EL492505

Overview
NameEL492505
Unique NameEL492505
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length304
Libraries
Library NameType
Citrus sinensis flesh cDNA-AFLP Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig770 contig Csv1_Contig770:311..614. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of EL492505 vs. ExPASy Swiss-Prot
Match: MRH1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase MRH1 OS=Arabidopsis thaliana GN=MRH1 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 2.850e-18
Identity = 42/79 (53.16%), Postives = 56/79 (70.89%), Query Frame = 3 
Query:    9 ACEDFSNVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCXRRGAFHQ 245
            ACEDFSN+I +    TVYKGTLS+GVEI          K+W + +E+ +R+KIDTLS++NHKNFVNLIG+C     F++
Sbjct:  382 ACEDFSNIIETFDGYTVYKGTLSSGVEIAVASTAIAESKEWTRAMEMAYRRKIDTLSRINHKNFVNLIGYCEEDDPFNR 460
[Close]
BLAST of EL492505 vs. ExPASy Swiss-Prot
Match: Y5458_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g45840 OS=Arabidopsis thaliana GN=At5g45840 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 3.151e-17
Identity = 39/79 (49.37%), Postives = 56/79 (70.89%), Query Frame = 3 
Query:    9 ACEDFSNVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCXRRGAFHQ 245
            ACEDFSN+I +    TVYKGTLS+GVEI          ++W + +E+ +R++IDT+S+VNHKNF+NLIG+C     F++
Sbjct:  399 ACEDFSNIIEAFDGYTVYKGTLSSGVEIAVASTAILETREWTRAMEMTYRRRIDTMSRVNHKNFINLIGYCEEDEPFNR 477
The following BLAST results are available for this feature:
BLAST of EL492505 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
MRH1_ARATH2.850e-1853.16Probable LRR receptor-like serine/threonine-protei... [more]
Y5458_ARATH3.151e-1749.37Probable LRR receptor-like serine/threonine-protei... [more]
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Properties
Property NameValue
Genbank descriptionC1650 Citrus sinensis flesh cDNA-AFLP Library Citrus sinensis cDNA clone ClC1650, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EL492505 ID=EL492505; Name=EL492505; organism=Citrus sinensis; type=EST; length=304bp
ATTGAGCAGCTTGTGAAGATTTCAGTAATGTAATTGGTTCTTCACCGATT
GGTACGGTGTACAAAGGGACATTGTCTAATGGAGTTGAAATAGCTGTGGC
CTCTGTCTCAGTGGCATCTGCCAAGGATTGGCCTAAGAACTTAGAAGTGC
AGTTTAGGAAGAAGATTGACACGTTATCAAAAGTGAACCACAAAAATTTT
GTCAATCTTATTGGATTTTGTNGAAGAAGAGGAGCCTTTCACCAGAATGA
TGGTGTTTGAATATGCTCCTAATGGAACACTCTTTGAGCATATACACATT
ACTC
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