CV887283

Overview
NameCV887283
Unique NameCV887283
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length842
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CV887283 vs. ExPASy Swiss-Prot
Match: YJ72_SCHPO (Uncharacterized protein C757.02c OS=Schizosaccharomyces pombe GN=SPCC757.02c PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.472e-15
Identity = 53/175 (30.29%), Postives = 84/175 (48.00%), Query Frame = 3 
Query:  297 LSQLTDVTHIFYTTWASSPTEVENCQINGAMLRNVLHSV-IPSAPNLRHICLVTGAKHYLGPFEVATRRMKSHPLEPPFTEDLPRLNMPNFYYTQEDILFEEVEKREGLTWSVHRPHLVFGFSPYSLMNVVGTLCVYAALCKHEGIPLLFPGTKDCWEGFSVASDADLIAEQQIW 818
            L  +  + + ++  +     E + C++NG MLRN + ++ + S   LR + L TG K Y          M    +  P T        PNFYY QEDIL +E    +   +++  P+ + G S  S MN   T+ +YA +C+    P  FPG +  + GF   S + LIA+ Q+W
Sbjct:   70 LEGVKGINYAYFAAYKEENNEEKLCEVNGNMLRNFVQALELTSIQTLRRVILTTGLKFYGLHLGEVRLPMIETDIRVPETFS----GTPNFYYVQEDIL-KEFSNGKKWDYTIAMPNDICGVSKGSYMNEAFTIALYALVCRELHEPFRFPGNEKFYLGFDDISYSKLIADFQLW 239
The following BLAST results are available for this feature:
BLAST of CV887283 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
YJ72_SCHPO4.472e-1530.29Uncharacterized protein C757.02c OS=Schizosaccharo... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS04_2_030D03_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_030_T3_D03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV887283 ID=CV887283; Name=CV887283; organism=Citrus sinensis; type=EST; length=842bp
GTAGTTGACGCCTCCTGAAAGAAGAAGTAAAAAAAATGAGCTGGTGGTGG
GCAGGTGCAATTGGCGCTGCTAAGAAGAAACTGGGAGAAGATGATGAGCG
AAACGTGGGACTTGTAATAGGTGTGACAGGAATATTAGGCAACAGCCTTG
CTGAGATTTTGCCTCGGCCAGATACTCCTGGGGGTCCATGGAAGGTTTAC
GGAGTGGCCCGACGTCCCAGGCCTCACTGGAACGCTGACCACCCGATTGA
GTACATCCAATGCGACGTCTCCGACCCTCAACAGACACAAACCAAGCTCT
CACAACTCACTGACGTCACCCACATCTTCTACACGACGTGGGCCAGCAGT
CCCACTGAAGTCGAGAACTGCCAGATCAACGGTGCCATGCTTCGTAACGT
GCTCCACTCTGTAATCCCGAGCGCGCCTAATCTCCGCCACATTTGTCTGG
TAACGGGCGCAAAACATTACTTGGGACCATTCGAGGTGGCAACTCGCAGG
ATGAAGTCTCACCCTCTCGAGCCGCCTTTTACTGAGGATTTACCAAGGTT
AAATATGCCAAATTTTTACTACACCCAGGAAGACATATTGTTTGAAGAAG
TTGAAAAACGGGAGGGTTTGACTTGGTCCGTACACCGTCCTCATTTAGTA
TTTGGATTTTCACCGTACAGTTTGATGAATGTTGTCGGAACTCTCTGTGT
GTACGCAGCCTTATGTAAACATGAAGGTATTCCGTTATTATTTCCCGGGA
CTAAAGATTGTTGGGAAGGCTTCTCGGTTGCTTCGGACGCAGACTTGATT
GCCGAGCAGCAAATCTGGGCGGTAGTGGATCCTCGCGCAAGA
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