CV887245

Overview
NameCV887245
Unique NameCV887245
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length610
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CV887245 vs. ExPASy Swiss-Prot
Match: Y2309_ARATH (Uncharacterized protein At2g23090 OS=Arabidopsis thaliana GN=At2g23090 PE=1 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 3.183e-34
Identity = 67/78 (85.90%), Postives = 71/78 (91.03%), Query Frame = 3 
Query:   54 MGGGNGQKAKMAREKNLEKQKAANKGSQLETNKKAMSIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYACFPHLKK 287
            MGGGN QK+ MAR KNLEK KAA KGSQLE NKKAMSIQCKVCMQTF+CTTSEVKCREHAEAKHPK+D+ ACFPHLKK
Sbjct:    1 MGGGNAQKSAMARAKNLEKAKAAGKGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPKADVVACFPHLKK 78
The following BLAST results are available for this feature:
BLAST of CV887245 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y2309_ARATH3.183e-3485.90Uncharacterized protein At2g23090 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS04_2_030B07_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_030_T3_B07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV887245 ID=CV887245; Name=CV887245; organism=Citrus sinensis; type=EST; length=610bp
TGCATCTTCCGATCTACCTATTGATCAATCAATCAACTAGTTAGATTCAG
GACATGGGAGGAGGCAACGGTCAAAAGGCCAAGATGGCTCGTGAGAAGAA
TTTGGAGAAACAAAAAGCTGCCAACAAAGGAAGCCAATTGGAAACAAACA
AGAAAGCTATGTCGATCCAGTGCAAGGTGTGTATGCAGACATTCATGTGC
ACGACTTCAGAGGTGAAGTGCAGGGAGCATGCTGAAGCAAAGCACCCAAA
GAGTGACATTTATGCCTGCTTCCCCCATCTTAAGAAGTGATAAGAGTTTG
GGGGAAAATATTATATGCCAGATATAGTTGGGGACATAATCTTCCTTATT
GTATAGTGTTCCCTTTTCCAGCAATACCTCAGATTAAGTGTGTTGCGGTT
TGTAGAATCTGTTTGTTGCGGTTTGTAGAATCTGTGTGTGCATGTGAAGA
GGGACTGGTTCATTGTTCTGTTTTAATGGAATTTGTGTAATGTTATGGTA
ATTGATCTGTTCCTTTTATATTTCTTGAAGGCTGTGTGTTTGTGCTTCAT
CTATTTTAGGTCTGTTAATAATACAAATATAATGTTGGGATGCTAAAAAA
AAAAAAAAAA
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