CV887275

Overview
NameCV887275
Unique NameCV887275
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length751
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV887275 vs. ExPASy Swiss-Prot
Match: PSA7_CICAR (Proteasome subunit alpha type-7 OS=Cicer arietinum GN=PAD1 PE=2 SV=1)

HSP 1 Score: 326.635 bits (836), Expect = 8.654e-89
Identity = 165/194 (85.05%), Postives = 177/194 (91.24%), Query Frame = -3
Query:  168 DSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSGQETIKLAIRALLEVVESGGKNIEVAVMTREKGLKQLDEAEIDAMVXXXXXXXXXXXXXXKGPPKET 749
            D+RSVRKIV+LD+HIALACAGLKADARVLINRAR+ECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTG PSLYQTDPSGTFSAWKANATGRNSNS+REFLEKN+KETSGQET+KLAIRALLEVVESGGKNIEVAVMT+E GL+QL+EAEIDA+V              K PPK+T
Sbjct:   56 DTRSVRKIVNLDDHIALACAGLKADARVLINRARVECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGSPSLYQTDPSGTFSAWKANATGRNSNSIREFLEKNFKETSGQETVKLAIRALLEVVESGGKNIEVAVMTKENGLRQLEEAEIDAIVAEIEAEKAAAEAAKKAPPKDT 249          
BLAST of CV887275 vs. ExPASy Swiss-Prot
Match: PSA7B_ARATH (Proteasome subunit alpha type-7-B OS=Arabidopsis thaliana GN=PAD2 PE=1 SV=2)

HSP 1 Score: 324.709 bits (831), Expect = 3.288e-88
Identity = 168/195 (86.15%), Postives = 178/195 (91.28%), Query Frame = -3
Query:  168 DSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSGQETIKLAIRALLEVVESGGKNIEVAVMTREK-GLKQLDEAEIDAMVXXXXXXXXXXXXXXKGPPKET 749
            DSRS RKIVSLDNHIALACAGLKADARVLIN+ARIECQSHRLT+EDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPY+ +PSLYQTDPSGTFSAWKANATGRNSNS+REFLEKNYKE+SGQETIKLAIRALLEVVESGGKNIEVAVMTRE+ GL+QL+EAEIDA+V              KGPPKET
Sbjct:   56 DSRSARKIVSLDNHIALACAGLKADARVLINKARIECQSHRLTLEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYSRLPSLYQTDPSGTFSAWKANATGRNSNSIREFLEKNYKESSGQETIKLAIRALLEVVESGGKNIEVAVMTREETGLRQLEEAEIDAIVAKIEAEKAAAEAAKKGPPKET 250          
BLAST of CV887275 vs. ExPASy Swiss-Prot
Match: PSA7_SOLLC (Proteasome subunit alpha type-7 OS=Solanum lycopersicum GN=PAD1 PE=2 SV=1)

HSP 1 Score: 323.939 bits (829), Expect = 5.609e-88
Identity = 161/173 (93.06%), Postives = 171/173 (98.84%), Query Frame = -3
Query:  231 DSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSGQETIKLAIRALLEVVESGGKNIEVAVMTREKGLKQLDEAEIDAMV 749
            DSRSVRKIV+LD+HIALACAGLKADARVL+N+ARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLI+GFDP+TGVPSLYQTDPSGTFSAWKANATGRNSNS REFLEKNYKETSGQET+KLAIRALLEVVESGGKNIEVAVMT+E GLKQL+EAEIDA+V
Sbjct:   56 DSRSVRKIVNLDDHIALACAGLKADARVLVNKARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIIGFDPHTGVPSLYQTDPSGTFSAWKANATGRNSNSTREFLEKNYKETSGQETVKLAIRALLEVVESGGKNIEVAVMTKEHGLKQLEEAEIDAIV 228          
BLAST of CV887275 vs. ExPASy Swiss-Prot
Match: PSA7A_ARATH (Proteasome subunit alpha type-7-A OS=Arabidopsis thaliana GN=PAD1 PE=1 SV=1)

HSP 1 Score: 318.546 bits (815), Expect = 2.357e-86
Identity = 164/195 (84.10%), Postives = 175/195 (89.74%), Query Frame = -3
Query:  168 DSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSGQETIKLAIRALLEVVESGGKNIEVAVMTREKG-LKQLDEAEIDAMVXXXXXXXXXXXXXXKGPPKET 749
            DSRS RKIVSLDNHIALACAGLKADARVLIN+ARIECQSHRLT+EDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYT +P+LYQTDPSGTFSAWKANATGRNSNS+REFLEKNYKE++GQET+KLAIRALLEVVESGGKNIEVAVMTRE+G LKQL+E EID +V              KGP KET
Sbjct:   56 DSRSARKIVSLDNHIALACAGLKADARVLINKARIECQSHRLTLEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTRIPALYQTDPSGTFSAWKANATGRNSNSIREFLEKNYKESAGQETVKLAIRALLEVVESGGKNIEVAVMTREEGVLKQLEEEEIDIIVAEIEAEKAAAEAAKKGPAKET 250          
BLAST of CV887275 vs. ExPASy Swiss-Prot
Match: PSA7B_ORYSJ (Proteasome subunit alpha type-7-B OS=Oryza sativa subsp. japonica GN=PAD1 PE=2 SV=1)

