CV887307

Overview
NameCV887307
Unique NameCV887307
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length887
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CV887307 vs. ExPASy Swiss-Prot
Match: ABIL2_ARATH (Protein ABIL2 OS=Arabidopsis thaliana GN=ABIL2 PE=1 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 4.526e-45
Identity = 107/217 (49.31%), Postives = 127/217 (58.53%), Query Frame = -2 
Query:  239 QEYIDHEGLSQQSLVINTPKYHKRYILPVGETMHGAIRTKSKYIGCSLDDEDDWHQFRNAVXXXXXXXXXXXXXXXXAXXXXXXXXXXXXXXXXXXSATFSFTSTMPKKDQDKRTVSPHRFPLLRSGSISNRPKIPNAGRPMTPNSSRPTTPNASDAKRRYPSEPRKSYSMRMPAERENCKDFE-QHPXXXXXXXXXXXXXXXXXKDDMLYTYLDEY 886
            QEY+DHEG SQQSLVI+TPK+HKRYILP GE M      K KY G SL+D DDW+QFRNAV                +                   ATFSFTST+PKK+QDKR+VSPHRFPLLRSGS++ R K  +  RP TP+ SR  TP       RYPSEPR+S S+R+  E++N K+ E Q P                 KDD LYT+LDEY
Sbjct:  110 QEYMDHEGRSQQSLVIDTPKFHKRYILPAGEIMTATNLEKLKYFGSSLEDADDWNQFRNAVRATIRETPPPPVRKSTSQSSSPRQPPQRS-------ATFSFTSTIPKKEQDKRSVSPHRFPLLRSGSVATR-KSASISRPTTPSKSRSITP------IRYPSEPRRSASVRVAFEKDNQKETEQQQPSKSKRLLKALLSRRKTKKDDTLYTFLDEY 312
[Close]
BLAST of CV887307 vs. ExPASy Swiss-Prot
Match: ABIL3_ARATH (Protein ABIL3 OS=Arabidopsis thaliana GN=ABIL3 PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 6.764e-41
Identity = 103/220 (46.82%), Postives = 121/220 (55.00%), Query Frame = -2 
Query:  239 QEYIDHEGLSQQSLVINTPKYHKRYILPVGETMHGAIRTKSKYIGCSLDDEDDWHQFRNAVXXXXXXXXXXXXXXXXAXXXXXXXXXXXXXXXXXXSATFSFTS--TMPKKDQDKRTVSPHRFPLLRSGSISNRPKIPNAGRPMTPNSSRPTTPNASDAKRRYPSEPRKSYSMRMPAERENCK--DFEQHPXXXXXXXXXXXXXXXXXKDDMLYTYLDEY 886
            QEY+DHEG SQQSLVI+TPK+HKRY LP GE   G    K K +  S D EDDW+QFRNAV                                    ATFSF+S  T PKK+QDKR VSPHRFPLLRSGS++ RP   +  RP TP+ SR  TP      +RYPSEPR+S S+R+  E+E  K  + +Q P                 KDD LYTYLDEY
Sbjct:  116 QEYMDHEGRSQQSLVIDTPKFHKRYFLPSGEIKRGGNLAKLKNVEGSFDGEDDWNQFRNAVRATIRETPPPPVRKPILQSPSQRKPQRS--------ATFSFSSIATAPKKEQDKRAVSPHRFPLLRSGSVAIRPS--SISRPTTPSKSRAVTP----TPKRYPSEPRRSASVRVAFEKEAQKEPEHQQQPSKSKRLLKALLSRRKTKKDDTLYTYLDEY 321
The following BLAST results are available for this feature:
BLAST of CV887307 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
ABIL2_ARATH4.526e-4549.31Protein ABIL2 OS=Arabidopsis thaliana GN=ABIL2 PE=... [more]
ABIL3_ARATH6.764e-4146.82Protein ABIL3 OS=Arabidopsis thaliana GN=ABIL3 PE=... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS04_2_030E05_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_030_T7_E05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV887307 ID=CV887307; Name=CV887307; organism=Citrus sinensis; type=EST; length=887bp
GATACATTGATAGGAAGCACAACATTTGCACACAATATTACAAGTAATTG
ATGACTGAAAAAGATAATAAAAGATGATGTCCGTCTACTTCTAGTAATAC
ATTAAAACTATATAAAGGGGGGAAAAAAATCATTCAAACAAAGGGCAAAC
AGAGTGCAATCTCACAGTCCTTTCCCGTACAGGATGTCTTTCCCTGGTTG
CTTGCCTTTTCTTTGCAAGCAGTATATGTATTTCATCAGTATTCATCCAG
ATAAGTATATAGCATGTCATCTTTCTTTGATTTGCGCCTACTAAGTAATG
CCTTAAGGAGCCGTTTACTTTTGCTGGGGTGTTGTTCAAAGTCTTTACAG
TTTTCCCTTTCAGCAGGCATACGCATGGAATATGATTTTCGAGGCTCCGA
AGGGTACCGTCGTTTTGCATCAGAAGCATTTGGAGTTGTTGGTCTACTTG
AATTTGGGGTCATTGGCCTTCCAGCATTTGGGATTTTCGGCCTATTTGAG
ATTGAACCAGAACGCAAAAGTGGAAACCGGTGTGGTGACACTGTACGCTT
ATCTTGATCTTTTTTGGGCATGGTTGATGTAAAGGAAAATGTGGCTGATC
GTTGTGGAGGTCTTGGTGAAGGTGAGGGAGAACGTCCTTTCCTAACTGAA
GATGCTGGGGTTTCCCTAGGTGTTTCTCTTGGGGTTTCAGTAATTGTAGC
TCGAACAGCATTCCTAAACTGATGCCAGTCATCTTCATCATCTAGGCTGC
ATCCAATGTACTTGGACTTGGTACGGATGGCACCATGCATGGTCTCCCCA
ACTGGCAGGATGTAGCGCTTATGATATTTTGGAGTATTTATCACCAGTGA
CTGTTGGGACAGGCCTTCATGATCAATATACTCTTGG
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