CV887222

Overview
NameCV887222
Unique NameCV887222
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length841
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV887222 vs. ExPASy Swiss-Prot
Match: COMT1_MEDSA (Caffeic acid 3-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 253.447 bits (646), Expect = 1.126e-66
Identity = 115/217 (53.00%), Postives = 157/217 (72.35%), Query Frame = -3
Query:  183 ILEGGIAFNKAHGMQIYDYLGVDSRFNDVFNNGMLSHTSIVMEKVLESYKGFEHVKKLVDVXXXXXXXLNMIISKYPHIKGINYDLPYVIKDAPSYPGIEHVGGDLFENVPEADTIFMKWMLHNFDDEQTLKLLKNCYKALPDGGKLLNINSTISEVPQNSAASREISILDTILLIQIPHGRERTKQEYNELAIKAGFKGVSYECGVCNLYVMEFLK 833
            +L+GGI FNKA+GM  ++Y G D RFN VFN GM  H++I M+K+LE+Y GFE +K LVDV       +N I+SKYP IKGIN+DLP+VI+DAPSYPG+EHVGGD+F ++P+AD +FMKW+ H++ DE  LK LKNCY+ALPD GK++     +   P +S A++ +  +D I+L   P G+ERT++E+ +LA  AGF+G    C   N Y+MEFLK
Sbjct:  147 VLDGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYTGFEGLKSLVDVGGGTGAVINTIVSKYPTIKGINFDLPHVIEDAPSYPGVEHVGGDMFVSIPKADAVFMKWICHDWSDEHCLKFLKNCYEALPDNGKVIVAECILPVAPDSSLATKGVVHIDVIMLAHNPGGKERTQKEFEDLAKGAGFQGFKVHCNAFNTYIMEFLK 363          
BLAST of CV887222 vs. ExPASy Swiss-Prot
Match: COMT1_PRUDU (Caffeic acid 3-O-methyltransferase OS=Prunus dulcis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 251.521 bits (641), Expect = 4.280e-66
Identity = 118/217 (54.38%), Postives = 155/217 (71.43%), Query Frame = -3
Query:  183 ILEGGIAFNKAHGMQIYDYLGVDSRFNDVFNNGMLSHTSIVMEKVLESYKGFEHVKKLVDVXXXXXXXLNMIISKYPHIKGINYDLPYVIKDAPSYPGIEHVGGDLFENVPEADTIFMKWMLHNFDDEQTLKLLKNCYKALPDGGKLLNINSTISEVPQNSAASREISILDTILLIQIPHGRERTKQEYNELAIKAGFKGVSYECGVCNLYVMEFLK 833
            +LEGGI FNKA+GM  ++Y G D RFN VFN GM  H++I M+K+LE+YKGFE +  +VDV       LNMI+SKYP IKGIN+DLP+VI+DAP YPG+EHVGGD+F +VP+ D IFMKW+ H++ DE  LK LKNCY ALPD GK++     +   P +S A++ +  +D I+L   P G+ERT+QE+  LA  AGF+G +  C   N YV+EFLK
Sbjct:  147 VLEGGIPFNKAYGMTAFEYHGTDPRFNKVFNRGMADHSTITMKKILETYKGFEGLTSVVDVGGGTGAVLNMIVSKYPSIKGINFDLPHVIEDAPQYPGVEHVGGDMFVSVPKGDAIFMKWICHDWSDEHCLKFLKNCYAALPDNGKVILGECILPVAPDSSLATKGVVHIDVIMLAHNPGGKERTEQEFQALAKGAGFQGFNVACSAFNTYVIEFLK 363          
BLAST of CV887222 vs. ExPASy Swiss-Prot
Match: COMT1_ROSCH (Caffeic acid 3-O-methyltransferase OS=Rosa chinensis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 1.245e-65
Identity = 114/217 (52.53%), Postives = 154/217 (70.97%), Query Frame = -3
