CV887303
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV887303 vs. ExPASy Swiss-Prot
Match: PME61_ARATH (Probable pectinesterase/pectinesterase inhibitor 61 OS=Arabidopsis thaliana GN=PME61 PE=1 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 3.420e-49 Identity = 105/207 (50.72%), Postives = 139/207 (67.15%), Query Frame = 3 Query: 75 MGYGRLQPSSDPGGSSFREDQPGHATSAPQPXXXXXXXXXXXXXXXFALIIASAVSAVLLVGLKTRAVG---PTIGHKPTQAISRTCSKTLYPNLCVSSLLNFPGSLTASEQDLVHISFNMTLQHFSRALYFTSGISYLQMDPHVRSAFDDCLELLDDSVDALSRSLGSVLLLPGGDINKREDVLTWLSAALTNHDTCSEGFEDLNG 686 MGY RL PS G S+ + P ATS P+ A+++ V + G++ G P + KPTQAISRTCSK+LYPNLC+ +LL+FPGSLTA E +L+HISFN TLQ FS+ALY +S I+Y QM P VRSA+D CLELLDDSVDAL+R+L SV+++ G + DV+TWLS+A+TNHDTC++GF+++ G Sbjct: 1 MGYDRLGPS---GPSNPNQKDP--ATSLPE---LQKKTKTKLILFTLAVLVVGVVCFGIFAGIRAVDSGKTEPKLTRKPTQAISRTCSKSLYPNLCIDTLLDFPGSLTADENELIHISFNATLQKFSKALYTSSTITYTQMPPRVRSAYDSCLELLDDSVDALTRALSSVVVVSGDE--SHSDVMTWLSSAMTNHDTCTDGFDEIEG 197
BLAST of CV887303 vs. ExPASy Swiss-Prot
Match: PME34_ARATH (Probable pectinesterase/pectinesterase inhibitor 34 OS=Arabidopsis thaliana GN=PME34 PE=2 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 3.428e-41 Identity = 93/211 (44.08%), Postives = 128/211 (60.66%), Query Frame = 3 Query: 75 MGYGRLQPSSDPGG---SSFREDQPGHATSAPQPXXXXXXXXXXXXXXXFALIIASAVSAVLLVGLKTRAV----GPTIGHKPTQAISRTCSKTLYPNLCVSSLLNFPGSLTASE-QDLVHISFNMTLQHFSRALYFTSGISYLQMDPHVRSAFDDCLELLDDSVDALSRSLGSVLLLPGGDINKREDVLTWLSAALTNHDTCSEGFEDLN 683 MGY RL PS G S+ +++ QP L I+ ++A + G+++R P + KP+QAIS+ C T +P LCV SL++FPGSL AS +DL+H++ NMTL HFS ALY ++ +S++ M P RSA+D C+ELLDDSVDALSR+L SV+ K +DV TWLSAALTNHDTC+EGF+ ++ Sbjct: 1 MGYERLGPSGATGSVTTSTTTAPILNQVSTSEQPENNNRRSKKKLVVSSIVLAISLILAAAIFAGVRSRLKLNQSVPGLARKPSQAISKACELTRFPELCVDSLMDFPGSLAASSSKDLIHVTVNMTLHHFSHALYSSASLSFVDMPPRARSAYDSCVELLDDSVDALSRALSSVV----SSSAKPQDVTTWLSAALTNHDTCTEGFDGVD 207
BLAST of CV887303 vs. ExPASy Swiss-Prot
Match: PME1_ARATH (Pectinesterase 1 OS=Arabidopsis thaliana GN=PME1 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.560e-12 Identity = 44/175 (25.14%), Postives = 83/175 (47.43%), Query Frame = 3 Query: 222 IIASAVSAVLLVGLKTRAVGPTIGHK--------------PTQAISRTCSKTLYPNLCVSSLLNFPGSLTASEQDLVHISFNMTLQHFSRALYFTSGISYLQMDPHVRSAFDDCLELLDDSVDALSRSLGSVLLLPGGDINKR--------EDVLTWLSAALTNHDTCSEGFEDL 680 ++ ++S V+L+ + AV T+ HK P+ ++ CS T +P C+SS+ P S T + L +S + + +S D ++SA C +L++D++D L+ ++ ++ D K+ ED+ TWLSA +T+H+TC + ++L Sbjct: 29 LLLLSISVVVLIAVIIAAVVATVVHKNKNESTPSPPPELTPSTSLKAICSVTRFPESCISSISKLPSSNTTDPETLFKLSLKVIIDELDSISDLPEKLSKETEDERIKSALRVCGDLIEDALDRLNDTVSAI-----DDEEKKKTLSSSKIEDLKTWLSATVTDHETCFDSLDEL 198
BLAST of CV887303 vs. ExPASy Swiss-Prot
Match: PMEU1_SOLLC (Pectinesterase/pectinesterase inhibitor U1 OS=Solanum lycopersicum GN=PMEU1 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.367e-12 Identity = 48/165 (29.09%), Postives = 85/165 (51.52%), Query Frame = 3 Query: 219 LIIASAVSAVLLVGLKTRAVGPTIGHKPTQAISRT--------CSKTLYPNLCVSSLLNFP--GSLTASEQDLVHISFNMTLQHFSRALYFTSGISYLQ--MDPHVRSAFDDCLELLDDSVDALSRSLGSVLLLPGGDINKR--EDVLTWLSAALTNHDTCSEGF 671 L++A+ + V G+K+ + H AIS + CS TL+P LC S+++N S++D++ +S N+T++ R Y + + + P + A DCLE +D+++D L ++ + L P K ED+ T +S+A+TN +TC +GF Sbjct: 30 LLVAAVIGVV--AGVKSHSKNSD-DHADIMAISSSAHAIVKSACSNTLHPELCYSAIVNVSDFSKKVTSQKDVIELSLNITVKAVRRNYYAVKELIKTRKGLTPREKVALHDCLETMDETLDELHTAVEDLELYPNKKSLKEHVEDLKTLISSAITNQETCLDGF 191
