CV887304

Overview
NameCV887304
Unique NameCV887304
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length782
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV887304 vs. ExPASy Swiss-Prot
Match: PME61_ARATH (Probable pectinesterase/pectinesterase inhibitor 61 OS=Arabidopsis thaliana GN=PME61 PE=1 SV=1)

HSP 1 Score: 310.457 bits (794), Expect = 6.864e-84
Identity = 144/178 (80.90%), Postives = 155/178 (87.08%), Query Frame = -1
Query:  249 NRQFYRECDIYGTVDFIFGNAAVVLQKCAIYARKPMAMQKNTITAQNRKDPNQNTGISIHDCSLYAAPDFQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWLPSTGVAFLGGLS 782
            NRQF+REC+IYGTVDFIFGNAAV+LQ C IYARKPMA QK TITAQNRKDPNQNTGISIH C L A PD +ASKGS PTYLGRPWKLYSRVVYM++ MGDHI PRGWLEWNG FALD+LYYGEYMN G GS +G RV+WPGY VITS  EASKFTV+QFI GSSWLPSTGV+F  GLS
Sbjct:  409 NRQFFRECEIYGTVDFIFGNAAVILQSCNIYARKPMAQQKITITAQNRKDPNQNTGISIHACKLLATPDLEASKGSYPTYLGRPWKLYSRVVYMMSDMGDHIDPRGWLEWNGPFALDSLYYGEYMNKGLGSGIGQRVKWPGYHVITSTVEASKFTVAQFISGSSWLPSTGVSFFSGLS 586          
BLAST of CV887304 vs. ExPASy Swiss-Prot
Match: PME34_ARATH (Probable pectinesterase/pectinesterase inhibitor 34 OS=Arabidopsis thaliana GN=PME34 PE=2 SV=1)

HSP 1 Score: 299.286 bits (765), Expect = 1.582e-80
Identity = 137/179 (76.54%), Postives = 154/179 (86.03%), Query Frame = -1
Query:  246 NRQFYRECDIYGTVDFIFGNAAVVLQKCAIYARKPMAMQKNTITAQNRKDPNQNTGISIHDCSLYAAPDFQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWLPSTGVAFLGGLSV 782
            NRQF+RECDIYGTVDFIFGNAAVVLQ C+IYARKPM  QKNTITAQNRKDPNQNTGISIH   + AA D QA+ GS  TYLGRPWKL+SR VYM++Y+G H+  RGWLEWN  FALDTLYYGEY+NSGPGS +G RV WPGYRVI S  EA++FTV++FIYGSSWLPSTGV+FL GLS+
Sbjct:  420 NRQFFRECDIYGTVDFIFGNAAVVLQNCSIYARKPMDFQKNTITAQNRKDPNQNTGISIHASRVLAASDLQATNGSTQTYLGRPWKLFSRTVYMMSYIGGHVHTRGWLEWNTTFALDTLYYGEYLNSGPGSGLGQRVSWPGYRVINSTAEANRFTVAEFIYGSSWLPSTGVSFLAGLSI 598          
BLAST of CV887304 vs. ExPASy Swiss-Prot
Match: PME2_CITSI (Pectinesterase 2 OS=Citrus sinensis GN=PECS-2.1 PE=2 SV=1)

HSP 1 Score: 241.891 bits (616), Expect = 2.998e-63
Identity = 111/176 (63.07%), Postives = 137/176 (77.84%), Query Frame = -1
Query:  252 RQFYRECDIYGTVDFIFGNAAVVLQKCAIYARKPMAMQKNTITAQNRKDPNQNTGISIHDCSLYAAPDFQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWLPSTGVAFLGGL 779
            RQFYRECDIYGTVDFIFGNAAVVLQ C I+ARKP   + NT+TAQ R DPNQ+TGI IH+C + AA D +  + S+ T+LGRPWK YSR VY+ T++   I P GW+EW+GDFAL+TLYY EYMN+GPGS+  +RV+W GY V+TS ++ S+FTV  FI G+SWLP+T V F  GL
Sbjct:  336 RQFYRECDIYGTVDFIFGNAAVVLQNCNIFARKP-PNRTNTLTAQGRTDPNQSTGIIIHNCRVTAASDLKPVQSSVKTFLGRPWKQYSRTVYIKTFLDSLINPAGWMEWSGDFALNTLYYAEYMNTGPGSSTANRVKWRGYHVLTSPSQVSQFTVGNFIAGNSWLPATNVPFTSGL 510          
BLAST of CV887304 vs. ExPASy Swiss-Prot
Match: PME25_ARATH (Probable pectinesterase/pectinesterase inhibitor 25 OS=Arabidopsis thaliana GN=PME25 PE=2 SV=1)