Query:  183 ILEGGIAFNKAHGMQIYDYLGVDSRFNDVFNNGMLSHTSIVMEKVLESYKGFEHVKKLVDVXXXXXXXLNMIISKYPHIKGINYDLPYVIKDAPSYPGIEHVGGDLFENVPEADTIFMKWMLHNFDDEQTLKLLKNCYKALPDGGKLLNINSTISEVPQNSAASREISILDTILLIQIPHGRERTKQEYNELAIKAGFKGVSYECGVCNLYVMEFLK 833
            +L+GGI FNKA+GM  +DY G D RFN VFN GM  H++I M+K+LE+YKGFE +  +VDV       +NMI+SKYP IKGIN+DLP+VI+DAP YPG++HVGGD+F +VP+ D IFMKW+ H++ DE  LK LKNCY ALPD GK++     +   P  S A++ +  +D ++L   P G+ERT+QE+  LA  +GF+G+   C   N YV+EFLK
Sbjct:  147 VLDGGIPFNKAYGMTAFDYHGTDPRFNKVFNKGMADHSTITMKKILETYKGFEGLTSIVDVGGGTGAVVNMIVSKYPSIKGINFDLPHVIEDAPQYPGVQHVGGDMFVSVPKGDAIFMKWICHDWSDEHCLKFLKNCYAALPDNGKVILGECILPVAPDTSLATKGVVHIDVVMLAHNPGGKERTEQEFEALAKGSGFQGIRVACNAFNTYVIEFLK 363          
BLAST of CV887222 vs. ExPASy Swiss-Prot
Match: OMT1_ARATH (Quercetin 3-O-methyltransferase 1 OS=Arabidopsis thaliana GN=OMT1 PE=1 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 1.165e-63
Identity = 111/217 (51.15%), Postives = 159/217 (73.27%), Query Frame = -3
Query:  183 ILEGGIAFNKAHGMQIYDYLGVDSRFNDVFNNGMLSHTSIVMEKVLESYKGFEHVKKLVDVXXXXXXXLNMIISKYPHIKGINYDLPYVIKDAPSYPGIEHVGGDLFENVPEADTIFMKWMLHNFDDEQTLKLLKNCYKALPDGGKLLNINSTISEVPQNSAASREISILDTILLIQIPHGRERTKQEYNELAIKAGFKGVSYECGVCNLYVMEFLK 833
            IL+GGI FNKA+GM  ++Y G D RFN VFNNGM +H++I M+K+LE+YKGFE +  LVDV       L MI+SKYP++KGIN+DLP+VI+DAPS+PGIEHVGGD+F +VP+ D IFMKW+ H++ DE  +K LKNCY++LP+ GK++     + E P +S +++++  +D I+L   P G+ERT++E+  LA  +GFKG+   C    + ++E LK
Sbjct:  145 ILDGGIPFNKAYGMSAFEYHGTDPRFNKVFNNGMSNHSTITMKKILETYKGFEGLTSLVDVGGGIGATLKMIVSKYPNLKGINFDLPHVIEDAPSHPGIEHVGGDMFVSVPKGDAIFMKWICHDWSDEHCVKFLKNCYESLPEDGKVILAECILPETPDSSLSTKQVVHVDCIMLAHNPGGKERTEKEFEALAKASGFKGIKVVCDAFGVNLIELLK 361          
BLAST of CV887222 vs. ExPASy Swiss-Prot
Match: COMT1_POPKI (Caffeic acid 3-O-methyltransferase 1 OS=Populus kitakamiensis GN=HOMT1 PE=3 SV=1)

HSP 1 Score: 242.662 bits (618), Expect = 1.988e-63
Identity = 114/217 (52.53%), Postives = 152/217 (70.05%), Query Frame = -3
Query:  183 ILEGGIAFNKAHGMQIYDYLGVDSRFNDVFNNGMLSHTSIVMEKVLESYKGFEHVKKLVDVXXXXXXXLNMIISKYPHIKGINYDLPYVIKDAPSYPGIEHVGGDLFENVPEADTIFMKWMLHNFDDEQTLKLLKNCYKALPDGGKLLNINSTISEVPQNSAASREISILDTILLIQIPHGRERTKQEYNELAIKAGFKGVSYECGVCNLYVMEFLK 833
            ILEGGI FNKA+GM  ++Y G D RFN VFN GM  H++I M+K+LE+YKGFE +  LVDV       +N I+SKYP IKGIN+DLP+VI+DAPSYPG+EHVGGD+F +VP AD +FMKW+ H++ D   LK LKNCY ALP+ GK++ +   +   P  S A++ +  +D I+L   P G+ERT++E+  LA  AGF+G    C   N +V+EF K
