CV887224
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV887224 vs. ExPASy Swiss-Prot
Match: VPS45_ARATH (Vacuolar protein sorting-associated protein 45 homolog OS=Arabidopsis thaliana GN=VPS45 PE=1 SV=2) HSP 1 Score: 310.071 bits (793), Expect = 1.090e-83 Identity = 150/173 (86.71%), Postives = 167/173 (96.53%), Query Frame = -1 Query: 361 IDRLRLVMLYALRYEKDSPVQLMQLFNKLASRSAKYKPGLVQFLLKQAGVDKRTGDLYGNRDFMNIARNMARGLKGVENVYTQHQPLLFQTMESIIKGRLRDVDYPFLGNHFQQGRPQDVIIFIVGGTTYEESRSVALENANNSGIRFILGGSVILNSKRFLKDLEEAQRTAK 879 IDRLRLVMLYALRYEK++PVQLMQLFNKLASRS KYKPGLVQFLLKQAGV+KRTGDL+GNRD +NIARNMARGLKGVENVYTQHQPLLFQTMESI +GRLRDVDYPF+G+HFQQGRPQ+V+IF+VGGTTYEESRSVAL+NA NSG+RFILGG+ +LNSKRFLKDLEEAQR ++ Sbjct: 391 IDRLRLVMLYALRYEKENPVQLMQLFNKLASRSPKYKPGLVQFLLKQAGVEKRTGDLFGNRDLLNIARNMARGLKGVENVYTQHQPLLFQTMESITRGRLRDVDYPFVGDHFQQGRPQEVVIFMVGGTTYEESRSVALQNATNSGVRFILGGTAVLNSKRFLKDLEEAQRISR 563
BLAST of CV887224 vs. ExPASy Swiss-Prot
Match: VPS45_MOUSE (Vacuolar protein sorting-associated protein 45 OS=Mus musculus GN=Vps45 PE=1 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.764e-33 Identity = 76/166 (45.78%), Postives = 108/166 (65.06%), Query Frame = -1 Query: 385 DRLRLVMLYALRYEKDSPVQLMQLFNKLASRSA--KYKPGLVQFLLKQAGVDKRTGDLYGNRDFMNIARNMARGLKGVENVYTQHQPLLFQTMESIIKGRLRDVDYPFLGNHFQQGRPQDVIIFIVGGTTYEESRSVALENANNSGIRFILGGSVILNSKRFLKDL 876 D +RLVMLYAL YE+ S L L L S+ KY+ LV +++ G R DL+ +D + I + +GLKGVENVYTQHQP L +T++ +IKGRL++ YP+LG + RPQD+I+FI+GG TYEE+ +V N G+R +LGG+ I N+K FL+++ Sbjct: 383 DAVRLVMLYALHYERHSSNSLPGLIVDLRSKGVAEKYRK-LVSAVVEYGGKRVRGSDLFSPKDAVAITKQFLKGLKGVENVYTQHQPFLHETLDHLIKGRLKENLYPYLGPSTLRDRPQDIIVFIIGGATYEEALTVYNLNRTTPGVRIVLGGTTIHNTKSFLEEV 547
BLAST of CV887224 vs. ExPASy Swiss-Prot
Match: VPS45_HUMAN (Vacuolar protein sorting-associated protein 45 OS=Homo sapiens GN=VPS45 PE=1 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 3.930e-33 Identity = 74/166 (44.58%), Postives = 108/166 (65.06%), Query Frame = -1 Query: 385 DRLRLVMLYALRYEKDSPVQLMQLFNKLASR--SAKYKPGLVQFLLKQAGVDKRTGDLYGNRDFMNIARNMARGLKGVENVYTQHQPLLFQTMESIIKGRLRDVDYPFLGNHFQQGRPQDVIIFIVGGTTYEESRSVALENANNSGIRFILGGSVILNSKRFLKDL 876 D RLVMLYAL YE+ S L L L ++ S KY+ LV +++ G R DL+ +D + I + +GLKGVENVYTQHQP L +T++ +IKGRL++ YP+LG + RPQD+I+F++GG TYEE+ +V N G+R +LGG+ + N+K FL+++ Sbjct: 383 DAARLVMLYALHYERHSSNSLPGLMMDLRNKGVSEKYRK-LVSAVVEYGGKRVRGSDLFSPKDAVAITKQFLKGLKGVENVYTQHQPFLHETLDHLIKGRLKENLYPYLGPSTLRDRPQDIIVFVIGGATYEEALTVYNLNRTTPGVRIVLGGTTVHNTKSFLEEV 547
BLAST of CV887224 vs. ExPASy Swiss-Prot
Match: VPS45_RAT (Vacuolar protein sorting-associated protein 45 OS=Rattus norvegicus GN=Vps45 PE=2 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 5.133e-33 Identity = 74/166 (44.58%), Postives = 108/166 (65.06%), Query Frame = -1 Query: 385 DRLRLVMLYALRYEKDSPVQLMQLFNKLASRSA--KYKPGLVQFLLKQAGVDKRTGDLYGNRDFMNIARNMARGLKGVENVYTQHQPLLFQTMESIIKGRLRDVDYPFLGNHFQQGRPQDVIIFIVGGTTYEESRSVALENANNSGIRFILGGSVILNSKRFLKDL 876 D +RLVMLYAL YE+ S L L L S+ KY+ LV +++ G R DL+ +D + I + +GLKGVENVYTQHQP L +T++ +IKG+L++ YP+LG + RPQD+I+F++GG TYEE+ +V N G+R +LGG+ I N+K FL+++ Sbjct: 383 DAVRLVMLYALHYERHSSNSLPGLIVDLRSKGVAEKYRK-LVSAVVEYGGKRVRGSDLFSPKDAVAITKQFLKGLKGVENVYTQHQPFLHETLDHLIKGKLKENLYPYLGPSTLRDRPQDIIVFVIGGATYEEALTVYNLNRTTPGVRIVLGGTTIHNTKSFLEEV 547