HSP 1 Score: 236.498 bits (602), Expect = 1.260e-61
Identity = 111/176 (63.07%), Postives = 127/176 (72.16%), Query Frame = -1
Query:  252 RQFYRECDIYGTVDFIFGNAAVVLQKCAIYARKPMAMQKNTITAQNRKDPNQNTGISIHDCSLYAAPDFQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWLPSTGVAFLGGL 779
            RQFYRECDIYGTVDFIFGNAA + Q C IYARKPMA QKN ITA  R DPNQNTGISI +C++ AAPD  A   S  T+LGRPWK YSR V+M +Y+ D +QP GWLEWNG   LDT+YYGEY N GPG+    RV+W GY ++  A EA  FTV  F  G +WLP T + F GGL
Sbjct:  441 RQFYRECDIYGTVDFIFGNAAAIFQNCNIYARKPMAKQKNAITAHGRLDPNQNTGISIINCTIKAAPDLAAEPKSAMTFLGRPWKPYSRTVFMQSYISDIVQPVGWLEWNGTIGLDTIYYGEYSNFGPGANTNQRVQWLGYNLLNLA-EAMNFTVYNFTMGDTWLPQTDIPFYGGL 615          
BLAST of CV887304 vs. ExPASy Swiss-Prot
Match: PME_PRUPE (Pectinesterase/pectinesterase inhibitor PPE8B OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 2.376e-60
Identity = 108/179 (60.34%), Postives = 135/179 (75.42%), Query Frame = -1
Query:  246 RQFYRECDIYGTVDFIFGNAAVVLQKCAIYARKPMAMQKNTITAQNRKDPNQNTGISIHDCSLYAAPDFQA-SKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWLPSTGVAFLGGLSV 779
            RQFYR+C I GTVDFIFG+A VV Q C I A+K +  QKN+ITAQ RKDPN+ TGISI  C++ A  D +A S  S PTYLGRPWKLYSR V M +++ + I+P GWLEWNGDFAL++L+YGEYMN GPG+ +G RV+WPGY+V   +T+A  +TV+QFI G+ WLPSTGV +     V
Sbjct:  344 RQFYRDCKISGTVDFIFGDATVVFQNCQILAKKGLPNQKNSITAQGRKDPNEPTGISIQFCNITADSDLEAASVNSTPTYLGRPWKLYSRTVIMQSFLSNVIRPEGWLEWNGDFALNSLFYGEYMNYGPGAGLGSRVKWPGYQVFNESTQAKNYTVAQFIEGNLWLPSTGVKYTAEFGV 522          
BLAST of CV887304 vs. ExPASy Swiss-Prot
Match: PME20_ARATH (Probable pectinesterase/pectinesterase inhibitor 20 OS=Arabidopsis thaliana GN=PME20 PE=2 SV=2)

HSP 1 Score: 232.261 bits (591), Expect = 2.376e-60
Identity = 107/176 (60.80%), Postives = 128/176 (72.73%), Query Frame = -1
Query:  252 RQFYRECDIYGTVDFIFGNAAVVLQKCAIYARKPMAMQKNTITAQNRKDPNQNTGISIHDCSLYAAPDFQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWLPSTGVAFLGGL 779
            RQFYRECD+YGTVDFIFGNAAVVLQ C +Y R+P   Q N +TAQ R DPNQNTG +IH C++  A D   S  ++ TYLGRPWK YSR V M TY+   ++P GW  W+GDFAL TLYY EY N+GPGS   +RV WPGY VI +AT+AS FTV+ F+ G  W+  TGV F+GGL
Sbjct:  384 RQFYRECDVYGTVDFIFGNAAVVLQNCNLYPRQPRKGQSNEVTAQGRTDPNQNTGTAIHGCTIRPADDLATSNYTVKTYLGRPWKEYSRTVVMQTYIDGFLEPSGWNAWSGDFALSTLYYAEYNNTGPGSDTTNRVTWPGYHVI-NATDASNFTVTNFLVGEGWIGQTGVPFVGGL 558          
BLAST of CV887304 vs. ExPASy Swiss-Prot
Match: PME41_ARATH (Probable pectinesterase/pectinesterase inhibitor 41 OS=Arabidopsis thaliana GN=PME41 PE=2 SV=2)