Sbjct:  147 ILEGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYKGFEGLTSLVDVGGGTGAVVNTIVSKYPSIKGINFDLPHVIEDAPSYPGVEHVGGDMFVSVPNADAVFMKWICHDWSDAHCLKFLKNCYDALPENGKVILVECILPVAPDTSLATKGVVHVDVIMLAHNPGGKERTEKEFEGLANGAGFQGFEVMCCAFNTHVIEFRK 363          
BLAST of CV887222 vs. ExPASy Swiss-Prot
Match: COMT1_POPTM (Caffeic acid 3-O-methyltransferase 1 OS=Populus tremuloides GN=OMT1 PE=1 SV=1)

HSP 1 Score: 241.891 bits (616), Expect = 3.391e-63
Identity = 113/217 (52.07%), Postives = 153/217 (70.51%), Query Frame = -3
Query:  183 ILEGGIAFNKAHGMQIYDYLGVDSRFNDVFNNGMLSHTSIVMEKVLESYKGFEHVKKLVDVXXXXXXXLNMIISKYPHIKGINYDLPYVIKDAPSYPGIEHVGGDLFENVPEADTIFMKWMLHNFDDEQTLKLLKNCYKALPDGGKLLNINSTISEVPQNSAASREISILDTILLIQIPHGRERTKQEYNELAIKAGFKGVSYECGVCNLYVMEFLK 833
            IL+GGI FNKA+GM  ++Y G D RFN VFN GM  H++I M+K+LE+YKGFE +  LVDV       +N I+SKYP IKGIN+DLP+VI+DAPSYPG+EHVGGD+F +VP+AD +FMKW+ H++ D   LK LKNCY ALP+ GK++ +   +   P  S A++ +  +D I+L   P G+ERT++E+  LA  AGF+G    C   N +V+EF K
Sbjct:  147 ILDGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYKGFEGLTSLVDVGGGTGAVVNTIVSKYPSIKGINFDLPHVIEDAPSYPGVEHVGGDMFVSVPKADAVFMKWICHDWSDAHCLKFLKNCYDALPENGKVILVECILPVAPDTSLATKGVVHVDVIMLAHNPGGKERTEKEFEGLAKGAGFQGFEVMCCAFNTHVIEFRK 363          
BLAST of CV887222 vs. ExPASy Swiss-Prot
Match: COMT1_CLABR (Caffeic acid 3-O-methyltransferase OS=Clarkia breweri GN=COMT PE=1 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 4.429e-63
Identity = 115/217 (53.00%), Postives = 151/217 (69.59%), Query Frame = -3
Query:  183 ILEGGIAFNKAHGMQIYDYLGVDSRFNDVFNNGMLSHTSIVMEKVLESYKGFEHVKKLVDVXXXXXXXLNMIISKYPHIKGINYDLPYVIKDAPSYPGIEHVGGDLFENVPEADTIFMKWMLHNFDDEQTLKLLKNCYKALPDGGKLLNINSTISEVPQNSAASREISILDTILLIQIPHGRERTKQEYNELAIKAGFKGVSYECGVCNLYVMEFLK 833
            IL+GGI FNKA+GM  ++Y G D RFN VFN GM  H++I M+K+ E Y GFE +  +VDV       L+MI++KYP IKGIN+DLP+VI+DAP YPG+EHVGGD+F +VP+ D IFMKW+ H++ DE  LK LKNCY ALP+ GK++     +   P  S A++ +  +D I+L   P G+ERT++E+  LAI AGFKG    C   N YVMEFLK
Sbjct:  152 ILDGGIPFNKAYGMTAFEYHGTDPRFNKVFNRGMSDHSTITMKKIFEMYTGFEALNTIVDVGGGTGAVLSMIVAKYPSIKGINFDLPHVIEDAPIYPGVEHVGGDMFVSVPKGDAIFMKWICHDWSDEHCLKFLKNCYAALPEHGKVIVAECILPLSPDPSLATKGVIHIDAIMLAHNPGGKERTEKEFEALAIGAGFKGFKVACCAFNTYVMEFLK 368          
BLAST of CV887222 vs. ExPASy Swiss-Prot
Match: COMT1_OCIBA (Caffeic acid 3-O-methyltransferase 1 OS=Ocimum basilicum GN=COMT1 PE=2 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 5.784e-63
Identity = 111/217 (51.15%), Postives = 153/217 (70.51%), Query Frame = -3