HSP 1 Score: 317.005 bits (811), Expect = 6.857e-86
Identity = 163/194 (84.02%), Postives = 171/194 (88.14%), Query Frame = -3
Query:  168 DSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSGQETIKLAIRALLEVVESGGKNIEVAVMTREKGLKQLDEAEIDAMVXXXXXXXXXXXXXXKGPPKET 749
            DSRSVRKI SLD HIALACAGLKADARVLINRAR+ECQSHRLTVED VTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYT  P+LYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSG+ETIKLAIRALLEVVESGGKNIE+AVMT++ GL+QL+EAEID  V              KG PKET
Sbjct:   56 DSRSVRKIASLDTHIALACAGLKADARVLINRARVECQSHRLTVEDAVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTDKPALYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSGKETIKLAIRALLEVVESGGKNIEIAVMTQKDGLRQLEEAEIDEYVAEIEAEKAAAEAAKKGAPKET 249          
BLAST of CV887275 vs. ExPASy Swiss-Prot
Match: PSA7B_ORYSI (Proteasome subunit alpha type-7-B OS=Oryza sativa subsp. indica GN=PAD1 PE=2 SV=1)

HSP 1 Score: 317.005 bits (811), Expect = 6.857e-86
Identity = 163/194 (84.02%), Postives = 171/194 (88.14%), Query Frame = -3
Query:  168 DSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSGQETIKLAIRALLEVVESGGKNIEVAVMTREKGLKQLDEAEIDAMVXXXXXXXXXXXXXXKGPPKET 749
            DSRSVRKI SLD HIALACAGLKADARVLINRAR+ECQSHRLTVED VTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYT  P+LYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSG+ETIKLAIRALLEVVESGGKNIE+AVMT++ GL+QL+EAEID  V              KG PKET
Sbjct:   56 DSRSVRKIASLDTHIALACAGLKADARVLINRARVECQSHRLTVEDAVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTDKPALYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSGKETIKLAIRALLEVVESGGKNIEIAVMTQKDGLRQLEEAEIDEYVAEIEAEKAAAEAAKKGAPKET 249          
BLAST of CV887275 vs. ExPASy Swiss-Prot
Match: PSA7A_ORYSJ (Proteasome subunit alpha type-7-A OS=Oryza sativa subsp. japonica GN=Os08g0548900 PE=2 SV=1)

HSP 1 Score: 315.849 bits (808), Expect = 1.527e-85
Identity = 161/194 (82.99%), Postives = 171/194 (88.14%), Query Frame = -3
Query:  168 DSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSGQETIKLAIRALLEVVESGGKNIEVAVMTREKGLKQLDEAEIDAMVXXXXXXXXXXXXXXKGPPKET 749
            DSRS+RKI SLD HIALACAGLKADARVLINRAR+ECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYT  P+LYQTDPSGTFSAWKANATGRNSNSMREFLEKNYK+TSG+ETIKLAIRALLEVVESGGKNIE+AVMT + GL++L+EAEID  V              KG PKET
Sbjct:   56 DSRSMRKIASLDTHIALACAGLKADARVLINRARVECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTEKPALYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKDTSGKETIKLAIRALLEVVESGGKNIEIAVMTHKDGLRELEEAEIDEYVAEIEAEKAAAEAAKKGAPKET 249          
BLAST of CV887275 vs. ExPASy Swiss-Prot
Match: PSA7A_ORYSI (Proteasome subunit alpha type-7-A OS=Oryza sativa subsp. indica GN=OsI_029135 PE=2 SV=2)