HSP 1 Score: 231.491 bits (589), Expect = 4.052e-60
Identity = 107/176 (60.80%), Postives = 130/176 (73.86%), Query Frame = -1
Query:  252 RQFYRECDIYGTVDFIFGNAAVVLQKCAIYARKPMAMQKNTITAQNRKDPNQNTGISIHDCSLYAAPDFQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWLPSTGVAFLGGL 779
            RQFYRECDIYGTVDFIFGNAAVV Q C +Y R+PM  Q N ITAQ R DPNQNTGISIH+C++  A D  +S  ++ TYLGRPWK YSR V+M +Y+ + ++P GW EWNGDFAL TLYY EY N+G GS+   RV WPGY VI S T+A+ FTV  F+ G  W+  +GV ++ GL
Sbjct:  397 RQFYRECDIYGTVDFIFGNAAVVFQDCNLYPRQPMQNQFNAITAQGRTDPNQNTGISIHNCTIKPADDLVSSNYTVKTYLGRPWKEYSRTVFMQSYIDEVVEPVGWREWNGDFALSTLYYAEYNNTGSGSSTTDRVVWPGYHVINS-TDANNFTVENFLLGDGWMVQSGVPYISGL 571          
BLAST of CV887304 vs. ExPASy Swiss-Prot
Match: PME32_ARATH (Probable pectinesterase/pectinesterase inhibitor 32 OS=Arabidopsis thaliana GN=PME32 PE=2 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 5.292e-60
Identity = 106/176 (60.23%), Postives = 131/176 (74.43%), Query Frame = -1
Query:  252 RQFYRECDIYGTVDFIFGNAAVVLQKCAIYARKPMAMQKNTITAQNRKDPNQNTGISIHDCSLYAAPDFQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWLPSTGVAFLGGL 779
            RQF+REC I GTVDFIFG+A  V Q C I A++ +  QKN+ITAQ RKDPN+ TG +I   ++ A  D   +  +  TYLGRPWKLYSR V+M  YM D I P GWLEWNG+FALDTLYYGEYMNSGPG+++  RV+WPGY V+ ++ EA+ FTVSQ I G+ WLPSTG+ F+ GL
Sbjct:  350 RQFFRECIITGTVDFIFGDATAVFQSCQIKAKQGLPNQKNSITAQGRKDPNEPTGFTIQFSNIAADTDLLLNLNTTATYLGRPWKLYSRTVFMQNYMSDAINPVGWLEWNGNFALDTLYYGEYMNSGPGASLDRRVKWPGYHVLNTSAEANNFTVSQLIQGNLWLPSTGITFIAGL 525          
BLAST of CV887304 vs. ExPASy Swiss-Prot
Match: PME17_ARATH (Probable pectinesterase/pectinesterase inhibitor 17 OS=Arabidopsis thaliana GN=PME17 PE=2 SV=2)