Query:  183 ILEGGIAFNKAHGMQIYDYLGVDSRFNDVFNNGMLSHTSIVMEKVLESYKGFEHVKKLVDVXXXXXXXLNMIISKYPHIKGINYDLPYVIKDAPSYPGIEHVGGDLFENVPEADTIFMKWMLHNFDDEQTLKLLKNCYKALPDGGKLLNINSTISEVPQNSAASREISILDTILLIQIPHGRERTKQEYNELAIKAGFKGVSYECGVCNLYVMEFLK 833
            +++GGI FNKA+GM  ++Y G D RFN VFN GM +H++I M+K+LE+Y GF+ +K +VDV       LNMI+SKYP IKGIN+DLP+VI+DAPSYPG+EHVGGD+F +VP+ D IFMKW+ H++ DE  +K LKNCY ALP  GK++     + E P    A++ +  +D I+L   P G+ERT++E+  LA  AGFK  +  C   N ++ME LK
Sbjct:  145 VVDGGIPFNKAYGMTAFEYHGTDPRFNKVFNQGMSNHSTITMKKILETYTGFDGLKTVVDVGGGTGATLNMIVSKYPSIKGINFDLPHVIEDAPSYPGVEHVGGDMFVSVPKGDAIFMKWICHDWSDEHCVKFLKNCYDALPQNGKVILAECVLPEAPDTGLATKNVVHIDVIMLAHNPGGKERTEKEFQGLAKAAGFKQFNKACCAYNTWIMELLK 361          
BLAST of CV887222 vs. ExPASy Swiss-Prot
Match: COMT3_POPKI (Caffeic acid 3-O-methyltransferase 3 OS=Populus kitakamiensis GN=HOMT3 PE=3 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 3.749e-62
Identity = 112/217 (51.61%), Postives = 152/217 (70.05%), Query Frame = -3
Query:  183 ILEGGIAFNKAHGMQIYDYLGVDSRFNDVFNNGMLSHTSIVMEKVLESYKGFEHVKKLVDVXXXXXXXLNMIISKYPHIKGINYDLPYVIKDAPSYPGIEHVGGDLFENVPEADTIFMKWMLHNFDDEQTLKLLKNCYKALPDGGKLLNINSTISEVPQNSAASREISILDTILLIQIPHGRERTKQEYNELAIKAGFKGVSYECGVCNLYVMEFLK 833
            ILEGGI FNKA+GM  ++Y G D RFN VFN GM  H+ + M+K+LESYKGFE +  LVDV       ++ I+SKYP IKGIN+DLP+VI DAP++PG+E+VGGD+F +VP+AD +FMKW+ H++ DE  L+LLKNCY ALP+ GK++ +   +   P  S A++ +  +D I+L   P G+ERT +E+  LA  AGFKG    C   N +V+EF K
Sbjct:  146 ILEGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSKMAMKKILESYKGFEGLASLVDVGGGTGAVVSTIVSKYPSIKGINFDLPHVIADAPAFPGVENVGGDMFVSVPKADAVFMKWICHDWSDEHCLRLLKNCYDALPENGKVILVECILPVAPDTSLATKGVMHVDAIMLAHNPGGKERTDKEFEGLARGAGFKGFEVMCCAFNTHVIEFRK 362          
BLAST of CV887222 vs. ExPASy Swiss-Prot
Match: COMT1_COFCA (Caffeic acid 3-O-methyltransferase OS=Coffea canephora PE=2 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 6.395e-62
Identity = 110/217 (50.69%), Postives = 153/217 (70.51%), Query Frame = -3
Query:  183 ILEGGIAFNKAHGMQIYDYLGVDSRFNDVFNNGMLSHTSIVMEKVLESYKGFEHVKKLVDVXXXXXXXLNMIISKYPHIKGINYDLPYVIKDAPSYPGIEHVGGDLFENVPEADTIFMKWMLHNFDDEQTLKLLKNCYKALPDGGKLLNINSTISEVPQNSAASREISILDTILLIQIPHGRERTKQEYNELAIKAGFKGVSYECGVCNLYVMEFLK 833
            +L+GGI FNKA+GM  ++Y G D RFN VFN GM +H++I M+K+LE Y+GFE +K +VDV       LNMIISKYP IKGIN++LP+V++DAPS+ G+EHVGGD+F +VP+ D IFMKW+ H++ D+   KLLKNCY+ALPD GK++     + E P  S A++ +  +D ++L   P G+ERT++E+  LA  AGFK     C   N ++ME  K
