EL492504

Overview
NameEL492504
Unique NameEL492504
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length289
Libraries
Library NameType
Citrus sinensis flesh cDNA-AFLP Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EL492504 vs. ExPASy Swiss-Prot
Match: MRH1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase MRH1 OS=Arabidopsis thaliana GN=MRH1 PE=2 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.957e-11
Identity = 32/60 (53.33%), Postives = 41/60 (68.33%), Query Frame = 2 
Query:  110 SELEAACEDFSNVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDT 289
            SELE ACEDFSN+I +    TVYKGTLS+GVEI          K+W + +E+ +R+KIDT
Sbjct:  377 SELETACEDFSNIIETFDGYTVYKGTLSSGVEIAVASTAIAESKEWTRAMEMAYRRKIDT 436
The following BLAST results are available for this feature:
BLAST of EL492504 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
MRH1_ARATH9.957e-1153.33Probable LRR receptor-like serine/threonine-protei... [more]
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Properties
Property NameValue
Genbank descriptionC1642 Citrus sinensis flesh cDNA-AFLP Library Citrus sinensis cDNA clone ClC1642, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EL492504 ID=EL492504; Name=EL492504; organism=Citrus sinensis; type=EST; length=289bp
GACTGCGTAGTGATCCGACTGCGTAGTGATCTGACTGCGTAGTGATCCGA
CTGCGTAGTGATCCGACTGCGTAGTGATCTGACTGCGTAGTGATCTGACT
GCGTAGTGATCCGAGCTTGAAGCAGCTTGTGAAGATTTCAGTAATGTAAT
TGGTTCTTCACCGATTGGTACGGTGTACAAAGGGACATTGTCTAATGGAG
TTGAAATAGCTGTGGCCTCTGTCTCAGTGGCATCTGCCAAGGATTGGCCT
AAGAACTTAGAAGTGCAGTTTAGGAAGAAGATTGACACG
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