BLAST of CV887303 vs. ExPASy Swiss-Prot
Match: PME21_ARATH (Probable pectinesterase/pectinesterase inhibitor 21 OS=Arabidopsis thaliana GN=PME21 PE=2 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 1.659e-11 Identity = 51/164 (31.10%), Postives = 78/164 (47.56%), Query Frame = 3 Query: 219 LIIASAVSAVLLVGLKTR---AVGPTIGHKPTQAISRTCSKTLYPNLCVSSLLNFPGSLTASEQDLVHISFNMTLQHFSRALYFTSGISYLQMDPHVRSAFDDCLELLDDSVDALSRSLGSV-----LLLPGGDINKREDVLTWLSAALTNHDTCSEGFEDLNG 686 L+I+ V+ + V L + G + +A+ C+ T Y C +L+ G T +LV +FN+T++ + A + I LQ D R A D C EL+D ++D LS S + LL IN R WLSAA+++ +TC EGF+ G Sbjct: 24 LLISMVVAVTVGVSLNKHDGDSKGKAEVNASVKAVKDVCAPTDYRKTCEDTLIK-NGKNTTDPMELVKTAFNVTMKQITDAAKKSQTIMELQKDSRTRMALDQCKELMDYALDELSNSFEELGKFEFHLLDEALINLR----IWLSAAISHEETCLEGFQGTQG 182
BLAST of CV887303 vs. ExPASy Swiss-Prot
Match: PME3_ARATH (Pectinesterase/pectinesterase inhibitor 3 OS=Arabidopsis thaliana GN=PME3 PE=2 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 2.167e-11 Identity = 41/156 (26.28%), Postives = 78/156 (50.00%), Query Frame = 3 Query: 216 ALIIASAVSAVLLVGLKTRAVGPTIGHKPTQAISRTCSKTLYPNLCVSSLLNFPGSLTASEQDLVHISFNMTLQHFSRALYFTSGISYLQ--MDPHVRSAFDDCLELLDDSVDALSRSLGSVLLLPGGDINKRE--DVLTWLSAALTNHDTCSEGF 671 AL+ +AV+ + G T+ + +CS T YP LC+S+++ G S++D++ S N+T+ + + + + P ++A DCLE +D+++D L ++ + L P + D+ T +S+A+TN +TC +GF Sbjct: 28 ALLFVAAVAGIS-AGASKANEKRTLSPSSHAVLRSSCSSTRYPELCISAVVTAGGVELTSQKDVIEASVNLTITAVEHNYFTVKKLIKKRKGLTPREKTALHDCLETIDETLDELHETVEDLHLYPTKKTLREHAGDLKTLISSAITNQETCLDGF 182
BLAST of CV887303 vs. ExPASy Swiss-Prot
Match: PME3_CITSI (Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.828e-11 Identity = 48/166 (28.92%), Postives = 84/166 (50.60%), Query Frame = 3 Query: 213 FALIIASAVSAVLLVGLKTRAVGPTIGHKPTQAISRT-CSKTLYPNLCVSSLLNFP--GSLTASEQDLVHISFNMTLQHFSRALYFTSGISYL----QMDPHVRSAFDDCLELLDDSVDALSRSLGSVLLLPGGDINKR------EDVLTWLSAALTNHDTCSEGF 671 FA ++ A ++ G+ +R G++P AI ++ CS T YP+LC S++ P S++D++ +S N+T + GI L + + A DCLE +D+++D L +++ + P NK+ +D+ T +SAA+TN TC +GF Sbjct: 35 FATLLVVAAVIGIVAGVNSRKNSGDNGNEPHHAILKSSCSSTRYPDLCFSAIAAVPEASKKVTSQKDVIEMSLNITTTAVEHNYF---GIQKLLKRTNLTKREKVALHDCLETIDETLDELHKAVEDLEEYP----NKKSLSQHADDLKTLMSAAMTNQGTCLDGF 193
BLAST of CV887303 vs. ExPASy Swiss-Prot
Match: PME1_CITSI (Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.828e-11 Identity = 48/166 (28.92%), Postives = 84/166 (50.60%), Query Frame = 3 Query: 213 FALIIASAVSAVLLVGLKTRAVGPTIGHKPTQAISRT-CSKTLYPNLCVSSLLNFP--GSLTASEQDLVHISFNMTLQHFSRALYFTSGISYL----QMDPHVRSAFDDCLELLDDSVDALSRSLGSVLLLPGGDINKR------EDVLTWLSAALTNHDTCSEGF 671 FA ++ A ++ G+ +R G++P AI ++ CS T YP+LC S++ P S++D++ +S N+T + GI L + + A DCLE +D+++D L +++ + P NK+ +D+ T +SAA+TN TC +GF Sbjct: 35 FATLLVVAAVIGIVAGVNSRKNSGDNGNEPHHAILKSSCSSTRYPDLCFSAIAAVPEASKKVTSQKDVIEMSLNITTTAVEHNYF---GIQKLLKRTNLTKREKVALHDCLETIDETLDELHKAVEDLEEYP----NKKSLSQHADDLKTLMSAAMTNQGTCLDGF 193 The following BLAST results are available for this feature:
BLAST of CV887303 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CV887303 ID=CV887303; Name=CV887303; organism=Citrus sinensis; type=EST; length=694bpback to top |