HSP 1 Score: 230.335 bits (586), Expect = 9.027e-60
Identity = 109/177 (61.58%), Postives = 134/177 (75.71%), Query Frame = -1
Query:  252 NRQFYRECDIYGTVDFIFGNAAVVLQKCAIYARKPMAMQKNTITAQNRKDPNQNTGISIHDCSLYAAPDFQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWLPSTGVAFLGGL 782
            NRQFYR+CD+YGTVDFIFGNAA VLQ C I+AR+P + + NTITAQ R DPNQNTGI IH+  + AA D +   GS  TYLGRPW+ YSR V+M T +   I PRGWLEW+G+FAL TL+Y E+ N+GPG++   RV WPG+RV+ SA+EASKFTV  F+ G SW+PS+ V F  GL
Sbjct:  337 NRQFYRDCDVYGTVDFIFGNAAAVLQNCNIFARRPRS-KTNTITAQGRSDPNQNTGIIIHNSRVTAASDLRPVLGSTKTYLGRPWRQYSRTVFMKTSLDSLIDPRGWLEWDGNFALKTLFYAEFQNTGPGASTSGRVTWPGFRVLGSASEASKFTVGTFLAGGSWIPSS-VPFTSGL 511          
BLAST of CV887304 vs. ExPASy Swiss-Prot
Match: PME3_SOLLC (Pectinesterase 3 OS=Solanum lycopersicum GN=PME3 PE=3 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 7.642e-59
Identity = 106/176 (60.23%), Postives = 123/176 (69.89%), Query Frame = -1
Query:  252 RQFYRECDIYGTVDFIFGNAAVVLQKCAIYARKPMAMQKNTITAQNRKDPNQNTGISIHDCSLYAAPDFQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWLPSTGVAFLGGL 779
            RQFYR+  + GTVDFIFGNAAVV QKC I ARKP   QKN +TAQ R DPNQ TG SI  C + A+PD +       TYLGRPWK +SR V M +Y+  HI P GW EW GDFAL TLYYGE+MN+GPG+    RV+WPGY VIT   EA  FTV++ I G SWL ST VA++ GL
Sbjct:  367 RQFYRDSYVTGTVDFIFGNAAVVFQKCQIVARKPNKRQKNMVTAQGRTDPNQATGTSIQFCDIIASPDLEPVMNEYKTYLGRPWKKHSRTVVMQSYLDGHIDPSGWFEWRGDFALKTLYYGEFMNNGPGAGTSKRVKWPGYHVITDPNEAMPFTVAELIQGGSWLNSTSVAYVEGL 542          
The following BLAST results are available for this feature:
BLAST of CV887304 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 82
Match NameE-valueIdentityDescription
PME61_ARATH6.864e-8480.90Probable pectinesterase/pectinesterase inhibitor 6... [more]
PME34_ARATH1.582e-8076.54Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME2_CITSI2.998e-6363.07Pectinesterase 2 OS=Citrus sinensis GN=PECS-2.1 PE... [more]
PME25_ARATH1.260e-6163.07Probable pectinesterase/pectinesterase inhibitor 2... [more]
PME_PRUPE2.376e-6060.34Pectinesterase/pectinesterase inhibitor PPE8B OS=P... [more]
PME20_ARATH2.376e-6060.80Probable pectinesterase/pectinesterase inhibitor 2... [more]
PME41_ARATH4.052e-6060.80Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME32_ARATH5.292e-6060.23Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME17_ARATH9.027e-6061.58Probable pectinesterase/pectinesterase inhibitor 1... [more]
PME3_SOLLC7.642e-5960.23Pectinesterase 3 OS=Solanum lycopersicum GN=PME3 P... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_030E03_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_030_T7_E03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV887304 ID=CV887304; Name=CV887304; organism=Citrus sinensis; type=EST; length=782bp
TTTTTTTTTTTTTTTTTCCATTTTAAAGACCGGTCACAAATATTATTACT
TTATTACAACATCAAGCACGAAAAAAATGAAACCAGAAAATTATACAATT
GCGAAAGAAATATTTAGAATTTAACCTCCCCGTGTGTGTGTGTGCATGCA
GTAAGTAAAATTCCATTTGATCCTTCCAACACTCATGAGACCCACCTATA
TATAATAAGTATACGTACTAAAAAGTTAAATTAAAATTCACTTTAAACCG
AAAGCCCACCCAAGAAAGCCACCCCAGTCGACGGCAGCCACGACGACCCG
TAAATAAACTGCGACACAGTGAATTTACTTGCCTCCGTCGCCGACGTTAT
AACCCGGTAACCCGGCCACCTCACCCGGTGCCCCACGGCCGAACCCGGGC
CGGAGTTCATGTACTCGCCGTAGTATAAAGTATCCAGTGCAAAGTCTCCA
TTCCATTCAAGCCAGCCTCTGGGTTGGATGTGGTCACCCATGTACGTTAA
CATGTACACAACCCTCGAGTAGAGCTTCCACGGCCGGCCTAGGTACGTGG
GGATGCTGCCTTTCGAGGCCTGAAAATCGGGGGCGGCGTAAAGGCTGCAG
TCGTGGATTGAGATGCCCGTGTTCTGATTAGGGTCTTTCCTGTTCTGCGC
CGTGATGGTGTTCTTCTGCATGGCCATCGGCTTGCGAGCGTAGATGGCGC
ACTTCTGTAAGACCACGGCGGCGTTCCCGAAGATGAAGTCCACGGTGCCG
TAGATGTCGCACTCGCGGTAGAACTGCCGGTT
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