ QYP A   PG+L++R+ S ++ F+N+ +V+ERIL+W+EDEE++      + R+Q +I++M+ +T++DTSGI ALE LH+
Sbjct:  476 ALSISFAKILLQAIRPGVEVLGRIPTTEAYCDVAQYPMAVTTPGILVIRISSGSLCFANAGFVRERILKWVEDEEQDNIEEAAKGRVQAIIIDMTDLTNVDTSGILALEELHK 588          
BLAST of CV887310 vs. ExPASy Swiss-Prot
Match: SUT33_ARATH (Probable sulfate transporter 3.3 OS=Arabidopsis thaliana GN=SULTR3;3 PE=2 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 2.235e-23
Identity = 50/112 (44.64%), Postives = 78/112 (69.64%), Query Frame = 1
Query:    1 AVSISFAKILLQVTRPRTAILGKVPRTTVYRNIQQYPEATKVPGVLIVRVDSAIYFSNSNYVKERILRWLEDEEEEVKAATYQPRIQFLIVEMSPVTDIDTSGIHALEGLHR 336
            AV +S  KIL+QVTRP+  I+G +P T +YR++  Y EA ++PG L++ ++S + F+NSNY+ ER  RW+E+ EEE +A      +QFLI+EMS V+ +DT+G+   + L +
Sbjct:  463 AVGLSLFKILMQVTRPKMVIMGNIPGTDIYRDLHHYKEAQRIPGFLVLSIESPVNFANSNYLTERTSRWIEECEEE-EAQEKHSSLQFLILEMSAVSGVDTNGVSFFKELKK 573          
BLAST of CV887310 vs. ExPASy Swiss-Prot
Match: SUT34_ARATH (Probable sulfate transporter 3.4 OS=Arabidopsis thaliana GN=SULTR3;4 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 4.216e-22
Identity = 49/112 (43.75%), Postives = 79/112 (70.54%), Query Frame = 1
Query:    1 AVSISFAKILLQVTRPRTAILGKVPRTTVYRNIQQYPEATKVPGVLIVRVDSAIYFSNSNYVKERILRWLEDEEEEVKAATYQPRIQFLIVEMSPVTDIDTSGIHALEGLHR 336
            AV++S  KILL VTRP T+  G +P T +Y+++ +Y EA+++PG LI+ ++S IYF+NS Y+++RILRW  +EE  +K       ++ +I++M+ V+ IDTSG+ A+  L R
Sbjct:  486 AVAVSVIKILLHVTRPNTSEFGNIPGTQIYQSLGRYREASRIPGFLILAIESPIYFANSTYLQDRILRWAREEENRIK-ENNGTTLKCIILDMTAVSAIDTSGLEAVFELRR 596          
BLAST of CV887310 vs. ExPASy Swiss-Prot
Match: SUT41_ARATH (Sulfate transporter 4.1, chloroplastic OS=Arabidopsis thaliana GN=SULTR4;1 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 2.092e-21
Identity = 49/111 (44.14%), Postives = 74/111 (66.67%), Query Frame = 1
Query:    4 VSISFAKILLQVTRPRTAILGKVPRTTVYRNIQQYPEATKVPGVLIVRVDSAIYFSNSNYVKERILRWLEDEEEEVKAATYQPRIQFLIVEMSPVTDIDTSGIHALEGLHR 336
            V  S A ++ +   P  A+LG++P TTVYRNI+QYPEA    G++IVR+DS IYF+N +Y+K+R+  +    ++         RI F+I+EMSPVT ID+S + AL+ L++
Sbjct:  485 VGFSLAFVIHESANPHIAVLGRLPGTTVYRNIKQYPEAYTYNGIVIVRIDSPIYFANISYIKDRLREYEVAVDKYTNRGLEVDRINFVILEMSPVTHIDSSAVEALKELYQ 595          
The following BLAST results are available for this feature:
BLAST of CV887310 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
SUT12_ARATH6.459e-4783.04Sulfate transporter 1.2 OS=Arabidopsis thaliana GN... [more]
SUT13_ARATH2.714e-4581.25Sulfate transporter 1.3 OS=Arabidopsis thaliana GN... [more]
SUT2_STYHA6.917e-4174.11High affinity sulfate transporter 2 OS=Stylosanthe... [more]
SUT1_STYHA7.647e-4072.32High affinity sulfate transporter 1 OS=Stylosanthe... [more]
SUT11_ARATH3.552e-3767.27Sulfate transporter 1.1 OS=Arabidopsis thaliana GN... [more]
SUT31_ARATH9.696e-2750.00Sulfate transporter 3.1 OS=Arabidopsis thaliana GN... [more]
SUT3_STYHA2.821e-2647.79Low affinity sulfate transporter 3 OS=Stylosanthes... [more]
SUT33_ARATH2.235e-2344.64Probable sulfate transporter 3.3 OS=Arabidopsis th... [more]
SUT34_ARATH4.216e-2243.75Probable sulfate transporter 3.4 OS=Arabidopsis th... [more]
SUT41_ARATH2.092e-2144.14Sulfate transporter 4.1, chloroplastic OS=Arabidop... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_030E08_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_030_T3_E08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV887310 ID=CV887310; Name=CV887310; organism=Citrus sinensis; type=EST; length=338bp
GCGGTCTCCATATCCTTTGCCAAGATTCTCTTACAAGTTACCAGACCTCG
GACAGCAATTCTGGGAAAGGTTCCCAGGACAACTGTGTACAGAAACATCC
AACAATATCCCGAAGCAACCAAGGTTCCAGGTGTTTTGATCGTGAGAGTT
GATTCAGCAATTTACTTTTCAAACTCTAATTACGTTAAGGAGAGGATATT
GAGATGGTTGGAAGATGAAGAAGAAGAAGTAAAAGCTGCTACCTATCAAC
CAAGAATACAGTTTTTAATTGTTGAGATGTCACCTGTTACCGATATCGAC
ACCAGTGGCATCCATGCCTTGGAAGGGTTACACAGGAG
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