BLAST of CV887224 vs. ExPASy Swiss-Prot
Match: VPS45_DICDI (Vacuolar protein sorting-associated protein 45 OS=Dictyostelium discoideum GN=vps45 PE=1 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 4.345e-32 Identity = 77/171 (45.03%), Postives = 113/171 (66.08%), Query Frame = -1 Query: 373 DRLRLVMLYALRYEKDSPVQLMQLFNKLASRSAKYKP-GLVQFLLKQAGVDKRTGDLYGNRDFMNIARNMA-RGLKGVENVYTQHQPLLFQTMESIIKGRLRDVDYPFLGNHFQQGRPQDVIIFIVGGTTYEESRSVALENANNSGI-RFILGGSVILNSKRFLKDLEEAQ 876 D+L LV+LY++RYE ++ +L KL+S K GL+ L AG R GDL G ++ + AR++ RGL+GV N+YTQH+PLL ++SI+K +L++ YP+L + RPQDVIIF+VGG TYEE+ +V N+ N+G+ R +LGG+ ILN ++FL+DL Q Sbjct: 385 DKLVLVLLYSIRYEDG---RVWELKEKLSSIGIPPKEIGLIDTLRGYAGASLREGDLLGTKNIFSFARSVVKRGLQGVSNIYTQHKPLLHDILDSILKNKLKETSYPYLSTTQSRERPQDVIIFMVGGITYEEALTVYTFNSLNTGVCRVVLGGTSILNREQFLEDLSSTQ 552
BLAST of CV887224 vs. ExPASy Swiss-Prot
Match: YAB3_SCHPO (Putative vacuolar protein sorting-associated protein C2G11.03c OS=Schizosaccharomyces pombe GN=SPAC2G11.03c PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 2.089e-26 Identity = 65/168 (38.69%), Postives = 99/168 (58.93%), Query Frame = -1 Query: 385 RLRLVMLYALRYEKDSPVQLMQLFNKLASRSAK-YKPGLVQFLLKQAGVDKRTGDLYGNRDFMNIARNMARGLKGVENVYTQHQPLLFQTMESIIKGRLRDVDYPFLGNHFQ----QGRPQDVIIFIVGGTTYEESRSVALENANNSGIRFILGGSVILNSKRFLKDL 873 +LRL LY+LR+E+ P ++ L L + K ++ LL AG R GD++ + + AR+ +GL+GVENVY QH P L + +I+GRL++ +PFL + + +PQD+I+ IVGG TYEE+ V+ NA G+R IL G+ ILNS ++ D+ Sbjct: 383 KLRLAALYSLRFERIDPAKVSALQQMLIAGGVNPLKVSVIPTLLHVAGYSFRQGDVFPPSNLFSRARSGLKGLRGVENVYIQHNPFLKSILLDLIQGRLKETTHPFLNSETRAQTSNEKPQDIIVVIVGGATYEEAHFVSEFNATQPGVRIILAGTTILNSTAYIDDI 550
BLAST of CV887224 vs. ExPASy Swiss-Prot
Match: VPS45_YEAST (Vacuolar protein sorting-associated protein 45 OS=Saccharomyces cerevisiae GN=VPS45 PE=1 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 4.228e-11 Identity = 55/185 (29.73%), Postives = 90/185 (48.65%), Query Frame = -1 Query: 373 RLRLVMLYALRYEKDSPVQLMQLFNKLASRSAKYKPGLVQFLLKQAGVDKRTGDL-YGNRDFMNIARNMARGLKG--------VENVYTQHQPLLFQTMESIIKG-----RLRDVD---YPFLGNHFQQGRPQDVIIFIVGGTTYEESRSVALENAN-NSGIRFILGGSVILNSKRFLKDLEEAQ 873 +L+L +Y+L + S ++ QL L S + P V F K + R + N D +I +AR ENVY QH P + + + K R +++D + +GN + PQDVI+F++GG TYEE+R V N N+ +R +LGG+ IL++K ++ + A+ Sbjct: 397 KLKLACIYSLNNQTSSD-KIRQLVEIL---SQQLPPEDVNFFHKFKSLFSRQDKMTQSNHDKDDILTELARRFNSRMNSKSNTAENVYMQHIPEISSLLTDLSKNALFRDRFKEIDTQGHRVIGNQQSKDIPQDVILFVIGGVTYEEARLVHDFNGTMNNRMRVVLGGTSILSTKEYMDSIRSAK 577 The following BLAST results are available for this feature:
BLAST of CV887224 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CV887224 ID=CV887224; Name=CV887224; organism=Citrus sinensis; type=EST; length=879bpback to top |