HSP 1 Score: 315.849 bits (808), Expect = 1.527e-85
Identity = 161/194 (82.99%), Postives = 171/194 (88.14%), Query Frame = -3
Query:  168 DSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSGQETIKLAIRALLEVVESGGKNIEVAVMTREKGLKQLDEAEIDAMVXXXXXXXXXXXXXXKGPPKET 749
            DSRS+RKI SLD HIALACAGLKADARVLINRAR+ECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYT  P+LYQTDPSGTFSAWKANATGRNSNSMREFLEKNYK+TSG+ETIKLAIRALLEVVESGGKNIE+AVMT + GL++L+EAEID  V              KG PKET
Sbjct:   56 DSRSMRKIASLDTHIALACAGLKADARVLINRARVECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTEKPALYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKDTSGKETIKLAIRALLEVVESGGKNIEIAVMTHKDGLRELEEAEIDEYVAEIEAEKAAAEAAKKGAPKET 249          
BLAST of CV887275 vs. ExPASy Swiss-Prot
Match: PSA7_CARAU (Proteasome subunit alpha type-7 OS=Carassius auratus GN=psma7 PE=2 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 1.701e-60
Identity = 117/176 (66.48%), Postives = 144/176 (81.82%), Query Frame = -3
Query:  231 DSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKE---TSGQETIKLAIRALLEVVESGGKNIEVAVMTREKGLKQLDEAEIDAMV 749
            + R+VRKI +LD H+ +A AGL ADAR++INRAR+ECQSHRLTVEDPVTVEYITRYIA L+Q+YTQS G RPFG+S LIVGFD + G P LYQTDPSGT+ AWKANA GR++ ++REFLEKNY +    S  + IKLAI+ALLEVV+SGGKNIE+AV+ R + LK L+  EI+ +V
Sbjct:   57 EERTVRKICALDEHVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIATLKQRYTQSNGRRPFGISALIVGFD-FDGTPRLYQTDPSGTYHAWKANAIGRSAKTVREFLEKNYTDEAIASDNDAIKLAIKALLEVVQSGGKNIELAVIRRNQPLKILESKEIETLV 231          
BLAST of CV887275 vs. ExPASy Swiss-Prot
Match: PSA7_HUMAN (Proteasome subunit alpha type-7 OS=Homo sapiens GN=PSMA7 PE=1 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 3.789e-60
Identity = 118/176 (67.05%), Postives = 144/176 (81.82%), Query Frame = -3
Query:  231 DSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSGQE---TIKLAIRALLEVVESGGKNIEVAVMTREKGLKQLDEAEIDAMV 749
            D R+VRKI +LD+++ +A AGL ADAR++INRAR+ECQSHRLTVEDPVTVEYITRYIA L+Q+YTQS G RPFG+S LIVGFD + G P LYQTDPSGT+ AWKANA GR + S+REFLEKNY + + +    TIKL I+ALLEVV+SGGKNIE+AVM R++ LK L+  EI+  V
Sbjct:   55 DERTVRKICALDDNVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFD-FDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDEAIETDDLTIKLVIKALLEVVQSGGKNIELAVMRRDQSLKILNPEEIEKYV 229          
The following BLAST results are available for this feature:
BLAST of CV887275 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 166
Match NameE-valueIdentityDescription
PSA7_CICAR8.654e-8985.05Proteasome subunit alpha type-7 OS=Cicer arietinum... [more]
PSA7B_ARATH3.288e-8886.15Proteasome subunit alpha type-7-B OS=Arabidopsis t... [more]
PSA7_SOLLC5.609e-8893.06Proteasome subunit alpha type-7 OS=Solanum lycoper... [more]
PSA7A_ARATH2.357e-8684.10Proteasome subunit alpha type-7-A OS=Arabidopsis t... [more]
PSA7B_ORYSJ6.857e-8684.02Proteasome subunit alpha type-7-B OS=Oryza sativa ... [more]
PSA7B_ORYSI6.857e-8684.02Proteasome subunit alpha type-7-B OS=Oryza sativa ... [more]
PSA7A_ORYSJ1.527e-8582.99Proteasome subunit alpha type-7-A OS=Oryza sativa ... [more]
PSA7A_ORYSI1.527e-8582.99Proteasome subunit alpha type-7-A OS=Oryza sativa ... [more]
PSA7_CARAU1.701e-6066.48Proteasome subunit alpha type-7 OS=Carassius aurat... [more]
PSA7_HUMAN3.789e-6067.05Proteasome subunit alpha type-7 OS=Homo sapiens GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_030C11_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_030_T3_C11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV887275 ID=CV887275; Name=CV887275; organism=Citrus sinensis; type=EST; length=751bp
TGACCATATAAGAAAATTTAAGCTGGCAATAATCTGGTGCTCTGTTATAT
CTTTTGAATGCAAATCTAAAAGCATATAAAACTTAACCACAAAAAAAGCA
TACTAAAATTCTGAAAGGTGAAAAACAACAGGCAATGGAAAAAACAGAAG
CCAGAACTAAAAACTCATGTTTCCTTGGGAGGTCCCTTCTTTGCAGCCTC
AGCGGCGGCCTTCTTTGCTTCAATCTCGGCTACCATGGCATCAATTTCAG
CTTCATCAAGCTGCTTCAGACCCTTCTCCCTTGTCATCACAGCAACTTCT
ATGTTTTTGCCCCCACTCTCAACAACCTCAAGTAATGCCCGAATTGCAAG
CTTTATAGTTTCTTGCCCGGAAGTTTCCTTATAGTTTTTCTCCAGAAACT
CCCTCATTGAATTAGAGTTTCTCCCAGTTGCATTAGCTTTCCAAGCAGAA
AATGTCCCAGAAGGATCTGTCTGATATAGTGATGGCACGCCAGTGTATGG
ATCAAAGCCCACAATCAGAGTAGAAAGACCAAATGGTCTCACACCACCGC
TTTGTGTGTACTTCTGCTGGAGACCTGCAATGTAACGAGTGATGTACTCA
ACAGTTACTGGGTCCTCAACAGTCAGCCTGTGGCTCTGACATTCTATTCG
AGCCCTGTTTATCAGTACACGAGCATCTGCTTTAAGTCCAGCACAGGCCA
ATGCAATATGATTATCCAAGCTGACAATCTTCCTCACTGATCTGGAGTCC
T
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