Sbjct:  134 VLDGGIPFNKAYGMTAFEYHGTDPRFNKVFNQGMSNHSTITMKKILEVYRGFEGLKTVVDVGGGTGATLNMIISKYPTIKGINFELPHVVEDAPSHSGVEHVGGDMFVSVPKGDAIFMKWICHDWSDDHCRKLLKNCYQALPDNGKVILAECVLPEAPDTSLATQNVVHVDVVMLAHNPGGKERTEKEFEALAKGAGFKEFRKVCSAVNTWIMELCK 350          
The following BLAST results are available for this feature:
BLAST of CV887222 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
COMT1_MEDSA1.126e-6653.00Caffeic acid 3-O-methyltransferase OS=Medicago sat... [more]
COMT1_PRUDU4.280e-6654.38Caffeic acid 3-O-methyltransferase OS=Prunus dulci... [more]
COMT1_ROSCH1.245e-6552.53Caffeic acid 3-O-methyltransferase OS=Rosa chinens... [more]
OMT1_ARATH1.165e-6351.15Quercetin 3-O-methyltransferase 1 OS=Arabidopsis t... [more]
COMT1_POPKI1.988e-6352.53Caffeic acid 3-O-methyltransferase 1 OS=Populus ki... [more]
COMT1_POPTM3.391e-6352.07Caffeic acid 3-O-methyltransferase 1 OS=Populus tr... [more]
COMT1_CLABR4.429e-6353.00Caffeic acid 3-O-methyltransferase OS=Clarkia brew... [more]
COMT1_OCIBA5.784e-6351.15Caffeic acid 3-O-methyltransferase 1 OS=Ocimum bas... [more]
COMT3_POPKI3.749e-6251.61Caffeic acid 3-O-methyltransferase 3 OS=Populus ki... [more]
COMT1_COFCA6.395e-6250.69Caffeic acid 3-O-methyltransferase OS=Coffea canep... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_030A05_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_030_T7_A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV887222 ID=CV887222; Name=CV887222; organism=Citrus sinensis; type=EST; length=841bp
TTTTTTTTTTTTTTTTATACGGGAATCAATCTCCCTATAAGAGATTTATT
ATTGATAAAACGAAAGAGATTACATAAGAGAAGCCCTCAATCCAAAGGAA
AGAGATAACAAGACAAACCGGAAATTGAAAACAACCCAAGAAAGCTAAGG
AGATCTTTCCGAATAGAGAAAAAAGCAATCTATTTCAAGAACTCCATAAC
ATATAAATTACATACACCACATTCGTAGCTGACACCTTTAAATCCAGCTT
TAATTGCCAATTCATTGTATTCTTGTTTGGTGCGCTCTCTTCCATGAGGA
ATTTGGATCAACAAAATTGTATCCAAAATAGAGATTTCCCTTGAAGCCGC
ACTATTTTGAGGCACTTCTGAAATTGTTGAATTAATATTGAGCAGCTTCC
CACCATCTGGAAGAGCTTTGTAACAATTCTTCAACAATTTCAAAGTTTGC
TCATCATCAAAATTGTGAAGCATCCACTTCATGAAAATGGTATCCGCCTC
AGGAACATTTTCGAATAAATCTCCACCCACGTGTTCGATGCCAGGATAAG
ATGGGGCATCTTTAATGACATAAGGCAGATCATAATTAATACCCTTAATA
TGAGGGTATTTGGAAATTATCATGTTCAGGGTAGTTCCTAAGCCGCCGCC
AACATCAACAAGCTTCTTAACATGCTCAAAGCCTTTGTATGATTCTAGGA
CCTTCTCCATGACAATAGAAGTGTGGCTTAACATTCCATTATTGAAAACA
TCATTGAACCTTGAGTCGACGCCTAGGTAATCATAGATTTGCATTCCGTG
CGCTTTATTAAACGCAATTCCTCCTTCAAGAATCTGCTTTT
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